当前蛋白身份:P02751 重新检索
本组结构的主要差异维度
构建体不同 突变/修饰不同 组装状态不同 配体/离子不同 实验方法不同 实验环境不同 结构质量指标不同

差异标签只比较当前检索结果;所有PDB和assembly原始记录仍分别保留。

相关结构差异明细

一行代表一个 PDB 条目中的一个 biological assembly;同一蛋白的多个单体会分别列出。

PDB 条目 Assembly / 聚集状态 构建体 突变与修饰 配体、离子与非聚合物 实验方法 实验环境 结构质量
1E88 Solution structure of 6F11F22F2, a compact three-module fragment of the gelatin-binding domain of human fibronectin 提交 2000-09-18 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 305–464(160 aa) 片段:6F11F22F2, RESIDUES 305-464
未记录 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 SOLUTION NMR
NMR测量条件 pH 4.5;298 K
NMR样品组成 2MM 6F11F22F2, 20MM PHOSPHATE BUFFER
分辨率未提供
1E8B Solution structure of 6F11F22F2, a compact three-module fragment of the gelatin-binding domain of human fibronectin 提交 2000-09-18 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 305–464(160 aa) 片段:6F11F22F2, RESIDUES 305-464
未记录 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 SOLUTION NMR
NMR测量条件 pH 4.5;298 K
NMR样品组成 2MM 6F11F22F2, 20MM PHOSPHATE BUFFER
分辨率未提供
1FBR FOURTH AND FIFTH FIBRONECTIN TYPE I MODULE PAIR 提交 1995-08-08 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 183–275(93 aa)
未记录 未记录非水小分子 SOLUTION NMR mmCIF 未提供已读取条件 分辨率未提供
1FNA CRYSTAL STRUCTURE OF THE TENTH TYPE III CELL ADHESION MODULE OF HUMAN FIBRONECTIN 提交 1994-01-11 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 1452–1542(91 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION mmCIF 未提供已读取条件 分辨率 1.80 Å
1FNF FRAGMENT OF HUMAN FIBRONECTIN ENCOMPASSING TYPE-III REPEATS 7 THROUGH 10 提交 1995-09-30 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 1173–1540(368 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 pH 5.8;pH 5.8
分辨率 2.00 Å R-free 0.308
1FNH CRYSTAL STRUCTURE OF HEPARIN AND INTEGRIN BINDING SEGMENT OF HUMAN FIBRONECTIN 提交 1999-01-28 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 1721–1991(271 aa) 片段:HEPARIN AND INTEGRIN BINDING
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 pH 7.5;CRYSTALLIZATION CONDITIONS: 0.1M HEPES, PH7.5, 0.8M NA, K TARTRATE
分辨率 2.80 Å R-free 0.295
1J8K NMR STRUCTURE OF THE FIBRONECTIN EDA DOMAIN, NMR, 20 STRUCTURES 提交 2001-05-22 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 1631–1724(94 aa) 片段:EXTRA DOMAIN 2 (RESIDUES 1631-1724)
未记录 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 7;293 K;离子强度(mmCIF原始值)400mM sodium sulfate;压力 1
NMR样品组成 2mM EDA U-15N,13C; 50mM phosphate buffer, 400mM sodium sulfate; 90% H2O, 10% D2O | 90% H2O/10% D2O
分辨率未提供
1O9A Solution structure of the complex of 1F12F1 from fibronectin with B3 from FnBB from S. dysgalactiae 提交 2002-12-11 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 48–140(93 aa) 片段:N-TERMINAL F1 MODULE PAIR, RESIDUES 48-140
未记录 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 5;298 K
分辨率未提供
1OWW Solution structure of the first type III module of human fibronectin determined by 1H, 15N NMR spectroscopy 提交 2003-03-31 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 608–701(94 aa) 片段:Residues 608-701 of SWS P02751
未记录 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 6;313 K;离子强度(mmCIF原始值)unbuffered;压力 ambient
NMR样品组成 1-2 mM [U-15N] protein, 90% H2O/10% D2O | 90% H2O/10% D2O
分辨率未提供
1Q38 Anastellin 提交 2003-07-28 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 631–705(75 aa) 片段:Type 3 (FN3) domain
未记录 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 7;298 K;离子强度(mmCIF原始值)150;压力 ambient
NMR样品组成 1.5 mM anastellin U-15N, 10 mM Na2HPO4, 1.8 mM KH2PO4, 140 mM NaCl, 2.7 mM KCl, 2 mM CHAPS | 90% H2O/10% D2O
NMR样品组成 1.5 mM anastellin U-15N,13C, 10 mM Na2HPO4, 1.8 mM KH2PO4, 140 mM NaCl, 2.7 mM KCl, 2 mM CHAPS | 90% H2O/10% D2O
分辨率未提供
1QGB SOLUTION STRUCTURE OF THE N-TERMINAL F1 MODULE PAIR FROM HUMAN FIBRONECTIN 提交 1999-04-21 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 48–140(93 aa) 片段:N-TERMINAL F1 MODULE PAIR
未记录 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 4;310 K
NMR样品组成 2.2 mM [U-15N] 1F1-2F1, 90% H2O/10% D2O | 90% H2O/10% D2O
分辨率未提供
1QO6 Solution structure of a pair of modules from the gelatin-binding domain of fibronectin 提交 1999-11-04 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 305–405(101 aa) 片段:FIBRONECTIN TYPE-I AND FIBRONECTIN TYPE-II MODULE PAIR FROM COLLAGEN-BINDING DOMAIN
未记录 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 4.5;310 K;压力 1
分辨率未提供
1TTF THE THREE-DIMENSIONAL STRUCTURE OF THE TENTH TYPE III MODULE OF FIBRONECTIN: AN INSIGHT INTO RGD-MEDIATED INTERACTIONS 提交 1993-07-14 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 1447–1540(94 aa)
未记录 未记录非水小分子 SOLUTION NMR mmCIF 未提供已读取条件 分辨率未提供
1TTG THE THREE-DIMENSIONAL STRUCTURE OF THE TENTH TYPE III MODULE OF FIBRONECTIN: AN INSIGHT INTO RGD-MEDIATED INTERACTIONS 提交 1993-07-14 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 1447–1540(94 aa)
未记录 未记录非水小分子 SOLUTION NMR mmCIF 未提供已读取条件 分辨率未提供
2CG6 Second and third fibronectin type I module pair (crystal form I). 提交 2006-02-27 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 93–182(90 aa) 片段:RESIDUES 93-182 (62-151 IN COORDINATES)
未记录 SO4 SULFATE ION × 2 X-RAY DIFFRACTION
X-ray结晶条件 pH 4.5;0.2 M AMMONIUM SULPHATE, 0.1M NA ACETATE PH 4.5, 2% MPD, 5% PEG MME 550
分辨率 1.55 Å R-free 0.231
2CG7 SECOND AND THIRD FIBRONECTIN TYPE I MODULE PAIR (CRYSTAL FORM II). 提交 2006-02-27 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 93–182(90 aa) 片段:RESIDUES 93-182 (62-151 IN COORDINATES)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 pH 7;WATER AND 0.02% SODIUM AZIDE, pH 7.00
分辨率 1.20 Å R-free 0.219
2CK2 Structure of core-swapped mutant of fibronectin 提交 2006-04-10 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 1447–1542(96 aa) 片段:RESIDUES 1447-1542
链 B 1447–1542(96 aa) 片段:RESIDUES 1447-1542
突变:YES 突变:YES ACE ACETYL GROUP × 2 X-RAY DIFFRACTION
X-ray结晶条件 pH 5.1;50% PEG-400, 0.1 M ACTEATE, 0.2 M LITHIUM SULPHATE, PH 5.1
分辨率 2.00 Å R-free 0.268
2CKU Solution structure of 2F13F1 from human fibronectin 提交 2006-04-21 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 93–182(90 aa) 片段:2ND AND 3RD F1 MODULES, RESIDUES 93-182 (62-151 IN COORDINATES)
未记录 未记录非水小分子 SOLUTION NMR
NMR测量条件 298 K
分辨率未提供
2EC3 Solution structure of the 11th FN1 domain from human Fibronectin 1 提交 2007-02-09 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 2239–2299(61 aa) 片段:Fibronectin type-I
未记录 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 7;298 K;离子强度(mmCIF原始值)120mM;压力 ambient
NMR样品组成 1.14 mM 13C, 15N-labeled protein; 20mM d-Tris-HCl (pH7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O | 90% H2O/10% D2O
分辨率未提供
2FN2 SOLUTION NMR STRUCTURE OF THE GLYCOSYLATED SECOND TYPE TWO MODULE OF FIBRONECTIN, 20 STRUCTURES 提交 1997-08-06 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 375–433(59 aa) 片段:RESIDUES 375 - 433
未记录 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 SOLUTION NMR
NMR测量条件 pH 4.5;298 K;离子强度(mmCIF原始值)0 mM;压力 10E+5 PA
NMR样品组成 H2O/D2O(9:1) OR D2O
分辨率未提供
2FNB NMR STRUCTURE OF THE FIBRONECTIN ED-B DOMAIN, NMR, 20 STRUCTURES 提交 1998-12-16 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 1261–1355(95 aa) 片段:TYPE III DOMAIN
未记录 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 7;298 K;离子强度(mmCIF原始值)63 mM;压力 1
分辨率未提供
2H41 Solution structure of the second type III domain of human Fibronectin: minimized average structure 提交 2006-05-23 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 721–809(89 aa) 片段:Fibronectin type-III 2(2F3)
未记录 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 7;303 K;离子强度(mmCIF原始值)20mM NaCl, 20mM Na2HPO4;压力 ambient
NMR样品组成 2.5mM 2F3 U-15N, 20mM NaPi pH 7.0, 20mM NaCl, 95% H2O, 5% D2O | 95% H2O/5% D2O
NMR样品组成 2mM 2F3 U-13C,15N, 20mM NaPi pH 7.0, 20mM NaCl, 95% H2O, 5% D2O | 95% H2O/5% D2O
NMR样品组成 2mM 2F3 U-13C,15N, 20mM NaPi pH 7.0, 20mM NaCl, 100% D2O | 100% D2O
NMR样品组成 1mM 2F3 U-15N, 20mM NaPi pH 7.0, 20mM NaCl, 4% Radially compressed polyacrylamide gel, 95% H2O, 5% D2O | 95% H2O/5% D2O
分辨率未提供
2H45 Solution structure of the second type III domain of human Fibronectin: ensemble of 25 structures 提交 2006-05-23 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 721–809(89 aa) 片段:Fibronectin type-III 2(2F3)
未记录 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 7;303 K;离子强度(mmCIF原始值)20mM NaCl, 20mM Na2HPO4;压力 ambient
NMR样品组成 2.5mM 2F3 U-15N, 20mM NaPi pH 7.0, 20mM NaCl, 95% H2O, 5% D2O | 95% H2O/5% D2O
NMR样品组成 2mM 2F3 U-13C,15N, 20mM NaPi pH 7.0, 20mM NaCl, 95% H2O, 5% D2O | 95% H2O/5% D2O
NMR样品组成 2mM 2F3 U-13C,15N, 20mM NaPi pH 7.0, 20mM NaCl, 100% D2O | 100% D2O
NMR样品组成 1mM 2F3 U-15N, 20mM NaPi pH 7.0, 20mM NaCl, 4% Radially compressed polyacrylamide gel, 95% H2O, 5% D2O | 95% H2O/5% D2O
分辨率未提供
2HA1 Complex of the first and second type III domains of human Fibronectin in solution 提交 2006-06-12 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 609–809(201 aa) 片段:Fibronectin first and second type III domain pair (1F3-2F3)
未记录 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 7;303 K;离子强度(mmCIF原始值)150mM NaCl, 20mM Na2HPO3;压力 ambient
NMR样品组成 1.0mM 1F3-2F3 U-15N, 150mM NaCl, 20mM NaPi pH 7.0, 95% H2O, 5% D2O | 95% H2O/5% D2O
NMR样品组成 1.0mM 1F3-2F3 U-15N, 13C, 150mM NaCl, 20mM NaPi pH 7.0, 95% H2O, 5% D2O | 95% H2O/5% D2O
NMR样品组成 0.6mM 1F3-2F3 U-15N, 150mM NaCl, 20mM NaPi pH 7.0, 4% Radially compressed polyacrylamide gel, 95% H2O, 5% D2O | 95% H2O/5% D2O
分辨率未提供
2N1K Structure of the Third Type III Domain from Human Fibronectin 提交 2015-04-04 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 808–905(98 aa) 片段:third FN3 domain (UNP residues 808-905)
未记录 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 7.5;298.15 K;离子强度(mmCIF原始值)0.17;压力 ambient
NMR样品组成 0.6 mM [U-99% 13C; U-99% 15N] 3FN3, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 140 mM sodium chloride, 2.7 mM potassium chloride, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR样品组成 0.6 mM [U-99% 15N] 3FN3, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 140 mM sodium chloride, 2.7 mM potassium chloride, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR样品组成 0.6 mM 3FN3, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 140 mM sodium chloride, 2.7 mM potassium chloride, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR样品组成 0.6 mM 3FN3, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 140 mM sodium chloride, 2.7 mM potassium chloride, 100% D2O | 100% D2O
NMR样品组成 0.9 mM [U-99% 13C; U-99% 15N] 3FN3, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 140 mM sodium chloride, 2.7 mM potassium chloride, 0.9 mM 3FN3, 90% H2O/10% D2O | 90% H2O/10% D2O
分辨率未提供
2OCF Human estrogen receptor alpha ligand-binding domain in complex with estradiol and the E2#23 FN3 monobody 提交 2006-12-20 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 D 1447–1540(94 aa) 片段:E2#23 FN3 MONOBODY, Fibronectin type III Domain 10, Residues 1447-1540
突变:R1452T, D1453K, R1524L, G1525R, D1526L, S1527M, P1528L, S1530G EST ESTRADIOL × 2 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 8;289 K;2.5M NaCl, 0.1M Imidazole, pH 8.0, 0.2M Zn(OAc)2, VAPOR DIFFUSION, SITTING DROP, temperature 289K
分辨率 2.95 Å R-free 0.251
2RKY Crystal structure of the fourth and fifth fibronectin F1 modules in complex with a fragment of staphylococcus aureus fnbpa-1 提交 2007-10-18 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 183–275(93 aa) 片段:UNP residues 183-275
未记录 SCN THIOCYANATE ION × 2 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 8.5;291 K;100mM Tris-HCl, pH8.5, 0.15M Potassium thiocyanate, 20% PEG400, VAPOR DIFFUSION, HANGING DROP, temperature 291K
分辨率 1.80 Å R-free 0.216
2RKY Crystal structure of the fourth and fifth fibronectin F1 modules in complex with a fragment of staphylococcus aureus fnbpa-1 提交 2007-10-18 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 C 183–275(93 aa) 片段:UNP residues 183-275
未记录 SCN THIOCYANATE ION × 3 K POTASSIUM ION × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 8.5;291 K;100mM Tris-HCl, pH8.5, 0.15M Potassium thiocyanate, 20% PEG400, VAPOR DIFFUSION, HANGING DROP, temperature 291K
分辨率 1.80 Å R-free 0.216
2RKZ Crystal structure of the second and third fibronectin f1 modules in complex with a fragment of staphylococcus aureus fnbpa-1 提交 2007-10-18 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 93–182(90 aa) 片段:UNP residues 93-182
未记录 SIN SUCCINIC ACID × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 7;291 K;0.8M SUCCINIC ACID, pH7.0, VAPOR DIFFUSION, SITTING DROP, temperature 291K
分辨率 2.00 Å R-free 0.261
2RKZ Crystal structure of the second and third fibronectin f1 modules in complex with a fragment of staphylococcus aureus fnbpa-1 提交 2007-10-18 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 B 93–182(90 aa) 片段:UNP residues 93-182
未记录 SIN SUCCINIC ACID × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 7;291 K;0.8M SUCCINIC ACID, pH7.0, VAPOR DIFFUSION, SITTING DROP, temperature 291K
分辨率 2.00 Å R-free 0.261
2RKZ Crystal structure of the second and third fibronectin f1 modules in complex with a fragment of staphylococcus aureus fnbpa-1 提交 2007-10-18 Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 C 93–182(90 aa) 片段:UNP residues 93-182
未记录 SIN SUCCINIC ACID × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 7;291 K;0.8M SUCCINIC ACID, pH7.0, VAPOR DIFFUSION, SITTING DROP, temperature 291K
分辨率 2.00 Å R-free 0.261
2RKZ Crystal structure of the second and third fibronectin f1 modules in complex with a fragment of staphylococcus aureus fnbpa-1 提交 2007-10-18 Assembly 4 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 D 93–182(90 aa) 片段:UNP residues 93-182
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 7;291 K;0.8M SUCCINIC ACID, pH7.0, VAPOR DIFFUSION, SITTING DROP, temperature 291K
分辨率 2.00 Å R-free 0.261
2RKZ Crystal structure of the second and third fibronectin f1 modules in complex with a fragment of staphylococcus aureus fnbpa-1 提交 2007-10-18 Assembly 5 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 E 93–182(90 aa) 片段:UNP residues 93-182
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 7;291 K;0.8M SUCCINIC ACID, pH7.0, VAPOR DIFFUSION, SITTING DROP, temperature 291K
分辨率 2.00 Å R-free 0.261
2RKZ Crystal structure of the second and third fibronectin f1 modules in complex with a fragment of staphylococcus aureus fnbpa-1 提交 2007-10-18 Assembly 6 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 F 93–182(90 aa) 片段:UNP residues 93-182
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 7;291 K;0.8M SUCCINIC ACID, pH7.0, VAPOR DIFFUSION, SITTING DROP, temperature 291K
分辨率 2.00 Å R-free 0.261
2RL0 Crystal structure of the fourth and fifth fibronectin F1 modules in complex with a fragment of staphylococcus aureus fnbpa-5 提交 2007-10-18 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 184–272(89 aa) 片段:UNP residues 184-272
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 6.2;291 K;0.2M NACL, 0.1M BIS TRIS, 14% PEG3350, pH6.2, VAPOR DIFFUSION, SITTING DROP, temperature 291K
分辨率 2.00 Å R-free 0.266
2RL0 Crystal structure of the fourth and fifth fibronectin F1 modules in complex with a fragment of staphylococcus aureus fnbpa-5 提交 2007-10-18 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 B 184–272(89 aa) 片段:UNP residues 184-272
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 6.2;291 K;0.2M NACL, 0.1M BIS TRIS, 14% PEG3350, pH6.2, VAPOR DIFFUSION, SITTING DROP, temperature 291K
分辨率 2.00 Å R-free 0.266
2RL0 Crystal structure of the fourth and fifth fibronectin F1 modules in complex with a fragment of staphylococcus aureus fnbpa-5 提交 2007-10-18 Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 D 184–272(89 aa) 片段:UNP residues 184-272
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 6.2;291 K;0.2M NACL, 0.1M BIS TRIS, 14% PEG3350, pH6.2, VAPOR DIFFUSION, SITTING DROP, temperature 291K
分辨率 2.00 Å R-free 0.266
2RL0 Crystal structure of the fourth and fifth fibronectin F1 modules in complex with a fragment of staphylococcus aureus fnbpa-5 提交 2007-10-18 Assembly 4 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 F 184–272(89 aa) 片段:UNP residues 184-272
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 6.2;291 K;0.2M NACL, 0.1M BIS TRIS, 14% PEG3350, pH6.2, VAPOR DIFFUSION, SITTING DROP, temperature 291K
分辨率 2.00 Å R-free 0.266
2RL0 Crystal structure of the fourth and fifth fibronectin F1 modules in complex with a fragment of staphylococcus aureus fnbpa-5 提交 2007-10-18 Assembly 5 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 I 184–272(89 aa) 片段:UNP residues 184-272
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 6.2;291 K;0.2M NACL, 0.1M BIS TRIS, 14% PEG3350, pH6.2, VAPOR DIFFUSION, SITTING DROP, temperature 291K
分辨率 2.00 Å R-free 0.266
2RL0 Crystal structure of the fourth and fifth fibronectin F1 modules in complex with a fragment of staphylococcus aureus fnbpa-5 提交 2007-10-18 Assembly 6 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 K 184–272(89 aa) 片段:UNP residues 184-272
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 6.2;291 K;0.2M NACL, 0.1M BIS TRIS, 14% PEG3350, pH6.2, VAPOR DIFFUSION, SITTING DROP, temperature 291K
分辨率 2.00 Å R-free 0.266
3CAL Crystal structure of the second and third fibronectin F1 modules in complex with a fragment of staphylococcus aureus fnbpa-5 提交 2008-02-20 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 93–182(90 aa) 片段:UNP residues 93-182, Second and third F1 modules
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 7;291 K;0.95M succinic acid, pH7.0, VAPOR DIFFUSION, SITTING DROP, temperature 291K
分辨率 1.70 Å R-free 0.217
3CAL Crystal structure of the second and third fibronectin F1 modules in complex with a fragment of staphylococcus aureus fnbpa-5 提交 2008-02-20 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 C 93–182(90 aa) 片段:UNP residues 93-182, Second and third F1 modules
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 7;291 K;0.95M succinic acid, pH7.0, VAPOR DIFFUSION, SITTING DROP, temperature 291K
分辨率 1.70 Å R-free 0.217
3CH8 The crystal structure of PDZ-Fibronectin fusion protein 提交 2008-03-08 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 1538–1631(94 aa)
未记录 MG MAGNESIUM ION × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 7.5;293 K;31% isopropanol, 0.1M HEPES, 0.2M MgCl2, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
分辨率 1.90 Å R-free 0.260
3EJH Crystal Structure of the Fibronectin 8-9FnI Domain Pair in Complex with a Type-I Collagen Peptide 提交 2008-09-18 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 516–608(93 aa) 片段:8-9FnI
突变:N528Q, R534K NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;2.5 M NaCl, 0.1 M BisTris pH 6.5 , VAPOR DIFFUSION, SITTING DROP, temperature 293K
分辨率 2.10 Å R-free 0.242
3EJH Crystal Structure of the Fibronectin 8-9FnI Domain Pair in Complex with a Type-I Collagen Peptide 提交 2008-09-18 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 B 516–608(93 aa) 片段:8-9FnI
突变:N528Q, R534K NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 GOL GLYCEROL × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 6.5;293 K;2.5 M NaCl, 0.1 M BisTris pH 6.5 , VAPOR DIFFUSION, SITTING DROP, temperature 293K
分辨率 2.10 Å R-free 0.242
3GXE Complex of a Low Affinity Collagen Site with the Fibronectin 8-9FnI Domain Pair 提交 2009-04-02 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 B 516–608(93 aa) 片段:8-9FnI, UNP residues 516-608
突变:N528Q, R534K NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 7.5;293.1 K;0.1M HEPES pH 7.5, 4.3M NaCl, VAPOR DIFFUSION, SITTING DROP, temperature 293.1K
分辨率 2.60 Å R-free 0.271
3GXE Complex of a Low Affinity Collagen Site with the Fibronectin 8-9FnI Domain Pair 提交 2009-04-02 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 516–608(93 aa) 片段:8-9FnI, UNP residues 516-608
突变:N528Q, R534K NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 GOL GLYCEROL × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 7.5;293.1 K;0.1M HEPES pH 7.5, 4.3M NaCl, VAPOR DIFFUSION, SITTING DROP, temperature 293.1K
分辨率 2.60 Å R-free 0.271
3R8Q Structure of Fibronectin domain 12-14 提交 2011-03-24 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 1722–1992(271 aa) 片段:unp residues 1722-1992
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 7.5;291 K;0.1 M Na HEPES, 0.8 M sodium dihydrogen phosphate, 0.8 M potassium dihydrogen phosphate, supplemented with 35% glycerol for cryo-protection, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 291K
分辨率 2.40 Å R-free 0.236
3ZRZ Crystal structure of the second and third fibronectin F1 modules in complex with a fragment of Streptococcus pyogenes SfbI-5 提交 2011-06-21 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 93–182(90 aa) 片段:SECOND AND THIRD F1 MODULES, RESIDUES 93-182
未记录 SO4 SULFATE ION × 1 GOL GLYCEROL × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 7;291 K;CRYSTALS OF THE PROTEIN/PEPTIDE COMPLEX (0.3 MM/3.5 MM, PH 7.7) WERE GROWN USING SITTING DROP VAPOUR DIFFUSION FROM A 1:1 DILUTION WITH WELL SOLUTION (0.1 M TRIS PH 7.0, 1.5 M (NH4)2SO4 AT 18 DEGREES CENTIGRADE
分辨率 1.70 Å R-free 0.222
3ZRZ Crystal structure of the second and third fibronectin F1 modules in complex with a fragment of Streptococcus pyogenes SfbI-5 提交 2011-06-21 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 B 93–182(90 aa) 片段:SECOND AND THIRD F1 MODULES, RESIDUES 93-182
未记录 GOL GLYCEROL × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 7;291 K;CRYSTALS OF THE PROTEIN/PEPTIDE COMPLEX (0.3 MM/3.5 MM, PH 7.7) WERE GROWN USING SITTING DROP VAPOUR DIFFUSION FROM A 1:1 DILUTION WITH WELL SOLUTION (0.1 M TRIS PH 7.0, 1.5 M (NH4)2SO4 AT 18 DEGREES CENTIGRADE
分辨率 1.70 Å R-free 0.222
4GH7 Crystal structure of Anticalin N7A in complex with oncofetal fibronectin fragment Fn7B8 提交 2012-08-07 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 B 1173–1448(276 aa) 片段:Fn7B8, UNP residues 1173-1448
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;277 K;17-19%(w/v) PEG3350, 0.1M Na-citrate, pH 5.5-6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 2.60 Å R-free 0.259
4GH7 Crystal structure of Anticalin N7A in complex with oncofetal fibronectin fragment Fn7B8 提交 2012-08-07 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 D 1173–1448(276 aa) 片段:Fn7B8, UNP residues 1173-1448
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;277 K;17-19%(w/v) PEG3350, 0.1M Na-citrate, pH 5.5-6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K
分辨率 2.60 Å R-free 0.259
4LXO Crystal structure of 9,10Fn3-elegantin chimera 提交 2013-07-30 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 1357–1540(184 aa)
突变:L1408P, V1490C, T1491R, G1492A, S1496N, A1498D, S1499C CA CALCIUM ION × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 7.6;293 K;0.2M calcium acetate, 7%(w/v) PEG10000, pH 7.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K
分辨率 1.42 Å R-free 0.193
4LXO Crystal structure of 9,10Fn3-elegantin chimera 提交 2013-07-30 Assembly 2 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 B 1357–1540(184 aa)
突变:L1408P, V1490C, T1491R, G1492A, S1496N, A1498D, S1499C CA CALCIUM ION × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 7.6;293 K;0.2M calcium acetate, 7%(w/v) PEG10000, pH 7.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K
分辨率 1.42 Å R-free 0.193
4MMX Integrin AlphaVBeta3 ectodomain bound to the tenth domain of Fibronectin 提交 2013-09-09 Assembly 1 其他组合 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 C 1539–1631(93 aa) 片段:Fibronectin type-III domain 10 (UNP residues 1448-1540)
未记录 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 5 MN MANGANESE (II) ION × 8 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 4.5;277.15 K;12% PEG3350, 0.8 M sodium chloride, 0.1 M sodium acetate, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 277.15K
分辨率 3.32 Å R-free 0.269
4MMY Integrin AlphaVBeta3 ectodomain bound to the tenth domain of Fibronectin with the IAKGDWND motif 提交 2013-09-09 Assembly 1 其他组合 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 C 1448–1540(93 aa) 片段:Fibronectin type-III domain 10 (UNP residues 1448-1540)
突变:TGRGDSPASS to IARGDWNDG NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 5 MN MANGANESE (II) ION × 8 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 4.5;277.15 K;12% PEG3350, 0.8 M sodium chloride, 0.1 M sodium acetate, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 277.15K
分辨率 3.18 Å R-free 0.252
4MMZ Integrin AlphaVBeta3 ectodomain bound to an antagonistic tenth domain of Fibronectin 提交 2013-09-09 Assembly 1 其他组合 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 C 1539–1631(93 aa) 片段:Fibronectin type-III domain 10 (UNP residues 1448-1540)
突变:GRGDSPAS to PRGDWNEG NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 8 MN MANGANESE (II) ION × 8 NA SODIUM ION × 1 GOL GLYCEROL × 2 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 4.5;277.15 K;12% PEG3350, 0.8 M sodium chloride, 0.1 M sodium acetate, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 277.15K
分辨率 3.10 Å R-free 0.255
4PZ5 Crystal structure of the second and third fibronectin F1 modules in complex with a fragment of BBK32 from Borrelia burgdorferi 提交 2014-03-28 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 93–182(90 aa) 片段:2FN1-3FN1, UNP RESIDUES 93-182
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 6.9;291 K;1.4 M Na/K phosphate, pH 6.9, VAPOR DIFFUSION, SITTING DROP, temperature 291K
分辨率 1.96 Å R-free 0.199
5DFT Structure of the Eleventh Type III Domain from Human Fibronectin 提交 2015-08-27 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 1539–1635(97 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;293 K;1.1M sodium citrate, 0.1M citric acid and 0.1M sodium iodine
分辨率 2.50 Å R-free 0.248
5DFT Structure of the Eleventh Type III Domain from Human Fibronectin 提交 2015-08-27 Assembly 10 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 J 1539–1635(97 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;293 K;1.1M sodium citrate, 0.1M citric acid and 0.1M sodium iodine
分辨率 2.50 Å R-free 0.248
5DFT Structure of the Eleventh Type III Domain from Human Fibronectin 提交 2015-08-27 Assembly 2 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 B 1539–1635(97 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;293 K;1.1M sodium citrate, 0.1M citric acid and 0.1M sodium iodine
分辨率 2.50 Å R-free 0.248
5DFT Structure of the Eleventh Type III Domain from Human Fibronectin 提交 2015-08-27 Assembly 3 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 C 1539–1635(97 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;293 K;1.1M sodium citrate, 0.1M citric acid and 0.1M sodium iodine
分辨率 2.50 Å R-free 0.248
5DFT Structure of the Eleventh Type III Domain from Human Fibronectin 提交 2015-08-27 Assembly 4 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 D 1539–1635(97 aa)
未记录 CIT CITRIC ACID × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;293 K;1.1M sodium citrate, 0.1M citric acid and 0.1M sodium iodine
分辨率 2.50 Å R-free 0.248
5DFT Structure of the Eleventh Type III Domain from Human Fibronectin 提交 2015-08-27 Assembly 5 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 E 1539–1635(97 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;293 K;1.1M sodium citrate, 0.1M citric acid and 0.1M sodium iodine
分辨率 2.50 Å R-free 0.248
5DFT Structure of the Eleventh Type III Domain from Human Fibronectin 提交 2015-08-27 Assembly 6 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 F 1539–1635(97 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;293 K;1.1M sodium citrate, 0.1M citric acid and 0.1M sodium iodine
分辨率 2.50 Å R-free 0.248
5DFT Structure of the Eleventh Type III Domain from Human Fibronectin 提交 2015-08-27 Assembly 7 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 G 1539–1635(97 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;293 K;1.1M sodium citrate, 0.1M citric acid and 0.1M sodium iodine
分辨率 2.50 Å R-free 0.248
5DFT Structure of the Eleventh Type III Domain from Human Fibronectin 提交 2015-08-27 Assembly 8 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 H 1539–1635(97 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;293 K;1.1M sodium citrate, 0.1M citric acid and 0.1M sodium iodine
分辨率 2.50 Å R-free 0.248
5DFT Structure of the Eleventh Type III Domain from Human Fibronectin 提交 2015-08-27 Assembly 9 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 I 1539–1635(97 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;293 K;1.1M sodium citrate, 0.1M citric acid and 0.1M sodium iodine
分辨率 2.50 Å R-free 0.248
5J6Z Structure of anastellin bound to beta-strands A and B from the third type III domain of fibronectin 提交 2016-04-05 Assembly 1 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 806–834(29 aa) 片段:residues 806-834
链 B 631–705(75 aa)
未记录 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 7.5;298 K;离子强度(mmCIF原始值)166;压力 100000
NMR样品组成 0.6 mM [U-99% 13C; U-99% 15N] AB, 0.6 mM anastellin, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 140 mM sodium chloride, 2.7 mM potassium chloride, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR样品组成 0.6 mM AB, 0.6 mM [U-99% 13C; U-99% 15N] anastellin, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 140 mM sodium chloride, 2.7 mM potassium chloride, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR样品组成 0.6 mM [U-99% 15N] AB, 0.6 mM anastellin, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 140 mM sodium chloride, 2.7 mM potassium chloride, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR样品组成 0.6 mM AB, 0.6 mM [U-99% 15N] anastellin, 10 mM sodium phosphate, 1.8 mM potassium phosphate, 140 mM sodium chloride, 2.7 mM potassium chloride, 90% H2O/10% D2O | 90% H2O/10% D2O
分辨率未提供
5M0A Solution structure of isolated 15th Fibronectin III domain from human fibronectin 提交 2016-10-04 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 2108–2193(86 aa) 片段:15th Fibronectin III domain, UNP residues 2108-2193
未记录 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 6.5;298 K;离子强度(mmCIF原始值)161;压力 1
NMR测量条件 pH 6.5;298 K;离子强度(mmCIF原始值)161;压力 1
NMR样品组成 10 mM TRIS, 150 mM sodium chloride, 0.02 ug/mL TSP, 1 mM sodium azide, 0.35 mM [U-13C; U-15N] 15th Fibronectin III domain from human fibronectin, 0.5 mM EDTA, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR样品组成 10 mM [U-2H] TRIS, 0.35 mM [U-13C; U-15N] 15th Fibronectin III domain from human fibronectin, 150 mM sodium chloride, 1 mM sodium azide, 0.02 ug/mL TSP, 0.5 mM EDTA, 100% D2O | 100% D2O
分辨率未提供
5N47 Structure of Anticalin N7E in complex with the three-domain fragment Fn7B8 of human oncofetal fibronectin 提交 2017-02-10 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 B 1173–1448(276 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 5.5;298 K;17 % (w/v) PEG3350, 0.2 M NaCl, 0.1 M Na-malonate
分辨率 3.00 Å R-free 0.241
5N47 Structure of Anticalin N7E in complex with the three-domain fragment Fn7B8 of human oncofetal fibronectin 提交 2017-02-10 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 D 1173–1448(276 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 5.5;298 K;17 % (w/v) PEG3350, 0.2 M NaCl, 0.1 M Na-malonate
分辨率 3.00 Å R-free 0.241
5N47 Structure of Anticalin N7E in complex with the three-domain fragment Fn7B8 of human oncofetal fibronectin 提交 2017-02-10 Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 F 1173–1448(276 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 5.5;298 K;17 % (w/v) PEG3350, 0.2 M NaCl, 0.1 M Na-malonate
分辨率 3.00 Å R-free 0.241
5N48 Structure of Anticalin N9B in complex with extra-domain B of human oncofetal fibronectin 提交 2017-02-10 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 B 1266–1357(92 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;29 % (w/v) PEG4000, 0.1 M Na-malonate
分辨率 1.60 Å R-free 0.208
5N48 Structure of Anticalin N9B in complex with extra-domain B of human oncofetal fibronectin 提交 2017-02-10 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 D 1266–1357(92 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6.5;298 K;29 % (w/v) PEG4000, 0.1 M Na-malonate
分辨率 1.60 Å R-free 0.208
6HNF Structure in solution of human fibronectin type III-domain 14 提交 2018-09-14 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 1904–1991(88 aa)
未记录 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 7.4;298 K;离子强度(mmCIF原始值)162.7;压力 1030
NMR样品组成 1.0 mM [U-13C; U-15N] FNIII14, 90% H2O/10% D2O | 90% H2O/10% D2O
分辨率未提供
6MFA Fragment of human fibronectin containing the 4th-7th type III domains 提交 2018-09-10 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 903–1268(366 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 5.5;293 K;0.1 M MES pH 5.5, 7% PEG 6000
分辨率 1.75 Å R-free 0.238
6MSV Structure of the 6th type III domain from human fibronectin 提交 2018-10-18 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 1085–1173(89 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;293 K;2.0 M Ammonium Sulfate
分辨率 2.40 Å R-free 0.295
6MSV Structure of the 6th type III domain from human fibronectin 提交 2018-10-18 Assembly 10 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 J 1085–1173(89 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;293 K;2.0 M Ammonium Sulfate
分辨率 2.40 Å R-free 0.295
6MSV Structure of the 6th type III domain from human fibronectin 提交 2018-10-18 Assembly 11 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 K 1085–1173(89 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;293 K;2.0 M Ammonium Sulfate
分辨率 2.40 Å R-free 0.295
6MSV Structure of the 6th type III domain from human fibronectin 提交 2018-10-18 Assembly 12 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 L 1085–1173(89 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;293 K;2.0 M Ammonium Sulfate
分辨率 2.40 Å R-free 0.295
6MSV Structure of the 6th type III domain from human fibronectin 提交 2018-10-18 Assembly 13 蛋白同源多聚体 同源多聚体;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 A 1085–1173(89 aa)
链 G 1085–1173(89 aa)
链 H 1085–1173(89 aa)
链 J 1085–1173(89 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;293 K;2.0 M Ammonium Sulfate
分辨率 2.40 Å R-free 0.295
6MSV Structure of the 6th type III domain from human fibronectin 提交 2018-10-18 Assembly 14 蛋白同源多聚体 同源多聚体;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 B 1085–1173(89 aa)
链 D 1085–1173(89 aa)
链 F 1085–1173(89 aa)
链 L 1085–1173(89 aa)
未记录 GOL GLYCEROL × 2 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;293 K;2.0 M Ammonium Sulfate
分辨率 2.40 Å R-free 0.295
6MSV Structure of the 6th type III domain from human fibronectin 提交 2018-10-18 Assembly 15 蛋白同源多聚体 同源多聚体;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 C 1085–1173(89 aa)
链 E 1085–1173(89 aa)
链 I 1085–1173(89 aa)
链 K 1085–1173(89 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;293 K;2.0 M Ammonium Sulfate
分辨率 2.40 Å R-free 0.295
6MSV Structure of the 6th type III domain from human fibronectin 提交 2018-10-18 Assembly 2 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 B 1085–1173(89 aa)
未记录 GOL GLYCEROL × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;293 K;2.0 M Ammonium Sulfate
分辨率 2.40 Å R-free 0.295
6MSV Structure of the 6th type III domain from human fibronectin 提交 2018-10-18 Assembly 3 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 C 1085–1173(89 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;293 K;2.0 M Ammonium Sulfate
分辨率 2.40 Å R-free 0.295
6MSV Structure of the 6th type III domain from human fibronectin 提交 2018-10-18 Assembly 4 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 D 1085–1173(89 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;293 K;2.0 M Ammonium Sulfate
分辨率 2.40 Å R-free 0.295
6MSV Structure of the 6th type III domain from human fibronectin 提交 2018-10-18 Assembly 5 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 E 1085–1173(89 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;293 K;2.0 M Ammonium Sulfate
分辨率 2.40 Å R-free 0.295
6MSV Structure of the 6th type III domain from human fibronectin 提交 2018-10-18 Assembly 6 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 F 1085–1173(89 aa)
未记录 GOL GLYCEROL × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;293 K;2.0 M Ammonium Sulfate
分辨率 2.40 Å R-free 0.295
6MSV Structure of the 6th type III domain from human fibronectin 提交 2018-10-18 Assembly 7 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 G 1085–1173(89 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;293 K;2.0 M Ammonium Sulfate
分辨率 2.40 Å R-free 0.295
6MSV Structure of the 6th type III domain from human fibronectin 提交 2018-10-18 Assembly 8 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 H 1085–1173(89 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;293 K;2.0 M Ammonium Sulfate
分辨率 2.40 Å R-free 0.295
6MSV Structure of the 6th type III domain from human fibronectin 提交 2018-10-18 Assembly 9 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 I 1085–1173(89 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;293 K;2.0 M Ammonium Sulfate
分辨率 2.40 Å R-free 0.295
6NAJ Integrin AlphaVBeta3 ectodomain bound to Hr10 variant of the 10th domain of Fibronectin. 提交 2018-12-05 Assembly 1 其他组合 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 C 1539–1629(91 aa)
非标准单体:是(mmCIF未提供具体位点) NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 7 MN MANGANESE (II) ION × 8 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 4.5;277 K;100 M Sodium Acetate, PEG4000, 800 mM Sodium Chloride.
分辨率 3.10 Å R-free 0.268
6XAX Structure of a fragment of human fibronectin containing the 11th type III domain, extra domain A, and the 12th type III domain 提交 2020-06-04 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 B 1630–1903(274 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;277 K;0.2M Ca(CH3COO)2, 0.1M imidazole pH 8.0, 10%(w/v) PEG 8000
分辨率 2.40 Å R-free 0.312
6XAX Structure of a fragment of human fibronectin containing the 11th type III domain, extra domain A, and the 12th type III domain 提交 2020-06-04 Assembly 2 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 1630–1903(274 aa)
未记录 GOL GLYCEROL × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;277 K;0.2M Ca(CH3COO)2, 0.1M imidazole pH 8.0, 10%(w/v) PEG 8000
分辨率 2.40 Å R-free 0.312
6XAY Structure of a fragment of human fibronectin containing the 10th, 11th and 12th type III domains 提交 2020-06-05 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 1447–1722(276 aa)
突变:V1643G GOL GLYCEROL × 2 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;277 K;0.5M (NH4)2SO4, 0.1M Citric acid pH 4.0, 30%(v/v)PEG 600, 10%(v/v) glycerol
分辨率 2.48 Å R-free 0.296
6XAY Structure of a fragment of human fibronectin containing the 10th, 11th and 12th type III domains 提交 2020-06-05 Assembly 2 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 B 1447–1722(276 aa)
突变:V1643G GOL GLYCEROL × 3 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;277 K;0.5M (NH4)2SO4, 0.1M Citric acid pH 4.0, 30%(v/v)PEG 600, 10%(v/v) glycerol
分辨率 2.48 Å R-free 0.296
6XAY Structure of a fragment of human fibronectin containing the 10th, 11th and 12th type III domains 提交 2020-06-05 Assembly 3 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 C 1447–1722(276 aa)
突变:V1643G 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;277 K;0.5M (NH4)2SO4, 0.1M Citric acid pH 4.0, 30%(v/v)PEG 600, 10%(v/v) glycerol
分辨率 2.48 Å R-free 0.296
6XAY Structure of a fragment of human fibronectin containing the 10th, 11th and 12th type III domains 提交 2020-06-05 Assembly 4 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 D 1447–1722(276 aa)
突变:V1643G GOL GLYCEROL × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;277 K;0.5M (NH4)2SO4, 0.1M Citric acid pH 4.0, 30%(v/v)PEG 600, 10%(v/v) glycerol
分辨率 2.48 Å R-free 0.296
7NWL Cryo-EM structure of human integrin alpha5beta1 (open form) in complex with fibronectin and TS2/16 Fv-clasp 提交 2021-03-17 Assembly 1 其他组合 异源复合物;蛋白 × 5 PDB 声明:pentameric(5) 与蛋白数一致
链 C 1173–1540(368 aa)
未记录 MN MANGANESE (II) ION × 7 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.5
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 3.10 Å
8PEQ Complex of diubiquitin-derived artificial binding protein (Affilin) variant Af2 with its target oncofetal fibronectin (fragment 7B8) 提交 2023-06-14 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 1174–1447(274 aa)
未记录 SO4 SULFATE ION × 2 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION;pH 7.3;298 K;500 mM lithium sulfate, 15% PEG 8000 (w/v)
分辨率 2.32 Å R-free 0.251
8PEQ Complex of diubiquitin-derived artificial binding protein (Affilin) variant Af2 with its target oncofetal fibronectin (fragment 7B8) 提交 2023-06-14 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 B 1174–1447(274 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION;pH 7.3;298 K;500 mM lithium sulfate, 15% PEG 8000 (w/v)
分辨率 2.32 Å R-free 0.251
8PEQ Complex of diubiquitin-derived artificial binding protein (Affilin) variant Af2 with its target oncofetal fibronectin (fragment 7B8) 提交 2023-06-14 Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 C 1174–1447(274 aa)
未记录 未记录非水小分子 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION;pH 7.3;298 K;500 mM lithium sulfate, 15% PEG 8000 (w/v)
分辨率 2.32 Å R-free 0.251
9P6S Cryo-EM structure of human integrin alpha5beta1 in complex with fibronectin (FN 7-10) 提交 2025-06-19 Assembly 1 其他组合 异源复合物;蛋白 × 3 PDB 声明:trimeric(3) 与蛋白数一致
链 C 1449–1631(183 aa)
未记录 MN MANGANESE (II) ION × 7 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 4 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.5
cryo-EM玻璃化条件 冷冻剂 ETHANE-PROPANE
分辨率 2.61 Å