Current Protein Identity:P13671
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Difference tags compare only the current result set; every original PDB and assembly record remains separate.
Related-Structure Differences
Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.
| PDB Entry | Assembly / Oligomeric State | Construct | Mutations and Modifications | Ligands, Ions and Non-polymers | Experimental Method | Experimental Conditions | Structure Quality |
|---|---|---|---|---|---|---|---|
| 3T5O Crystal Structure of human Complement Component C6 Deposited 2011-07-27 | Assembly 1 Other combination Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count |
Chain A
22–934(913 aa)
|
Not recorded | CD CADMIUM ION × 1 FUL beta-L-fucopyranose × 1 MAN alpha-D-mannopyranose × 4 | X-RAY DIFFRACTION |
X-ray crystallization conditions
pH 5.8;284 K;5 mM MES, 89 mM Sodium Chloride, 0.01 mM Cadmium Chloride, pH 5.8, EVAPORATION, temperature 284K
|
Resolution 2.87 Å R-free 0.276 |
| 4A5W Crystal structure of C5b6 Deposited 2011-10-28 | Assembly 1 Protein heterocomplex Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count |
Chain B
22–934(913 aa)
|
Not recorded | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 4 CA CALCIUM ION × 1 FUC alpha-L-fucopyranose × 1 MAN alpha-D-mannopyranose × 3 | X-RAY DIFFRACTION |
X-ray crystallization conditions
pH 7.8;167 MM HEPES-NAOH PH7.8
|
Resolution 3.50 Å R-free 0.270 |
| 4E0S Crystal Structure of C5b-6 Deposited 2012-03-05 | Assembly 1 Other combination Heteromer;Protein × 2 PDB declaration: dimeric(2) Consistent with protein count |
Chain B
22–934(913 aa)
|
Not recorded | NA SODIUM ION × 1 CA CALCIUM ION × 1 MAN alpha-D-mannopyranose × 4 | X-RAY DIFFRACTION |
X-ray crystallization conditions
pH 7.6;298 K;0.08M lithium chloride, 0.01M imidazole-HCl, pH 7.6, SMALL TUBES, temperature 298K
|
Resolution 4.21 Å R-free 0.278 |
| 6H03 OPEN CONFORMATION OF THE MEMBRANE ATTACK COMPLEX Deposited 2018-07-06 | Assembly 1 Other combination Heteromer;Protein × 24 PDB declaration: 24-meric(24) Consistent with protein count |
Chain B
22–934(913 aa)
|
Not recorded | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 37 | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 5.60 Å |
| 6H04 Closed conformation of the Membrane Attack Complex Deposited 2018-07-06 | Assembly 1 Other combination Heteromer;Protein × 24 PDB declaration: 24-meric(24) Consistent with protein count |
Chain B
22–934(913 aa)
|
Not recorded | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 38 | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 5.60 Å |
| 7NYC cryoEM structure of 3C9-sMAC Deposited 2021-03-22 | Assembly 1 Other combination Heteromer;Protein × 9 PDB declaration: nonameric(9) Consistent with protein count |
Chain B
22–934(913 aa)
|
Not recorded | MAN alpha-D-mannopyranose × 7 CA CALCIUM ION × 3 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 4 FUC alpha-L-fucopyranose × 1 | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.54 Å |
| 7NYD cryoEM structure of 2C9-sMAC Deposited 2021-03-22 | Assembly 1 Other combination Heteromer;Protein × 8 PDB declaration: octameric(8) Consistent with protein count |
Chain B
22–934(913 aa)
|
Not recorded | MAN alpha-D-mannopyranose × 6 CA CALCIUM ION × 4 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 3 FUC alpha-L-fucopyranose × 1 | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.27 Å |
| 7Q6C complement C6 FIM1-2 bound to CP010 antibody Deposited 2021-11-06 | Assembly 1 Protein heterocomplex Heteromer;Protein × 4 PDB declaration: tetrameric(4) Consistent with protein count |
Chain A
769–934(166 aa)
|
Not recorded | ACT ACETATE ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION;pH 6.4;291 K;112 mM calcium acetate, 56 mM sodium cacodylate pH 6.4, 8.5% PEG8000 and 16% glycerol
|
Resolution 2.29 Å R-free 0.233 |
| 8B0F CryoEM structure of C5b8-CD59 Deposited 2022-09-07 | Assembly 1 Other combination Heteromer;Protein × 7 PDB declaration: heptameric(7) Consistent with protein count |
Chain B
1–934(934 aa)
|
Not recorded | CA CALCIUM ION × 2 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.00 Å |
| 8B0G 2C9, C5b9-CD59 structure Deposited 2022-09-07 | Assembly 1 Other combination Heteromer;Protein × 10 PDB declaration: decameric(10) Consistent with protein count |
Chain B
1–934(934 aa)
|
Not recorded | No recorded non-water small molecule | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7.4;20 mM HEPES pH 7.4, 120 mM NaCl
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.30 Å |
| 8B0H 2C9, C5b9-CD59 cryoEM structure Deposited 2022-09-07 | Assembly 1 Protein heterocomplex Heteromer;Protein × 9 PDB declaration: nonameric(9) Consistent with protein count |
Chain B
1–934(934 aa)
|
Not recorded | No recorded non-water small molecule | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7.4;20 mM HEPES pH 7.4, 120 mM NaCl
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.30 Å |