当前蛋白身份:P15151
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差异标签只比较当前检索结果;所有PDB和assembly原始记录仍分别保留。
相关结构差异明细
一行代表一个 PDB 条目中的一个 biological assembly;同一蛋白的多个单体会分别列出。
| PDB 条目 | Assembly / 聚集状态 | 构建体 | 突变与修饰 | 配体、离子与非聚合物 | 实验方法 | 实验环境 | 结构质量 |
|---|---|---|---|---|---|---|---|
| 1DGI Cryo-EM structure of human poliovirus(serotype 1)complexed with three domain CD155 提交 1999-11-24 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 300 PDB 声明:300-MERIC(300) 与蛋白数一致 |
链 R
28–329(302 aa)
片段:THREE EXTRACELLULAR DOMAINS OF CD155
|
未记录 | 未记录非水小分子 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5
cryo-EM玻璃化条件
POLIOVIRUS WAS INCUBATED WITH CD155-AP FOR 1 HOURS AT 4
DEGREES CELSIUS (277 KELVIN) USING A EIGHT-FOLD EXCESS
OF CD155-AP FOR EACH OF THE SIXTY POSSIBLE BINDING
SITES PER VIRION. AFTER INCUBATION, SAMPLES WERE PREPARED
AS THIN LAYERS OF VITREOUS ICE AND MAINTAINED AT NEAR
LIQUID NITROGEN TEMPERATURE IN THE ELECTRON MICROSCOPE
WITH A GATAN 626 CRYOTRANSFER HOLDER.
X-ray结晶条件
ELECTRON MICROSCOPY RECONSTRUCTION;pH 7.5;WARNING: THIS IS AN ELECTRON MICROSCOPY MODEL DEPOSITION. CRYO-EM INFORMATION HAS BEEN INCLUDED IN THE FORM OF REMARK 250 RECORDS AT THE TOP OF THE PDB COORDINATE FILE., pH 7.5, ELECTRON MICROSCOPY RECONSTRUCTION
|
分辨率 22.00 Å |
| 1DGI Cryo-EM structure of human poliovirus(serotype 1)complexed with three domain CD155 提交 1999-11-24 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 5 PDB 声明:pentameric(5) 与蛋白数一致 |
链 R
28–329(302 aa)
片段:THREE EXTRACELLULAR DOMAINS OF CD155
|
未记录 | 未记录非水小分子 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5
cryo-EM玻璃化条件
POLIOVIRUS WAS INCUBATED WITH CD155-AP FOR 1 HOURS AT 4
DEGREES CELSIUS (277 KELVIN) USING A EIGHT-FOLD EXCESS
OF CD155-AP FOR EACH OF THE SIXTY POSSIBLE BINDING
SITES PER VIRION. AFTER INCUBATION, SAMPLES WERE PREPARED
AS THIN LAYERS OF VITREOUS ICE AND MAINTAINED AT NEAR
LIQUID NITROGEN TEMPERATURE IN THE ELECTRON MICROSCOPE
WITH A GATAN 626 CRYOTRANSFER HOLDER.
X-ray结晶条件
ELECTRON MICROSCOPY RECONSTRUCTION;pH 7.5;WARNING: THIS IS AN ELECTRON MICROSCOPY MODEL DEPOSITION. CRYO-EM INFORMATION HAS BEEN INCLUDED IN THE FORM OF REMARK 250 RECORDS AT THE TOP OF THE PDB COORDINATE FILE., pH 7.5, ELECTRON MICROSCOPY RECONSTRUCTION
|
分辨率 22.00 Å |
| 1DGI Cryo-EM structure of human poliovirus(serotype 1)complexed with three domain CD155 提交 1999-11-24 | Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 25 PDB 声明:25-meric(25) 与蛋白数一致 |
链 R
28–329(302 aa)
片段:THREE EXTRACELLULAR DOMAINS OF CD155
|
未记录 | 未记录非水小分子 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5
cryo-EM玻璃化条件
POLIOVIRUS WAS INCUBATED WITH CD155-AP FOR 1 HOURS AT 4
DEGREES CELSIUS (277 KELVIN) USING A EIGHT-FOLD EXCESS
OF CD155-AP FOR EACH OF THE SIXTY POSSIBLE BINDING
SITES PER VIRION. AFTER INCUBATION, SAMPLES WERE PREPARED
AS THIN LAYERS OF VITREOUS ICE AND MAINTAINED AT NEAR
LIQUID NITROGEN TEMPERATURE IN THE ELECTRON MICROSCOPE
WITH A GATAN 626 CRYOTRANSFER HOLDER.
X-ray结晶条件
ELECTRON MICROSCOPY RECONSTRUCTION;pH 7.5;WARNING: THIS IS AN ELECTRON MICROSCOPY MODEL DEPOSITION. CRYO-EM INFORMATION HAS BEEN INCLUDED IN THE FORM OF REMARK 250 RECORDS AT THE TOP OF THE PDB COORDINATE FILE., pH 7.5, ELECTRON MICROSCOPY RECONSTRUCTION
|
分辨率 22.00 Å |
| 1DGI Cryo-EM structure of human poliovirus(serotype 1)complexed with three domain CD155 提交 1999-11-24 | Assembly 4 蛋白异源复合物 异源复合物;蛋白 × 30 PDB 声明:30-meric(30) 与蛋白数一致 |
链 R
28–329(302 aa)
片段:THREE EXTRACELLULAR DOMAINS OF CD155
|
未记录 | 未记录非水小分子 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5
cryo-EM玻璃化条件
POLIOVIRUS WAS INCUBATED WITH CD155-AP FOR 1 HOURS AT 4
DEGREES CELSIUS (277 KELVIN) USING A EIGHT-FOLD EXCESS
OF CD155-AP FOR EACH OF THE SIXTY POSSIBLE BINDING
SITES PER VIRION. AFTER INCUBATION, SAMPLES WERE PREPARED
AS THIN LAYERS OF VITREOUS ICE AND MAINTAINED AT NEAR
LIQUID NITROGEN TEMPERATURE IN THE ELECTRON MICROSCOPE
WITH A GATAN 626 CRYOTRANSFER HOLDER.
X-ray结晶条件
ELECTRON MICROSCOPY RECONSTRUCTION;pH 7.5;WARNING: THIS IS AN ELECTRON MICROSCOPY MODEL DEPOSITION. CRYO-EM INFORMATION HAS BEEN INCLUDED IN THE FORM OF REMARK 250 RECORDS AT THE TOP OF THE PDB COORDINATE FILE., pH 7.5, ELECTRON MICROSCOPY RECONSTRUCTION
|
分辨率 22.00 Å |
| 1DGI Cryo-EM structure of human poliovirus(serotype 1)complexed with three domain CD155 提交 1999-11-24 | Assembly 5 蛋白异源复合物 异源复合物;蛋白 × 5 PDB 声明:pentameric(5) 与蛋白数一致 |
链 R
28–329(302 aa)
片段:THREE EXTRACELLULAR DOMAINS OF CD155
|
未记录 | 未记录非水小分子 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5
cryo-EM玻璃化条件
POLIOVIRUS WAS INCUBATED WITH CD155-AP FOR 1 HOURS AT 4
DEGREES CELSIUS (277 KELVIN) USING A EIGHT-FOLD EXCESS
OF CD155-AP FOR EACH OF THE SIXTY POSSIBLE BINDING
SITES PER VIRION. AFTER INCUBATION, SAMPLES WERE PREPARED
AS THIN LAYERS OF VITREOUS ICE AND MAINTAINED AT NEAR
LIQUID NITROGEN TEMPERATURE IN THE ELECTRON MICROSCOPE
WITH A GATAN 626 CRYOTRANSFER HOLDER.
X-ray结晶条件
ELECTRON MICROSCOPY RECONSTRUCTION;pH 7.5;WARNING: THIS IS AN ELECTRON MICROSCOPY MODEL DEPOSITION. CRYO-EM INFORMATION HAS BEEN INCLUDED IN THE FORM OF REMARK 250 RECORDS AT THE TOP OF THE PDB COORDINATE FILE., pH 7.5, ELECTRON MICROSCOPY RECONSTRUCTION
|
分辨率 22.00 Å |
| 1NN8 CryoEM structure of poliovirus receptor bound to poliovirus 提交 2003-01-13 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 420 PDB 声明:420-MERIC(420) 与蛋白数一致 |
链 R
28–329(302 aa)
链 S
28–329(302 aa)
链 T
28–329(302 aa)
|
未记录 | MYR MYRISTIC ACID × 60 | ELECTRON MICROSCOPY | mmCIF 未提供已读取条件 | 分辨率 15.00 Å |
| 1NN8 CryoEM structure of poliovirus receptor bound to poliovirus 提交 2003-01-13 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 7 PDB 声明:heptameric(7) 与蛋白数一致 |
链 R
28–329(302 aa)
链 S
28–329(302 aa)
链 T
28–329(302 aa)
|
未记录 | MYR MYRISTIC ACID × 1 | ELECTRON MICROSCOPY | mmCIF 未提供已读取条件 | 分辨率 15.00 Å |
| 1NN8 CryoEM structure of poliovirus receptor bound to poliovirus 提交 2003-01-13 | Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 35 PDB 声明:35-meric(35) 与蛋白数一致 |
链 R
28–329(302 aa)
链 S
28–329(302 aa)
链 T
28–329(302 aa)
|
未记录 | MYR MYRISTIC ACID × 5 | ELECTRON MICROSCOPY | mmCIF 未提供已读取条件 | 分辨率 15.00 Å |
| 1NN8 CryoEM structure of poliovirus receptor bound to poliovirus 提交 2003-01-13 | Assembly 4 蛋白异源复合物 异源复合物;蛋白 × 42 PDB 声明:42-meric(42) 与蛋白数一致 |
链 R
28–329(302 aa)
链 S
28–329(302 aa)
链 T
28–329(302 aa)
|
未记录 | MYR MYRISTIC ACID × 6 | ELECTRON MICROSCOPY | mmCIF 未提供已读取条件 | 分辨率 15.00 Å |
| 1NN8 CryoEM structure of poliovirus receptor bound to poliovirus 提交 2003-01-13 | Assembly 5 蛋白异源复合物 异源复合物;蛋白 × 7 PDB 声明:heptameric(7) 与蛋白数一致 |
链 R
28–329(302 aa)
链 S
28–329(302 aa)
链 T
28–329(302 aa)
|
未记录 | MYR MYRISTIC ACID × 1 | ELECTRON MICROSCOPY | mmCIF 未提供已读取条件 | 分辨率 15.00 Å |
| 3EPC CryoEM structure of poliovirus receptor bound to poliovirus type 1 提交 2008-09-29 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 300 PDB 声明:300-MERIC(300) 与蛋白数一致 |
链 R
30–242(213 aa)
片段:Poliovirus receptor CD155 D1D2
|
突变:N105D, N120S, N188Q, N218Q, N237S | SPH SPHINGOSINE × 60 MYR MYRISTIC ACID × 60 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5;10mM Tris-HCl, 20mM NaCl
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 8.00 Å |
| 3EPC CryoEM structure of poliovirus receptor bound to poliovirus type 1 提交 2008-09-29 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 5 PDB 声明:pentameric(5) 与蛋白数一致 |
链 R
30–242(213 aa)
片段:Poliovirus receptor CD155 D1D2
|
突变:N105D, N120S, N188Q, N218Q, N237S | SPH SPHINGOSINE × 1 MYR MYRISTIC ACID × 1 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5;10mM Tris-HCl, 20mM NaCl
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 8.00 Å |
| 3EPC CryoEM structure of poliovirus receptor bound to poliovirus type 1 提交 2008-09-29 | Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 25 PDB 声明:25-meric(25) 与蛋白数一致 |
链 R
30–242(213 aa)
片段:Poliovirus receptor CD155 D1D2
|
突变:N105D, N120S, N188Q, N218Q, N237S | SPH SPHINGOSINE × 5 MYR MYRISTIC ACID × 5 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5;10mM Tris-HCl, 20mM NaCl
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 8.00 Å |
| 3EPC CryoEM structure of poliovirus receptor bound to poliovirus type 1 提交 2008-09-29 | Assembly 4 蛋白异源复合物 异源复合物;蛋白 × 30 PDB 声明:30-meric(30) 与蛋白数一致 |
链 R
30–242(213 aa)
片段:Poliovirus receptor CD155 D1D2
|
突变:N105D, N120S, N188Q, N218Q, N237S | SPH SPHINGOSINE × 6 MYR MYRISTIC ACID × 6 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5;10mM Tris-HCl, 20mM NaCl
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 8.00 Å |
| 3EPC CryoEM structure of poliovirus receptor bound to poliovirus type 1 提交 2008-09-29 | Assembly 5 蛋白异源复合物 异源复合物;蛋白 × 5 PDB 声明:pentameric(5) 与蛋白数一致 |
链 R
30–242(213 aa)
片段:Poliovirus receptor CD155 D1D2
|
突变:N105D, N120S, N188Q, N218Q, N237S | SPH SPHINGOSINE × 1 MYR MYRISTIC ACID × 1 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5;10mM Tris-HCl, 20mM NaCl
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 8.00 Å |
| 3EPD CryoEM structure of poliovirus receptor bound to poliovirus type 3 提交 2008-09-29 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 360 PDB 声明:360-MERIC(360) 与蛋白数一致 |
链 R
30–242(213 aa)
片段:Poliovirus receptor CD155 D1D2
|
突变:N105D, N120S, N188Q, N218Q, N237S | SPH SPHINGOSINE × 60 MYR MYRISTIC ACID × 60 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5;10mM Tris-HCl, 20mM NaCl
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 9.00 Å |
| 3EPD CryoEM structure of poliovirus receptor bound to poliovirus type 3 提交 2008-09-29 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致 |
链 R
30–242(213 aa)
片段:Poliovirus receptor CD155 D1D2
|
突变:N105D, N120S, N188Q, N218Q, N237S | SPH SPHINGOSINE × 1 MYR MYRISTIC ACID × 1 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5;10mM Tris-HCl, 20mM NaCl
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 9.00 Å |
| 3EPD CryoEM structure of poliovirus receptor bound to poliovirus type 3 提交 2008-09-29 | Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 30 PDB 声明:30-meric(30) 与蛋白数一致 |
链 R
30–242(213 aa)
片段:Poliovirus receptor CD155 D1D2
|
突变:N105D, N120S, N188Q, N218Q, N237S | SPH SPHINGOSINE × 5 MYR MYRISTIC ACID × 5 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5;10mM Tris-HCl, 20mM NaCl
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 9.00 Å |
| 3EPD CryoEM structure of poliovirus receptor bound to poliovirus type 3 提交 2008-09-29 | Assembly 4 蛋白异源复合物 异源复合物;蛋白 × 36 PDB 声明:36-meric(36) 与蛋白数一致 |
链 R
30–242(213 aa)
片段:Poliovirus receptor CD155 D1D2
|
突变:N105D, N120S, N188Q, N218Q, N237S | SPH SPHINGOSINE × 6 MYR MYRISTIC ACID × 6 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5;10mM Tris-HCl, 20mM NaCl
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 9.00 Å |
| 3EPD CryoEM structure of poliovirus receptor bound to poliovirus type 3 提交 2008-09-29 | Assembly 5 蛋白异源复合物 异源复合物;蛋白 × 6 PDB 声明:hexameric(6) 与蛋白数一致 |
链 R
30–242(213 aa)
片段:Poliovirus receptor CD155 D1D2
|
突变:N105D, N120S, N188Q, N218Q, N237S | SPH SPHINGOSINE × 1 MYR MYRISTIC ACID × 1 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5;10mM Tris-HCl, 20mM NaCl
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 9.00 Å |
| 3EPF CryoEM structure of poliovirus receptor bound to poliovirus type 2 提交 2008-09-29 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 300 PDB 声明:300-MERIC(300) 与蛋白数一致 |
链 R
30–242(213 aa)
片段:Poliovirus receptor CD155 D1D2
|
突变:N105D, N120S, N188Q, N218Q, N237S | SC4 1[2-CHLORO-4-METHOXY-PHENYL-OXYMETHYL]-4-[2,6-DICHLORO-PHENYL-OXYMETHYL]-BENZENE × 60 MYR MYRISTIC ACID × 60 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5;10mM Tris-HCl, 20mM NaCl
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 9.00 Å |
| 3EPF CryoEM structure of poliovirus receptor bound to poliovirus type 2 提交 2008-09-29 | Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 5 PDB 声明:pentameric(5) 与蛋白数一致 |
链 R
30–242(213 aa)
片段:Poliovirus receptor CD155 D1D2
|
突变:N105D, N120S, N188Q, N218Q, N237S | SC4 1[2-CHLORO-4-METHOXY-PHENYL-OXYMETHYL]-4-[2,6-DICHLORO-PHENYL-OXYMETHYL]-BENZENE × 1 MYR MYRISTIC ACID × 1 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5;10mM Tris-HCl, 20mM NaCl
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 9.00 Å |
| 3EPF CryoEM structure of poliovirus receptor bound to poliovirus type 2 提交 2008-09-29 | Assembly 3 蛋白异源复合物 异源复合物;蛋白 × 25 PDB 声明:25-meric(25) 与蛋白数一致 |
链 R
30–242(213 aa)
片段:Poliovirus receptor CD155 D1D2
|
突变:N105D, N120S, N188Q, N218Q, N237S | SC4 1[2-CHLORO-4-METHOXY-PHENYL-OXYMETHYL]-4-[2,6-DICHLORO-PHENYL-OXYMETHYL]-BENZENE × 5 MYR MYRISTIC ACID × 5 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5;10mM Tris-HCl, 20mM NaCl
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 9.00 Å |
| 3EPF CryoEM structure of poliovirus receptor bound to poliovirus type 2 提交 2008-09-29 | Assembly 4 蛋白异源复合物 异源复合物;蛋白 × 30 PDB 声明:30-meric(30) 与蛋白数一致 |
链 R
30–242(213 aa)
片段:Poliovirus receptor CD155 D1D2
|
突变:N105D, N120S, N188Q, N218Q, N237S | SC4 1[2-CHLORO-4-METHOXY-PHENYL-OXYMETHYL]-4-[2,6-DICHLORO-PHENYL-OXYMETHYL]-BENZENE × 6 MYR MYRISTIC ACID × 6 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5;10mM Tris-HCl, 20mM NaCl
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 9.00 Å |
| 3EPF CryoEM structure of poliovirus receptor bound to poliovirus type 2 提交 2008-09-29 | Assembly 5 蛋白异源复合物 异源复合物;蛋白 × 5 PDB 声明:pentameric(5) 与蛋白数一致 |
链 R
30–242(213 aa)
片段:Poliovirus receptor CD155 D1D2
|
突变:N105D, N120S, N188Q, N218Q, N237S | SC4 1[2-CHLORO-4-METHOXY-PHENYL-OXYMETHYL]-4-[2,6-DICHLORO-PHENYL-OXYMETHYL]-BENZENE × 1 MYR MYRISTIC ACID × 1 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
pH 7.5;10mM Tris-HCl, 20mM NaCl
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 9.00 Å |
| 3J8F Cryo-EM reconstruction of poliovirus-receptor complex 提交 2014-10-20 | Assembly 1 其他组合 异源复合物;蛋白 × 300 PDB 声明:300-meric(300) 与蛋白数一致 |
链 7
1–417(417 aa)
|
未记录 | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 60 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
PBS;pH 7;PBS
cryo-EM玻璃化条件
Sample mixed and frozen within 2 minutes.;120 K;冷冻剂 ETHANE;Sample mixed and frozen within 2 minutes before plunging into liquid ethane.
|
分辨率 3.70 Å |
| 3J8F Cryo-EM reconstruction of poliovirus-receptor complex 提交 2014-10-20 | Assembly 2 其他组合 异源复合物;蛋白 × 5 PDB 声明:pentameric(5) 与蛋白数一致 |
链 7
1–417(417 aa)
|
未记录 | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
PBS;pH 7;PBS
cryo-EM玻璃化条件
Sample mixed and frozen within 2 minutes.;120 K;冷冻剂 ETHANE;Sample mixed and frozen within 2 minutes before plunging into liquid ethane.
|
分辨率 3.70 Å |
| 3J8F Cryo-EM reconstruction of poliovirus-receptor complex 提交 2014-10-20 | Assembly 3 其他组合 异源复合物;蛋白 × 25 PDB 声明:25-meric(25) 与蛋白数一致 |
链 7
1–417(417 aa)
|
未记录 | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 5 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
PBS;pH 7;PBS
cryo-EM玻璃化条件
Sample mixed and frozen within 2 minutes.;120 K;冷冻剂 ETHANE;Sample mixed and frozen within 2 minutes before plunging into liquid ethane.
|
分辨率 3.70 Å |
| 3J8F Cryo-EM reconstruction of poliovirus-receptor complex 提交 2014-10-20 | Assembly 4 其他组合 异源复合物;蛋白 × 30 PDB 声明:30-meric(30) 与蛋白数一致 |
链 7
1–417(417 aa)
|
未记录 | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 6 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
PBS;pH 7;PBS
cryo-EM玻璃化条件
Sample mixed and frozen within 2 minutes.;120 K;冷冻剂 ETHANE;Sample mixed and frozen within 2 minutes before plunging into liquid ethane.
|
分辨率 3.70 Å |
| 3J8F Cryo-EM reconstruction of poliovirus-receptor complex 提交 2014-10-20 | Assembly 5 其他组合 异源复合物;蛋白 × 5 PDB 声明:pentameric(5) 与蛋白数一致 |
链 7
1–417(417 aa)
|
未记录 | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 | ELECTRON MICROSCOPY |
cryo-EM缓冲液
PBS;pH 7;PBS
cryo-EM玻璃化条件
Sample mixed and frozen within 2 minutes.;120 K;冷冻剂 ETHANE;Sample mixed and frozen within 2 minutes before plunging into liquid ethane.
|
分辨率 3.70 Å |
| 3J9F Poliovirus complexed with soluble, deglycosylated poliovirus receptor (Pvr) at 4 degrees C 提交 2015-01-15 | Assembly 1 其他组合 异源复合物;蛋白 × 420 PDB 声明:420-meric(420) 与蛋白数一致 |
链 7
28–143(116 aa)
片段:SEE REMARK 999
链 8
142–243(102 aa)
片段:SEE REMARK 999
链 9
242–333(92 aa)
片段:SEE REMARK 999
|
未记录 | PLM PALMITIC ACID × 60 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 60 | ELECTRON MICROSCOPY |
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 9.00 Å |
| 3J9F Poliovirus complexed with soluble, deglycosylated poliovirus receptor (Pvr) at 4 degrees C 提交 2015-01-15 | Assembly 2 其他组合 异源复合物;蛋白 × 7 PDB 声明:heptameric(7) 与蛋白数一致 |
链 7
28–143(116 aa)
片段:SEE REMARK 999
链 8
142–243(102 aa)
片段:SEE REMARK 999
链 9
242–333(92 aa)
片段:SEE REMARK 999
|
未记录 | PLM PALMITIC ACID × 1 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 | ELECTRON MICROSCOPY |
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 9.00 Å |
| 3J9F Poliovirus complexed with soluble, deglycosylated poliovirus receptor (Pvr) at 4 degrees C 提交 2015-01-15 | Assembly 3 其他组合 异源复合物;蛋白 × 35 PDB 声明:35-meric(35) 与蛋白数一致 |
链 7
28–143(116 aa)
片段:SEE REMARK 999
链 8
142–243(102 aa)
片段:SEE REMARK 999
链 9
242–333(92 aa)
片段:SEE REMARK 999
|
未记录 | PLM PALMITIC ACID × 5 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 5 | ELECTRON MICROSCOPY |
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 9.00 Å |
| 3J9F Poliovirus complexed with soluble, deglycosylated poliovirus receptor (Pvr) at 4 degrees C 提交 2015-01-15 | Assembly 4 其他组合 异源复合物;蛋白 × 42 PDB 声明:42-meric(42) 与蛋白数一致 |
链 7
28–143(116 aa)
片段:SEE REMARK 999
链 8
142–243(102 aa)
片段:SEE REMARK 999
链 9
242–333(92 aa)
片段:SEE REMARK 999
|
未记录 | PLM PALMITIC ACID × 6 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 6 | ELECTRON MICROSCOPY |
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 9.00 Å |
| 3J9F Poliovirus complexed with soluble, deglycosylated poliovirus receptor (Pvr) at 4 degrees C 提交 2015-01-15 | Assembly 5 其他组合 异源复合物;蛋白 × 7 PDB 声明:heptameric(7) 与蛋白数一致 |
链 7
28–143(116 aa)
片段:SEE REMARK 999
链 8
142–243(102 aa)
片段:SEE REMARK 999
链 9
242–333(92 aa)
片段:SEE REMARK 999
|
未记录 | PLM PALMITIC ACID × 1 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 | ELECTRON MICROSCOPY |
cryo-EM玻璃化条件
冷冻剂 ETHANE
|
分辨率 9.00 Å |
| 3UDW Crystal structure of the immunoreceptor TIGIT in complex with Poliovirus receptor (PVR/CD155/necl-5) D1 domain 提交 2011-10-28 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 C
28–145(118 aa)
片段:PVR, UNP residues 28-145
链 D
28–145(118 aa)
片段:PVR, UNP residues 28-145
|
未记录 | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 4 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 5.5;298 K;0.1 M Ammonium acetate
0.1 M Bis-Tris pH 5.5
17% PEG 10000, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 2.90 Å R-free 0.287 |
| 3URO Poliovirus receptor CD155 D1D2 提交 2011-11-22 | Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 R
29–243(215 aa)
片段:poliovirus receptor CD155 D1D2 (UNP Residues 29-243)
|
突变:N105D, N120S, N188Q, N218Q, N237S | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;298 K;100 mM MgSO4, 6.8 M NH4NO3, 100 mM Tris buffer, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 3.50 Å R-free 0.341 |
| 3URO Poliovirus receptor CD155 D1D2 提交 2011-11-22 | Assembly 2 蛋白同源多聚体 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 R
29–243(215 aa)
片段:poliovirus receptor CD155 D1D2 (UNP Residues 29-243)
|
突变:N105D, N120S, N188Q, N218Q, N237S | 未记录非水小分子 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 8.5;298 K;100 mM MgSO4, 6.8 M NH4NO3, 100 mM Tris buffer, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
分辨率 3.50 Å R-free 0.341 |
| 4FQP Crystal structure of human Nectin-like 5 full ectodomain (D1-D3) 提交 2012-06-25 | Assembly 1 其他组合 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致 |
链 A
28–334(307 aa)
片段:ectodomain (D1-D3, UNP residues 28-334)
|
未记录 | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;pH 9;293.15 K;55% v/v tacsimate, 0.1 M Bicine, pH 9.0, with additional 10% tacsimate as cryoprotectant, VAPOR DIFFUSION, HANGING DROP, temperature 293.15K
|
分辨率 3.60 Å R-free 0.272 |
| 6ARQ Crystal structure of CD96 (D1) bound to CD155/necl-5 (D1-3) 提交 2017-08-23 | Assembly 1 其他组合 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 D
28–334(307 aa)
|
未记录 | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 3 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;32% (v/v) Jeffamine ED-2001
0.1M HEPES pH7.3
|
分辨率 2.88 Å R-free 0.252 |
| 6ISC complex structure of mCD226-ecto and hCD155-D1 提交 2018-11-16 | Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致 |
链 B
28–145(118 aa)
|
未记录 | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, SITTING DROP;291 K;0.1 M Tris (pH 8.0), 0.15 M ammonium sulfate, and 15% (w/v) PEG4000
|
分辨率 2.20 Å R-free 0.265 |
| 6O3O Structure of human DNAM-1 (CD226) bound to nectin-like protein-5 (necl-5) 提交 2019-02-27 | Assembly 1 其他组合 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致 |
链 C
28–334(307 aa)
链 D
28–334(307 aa)
|
未记录 | NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 12 SO4 SULFATE ION × 3 | X-RAY DIFFRACTION |
X-ray结晶条件
VAPOR DIFFUSION, HANGING DROP;293 K;20% PEG3350, 0.18M K2SO4, 10mM EDTA
|
分辨率 2.80 Å R-free 0.231 |