当前蛋白身份:P62694 重新检索
本组结构的主要差异维度
构建体不同 突变/修饰不同 组装状态不同 配体/离子不同 实验方法不同 实验环境不同 结构质量指标不同

差异标签只比较当前检索结果;所有PDB和assembly原始记录仍分别保留。

相关结构差异明细

一行代表一个 PDB 条目中的一个 biological assembly;同一蛋白的多个单体会分别列出。

PDB 条目 Assembly / 聚集状态 构建体 突变与修饰 配体、离子与非聚合物 实验方法 实验环境 结构质量
1AZ6 THREE-DIMENSIONAL STRUCTURES OF THREE ENGINEERED CELLULOSE-BINDING DOMAINS OF CELLOBIOHYDROLASE I FROM TRICHODERMA REESEI, NMR, 23 STRUCTURES 提交 1997-11-25 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 478–513(36 aa) 片段:CELLULOSE-BINDING DOMAIN
突变:Y5A 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 3.9;288 K
分辨率未提供
1AZH THREE-DIMENSIONAL STRUCTURES OF THREE ENGINEERED CELLULOSE-BINDING DOMAINS OF CELLOBIOHYDROLASE I FROM TRICHODERMA REESEI, NMR, 14 STRUCTURES 提交 1997-11-18 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 478–513(36 aa) 片段:CELLULOSE-BINDING DOMAIN
突变:Y5A 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 3.9;288 K
分辨率未提供
1AZJ THREE-DIMENSIONAL STRUCTURES OF THREE ENGINEERED CELLULOSE-BINDING DOMAINS OF CELLOBIOHYDROLASE I FROM TRICHODERMA REESEI, NMR, 18 STRUCTURES 提交 1997-11-18 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 478–513(36 aa) 片段:CELLULOSE-BINDING DOMAIN
突变:Y31A 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 3.9;288 K
分辨率未提供
1AZK THREE-DIMENSIONAL STRUCTURES OF THREE ENGINEERED CELLULOSE-BINDING DOMAINS OF CELLOBIOHYDROLASE I FROM TRICHODERMA REESEI, NMR, 19 STRUCTURES 提交 1997-11-18 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 478–513(36 aa) 片段:CELLULOSE-BINDING DOMAIN
突变:Y32A 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 3.9;288 K
分辨率未提供
1CBH DETERMINATION OF THE THREE-DIMENSIONAL STRUCTURE OF THE C-TERMINAL DOMAIN OF CELLOBIOHYDROLASE I FROM TRICHODERMA REESEI. A STUDY USING NUCLEAR MAGNETIC RESONANCE AND HYBRID DISTANCE GEOMETRY-DYNAMICAL SIMULATED ANNEALING 提交 1989-05-30 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 478–513(36 aa)
未记录 未记录非水小分子 SOLUTION NMR mmCIF 未提供已读取条件 分辨率未提供
1DY4 CBH1 IN COMPLEX WITH S-PROPRANOLOL 提交 2000-01-26 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 18–451(434 aa) 片段:CATALYTIC DOMAIN, RESIDUES 18-451
非标准单体:是(mmCIF未提供具体位点) NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 SNP 1-(ISOPROPYLAMINO)-3-(1-NAPHTHYLOXY)-2-PROPANOL × 1 CO COBALT (II) ION × 2 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 7;HANGING DROPS. EQUAL VOLUMES OF 9 MG/ML PROTEIN/7.5 MM S-PROPRANOLOL AND RESERVOIR SOLUTION CONTAINING 0.1 M MES (PH 7.0), 24% (W/V) MONOMETHYL ETHER PEG 5000, 15% GLYCEROL AND 10 MM COCL2.
分辨率 1.90 Å R-free 0.220
1EGN CELLOBIOHYDROLASE CEL7A (E223S, A224H, L225V, T226A, D262G) MUTANT 提交 2000-02-16 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 18–451(434 aa) 片段:CATALYTIC DOMAIN, RESIDUES 1 - 434
突变:E223S, A224H, L225V, T226A, D262G 非标准单体:是(mmCIF未提供具体位点) NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 CO COBALT (II) ION × 2 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 5;293 K;sodium acetate, PEG 5000 monomethyl-ether, glycerol, sodium morpholine-ethane-sulphonic acid, cobalt chloride , pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
分辨率 1.60 Å R-free 0.270
1Q2B CELLOBIOHYDROLASE CEL7A WITH DISULPHIDE BRIDGE ADDED ACROSS EXO-LOOP BY MUTATIONS D241C AND D249C 提交 2003-07-24 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 18–451(434 aa) 片段:CATALYTIC DOMAIN 1-434
突变:D241C, D249C 非标准单体:是(mmCIF未提供具体位点) NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 CO COBALT (II) ION × 2 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6;298 K;PEG 5000 monomethyl ether, sodium morpholine-ethane-sulphonic acid, glycerol, cobalt chloride, sodium acetate, pH 6.00, VAPOR DIFFUSION, HANGING DROP, temperature 298K
分辨率 1.60 Å R-free 0.223
2CBH DETERMINATION OF THE THREE-DIMENSIONAL STRUCTURE OF THE C-TERMINAL DOMAIN OF CELLOBIOHYDROLASE I FROM TRICHODERMA REESEI. A STUDY USING NUCLEAR MAGNETIC RESONANCE AND HYBRID DISTANCE GEOMETRY-DYNAMICAL SIMULATED ANNEALING 提交 1989-05-30 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 478–513(36 aa)
未记录 未记录非水小分子 SOLUTION NMR mmCIF 未提供已读取条件 分辨率未提供
2CEL ACTIVE-SITE MUTANT E212Q DETERMINED AT PH 6.0 WITH NO LIGAND BOUND IN THE ACTIVE SITE 提交 1996-08-24 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 19–451(433 aa) 片段:CATALYTIC DOMAIN, RESIDUES 1 - 434
突变:E212Q 非标准单体:是(mmCIF未提供具体位点) NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 CA CALCIUM ION × 1 X-RAY DIFFRACTION
X-ray结晶条件 pH 6;4.5 MM MES PH 6.0, 4.5% MONOMETHYL ETHER PEG 5000, 4.5 MM CACL2
分辨率 2.00 Å R-free 0.208
2CEL ACTIVE-SITE MUTANT E212Q DETERMINED AT PH 6.0 WITH NO LIGAND BOUND IN THE ACTIVE SITE 提交 1996-08-24 Assembly 2 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 B 19–451(433 aa) 片段:CATALYTIC DOMAIN, RESIDUES 1 - 434
突变:E212Q 非标准单体:是(mmCIF未提供具体位点) NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 CA CALCIUM ION × 1 X-RAY DIFFRACTION
X-ray结晶条件 pH 6;4.5 MM MES PH 6.0, 4.5% MONOMETHYL ETHER PEG 5000, 4.5 MM CACL2
分辨率 2.00 Å R-free 0.208
2MWJ Solution structure of Family 1 Carbohydrate-Binding Module from Trichoderma reesei Cel7A with O-mannose residues at Thr1 and Ser3 提交 2014-11-12 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 478–513(36 aa) 片段:CBM1 DOMAIN RESIDUES 478-513;
未记录 MAN alpha-D-mannopyranose × 2 SOLUTION NMR
NMR测量条件 pH 5;300 K;离子强度(mmCIF原始值)30;压力 ambient
NMR测量条件 pH 5;288 K;离子强度(mmCIF原始值)30;压力 ambient
NMR样品组成 1.7 mg CBM_2M, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR样品组成 1.7 mg CBM_2M, 100% D2O | 100% D2O
分辨率未提供
2MWK Family 1 Carbohydrate-Binding Module from Trichoderma reesei Cel7A with O-mannose residues at Thr1, Ser3, and Ser14 提交 2014-11-12 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 478–513(36 aa) 片段:CBM1 domain residues 478-513
未记录 MAN alpha-D-mannopyranose × 3 SOLUTION NMR
NMR测量条件 pH 5;300 K;离子强度(mmCIF原始值)30;压力 ambient
NMR测量条件 pH 5;288 K;离子强度(mmCIF原始值)30;压力 ambient
NMR样品组成 1.5 mg CBM_3M, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR样品组成 1.5 mg CBM_3M, 100% D2O | 100% D2O
分辨率未提供
2V3I Hypocrea jecorina Cel7A in complex with (R)-dihydroxy-phenanthrenolol 提交 2007-06-18 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 18–451(434 aa) 片段:CATALYTIC MODULE, RESIDUES 18-451
非标准单体:是(mmCIF未提供具体位点) NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 CO COBALT (II) ION × 2 GOL GLYCEROL × 1 XX6 2-{[(2R)-2-HYDROXY-3-(9-PHENANTHRYLOXY)PROPYL]AMINO}PROPANE-1,3-DIOL × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 5;298 K;POLYETHYLENE GLYCOL MONOMETHYL ETHER 5000, GLYCEROL, COBALT CHLORIDE, SODIUM ACETATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298 K
分辨率 1.05 Å R-free 0.140
2V3R Hypocrea jecorina Cel7A in complex with (S)-dihydroxy-phenanthrenolol 提交 2007-06-21 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 18–451(434 aa) 片段:CATALYTIC MODULE, RESIDUES 18-451
非标准单体:是(mmCIF未提供具体位点) NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 CO COBALT (II) ION × 2 XX7 2-{[(2S)-2-HYDROXY-3-(9-PHENANTHRYLOXY)PROPYL]AMINO}PROPANE-1,3-DIOL × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 5;298 K;POLYETHYLENE GLYCOL MONOMETHYL ETHER, GLYCEROL, COBALT CHLORIDE, SODIUM ACETATE PH 5.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298 K
分辨率 1.60 Å R-free 0.179
4C4C Michaelis complex of Hypocrea jecorina CEL7A E217Q mutant with cellononaose spanning the active site 提交 2013-09-05 Assembly 1 其他组合 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 18–451(434 aa) 片段:CATALYTIC MODULE, RESIDUES 18-451
突变:YES 非标准单体:是(mmCIF未提供具体位点) CO COBALT (II) ION × 3 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 PEG DI(HYDROXYETHYL)ETHER × 3 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6;0.1 M MES (PH 6.0), 20% MONOMETHYL ETHER PEG 5000, 0.01 M COCL2, 12% GLYCEROL., VAPOR DIFFUSION - HANGING DROP
分辨率 1.45 Å R-free 0.196
4C4D Covalent glycosyl-enzyme intermediate of Hypocrea jecorina Cel7a E217Q mutant trapped using DNP-2-deoxy-2-fluoro-cellotrioside 提交 2013-09-05 Assembly 1 其他组合 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 18–451(434 aa) 片段:CATALYTIC MODULE, RESIDUES 18-451
突变:YES 非标准单体:是(mmCIF未提供具体位点) CO COBALT (II) ION × 3 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 PEG DI(HYDROXYETHYL)ETHER × 1 X-RAY DIFFRACTION
X-ray结晶条件 pH 6;PROTEIN FIRST INCUBATED WITH 80 UM 2,4-DINITROPHENYL-2-DEOXY-2-FLUORO-BETA-CELLOTRIOSIDE (DNP-2F-G3)4 IN 10 MM SODIUM MES, PH 6.0. ALIQUOTS WERE TAKEN AT REGULAR TIME INTERVALS AND CONCENTRATED FOR CRYSTALLISATION IN THE PRESENCE OF 1 MM FRESH DNP-2F-G3 ADDED TO THE CRYSTALLISATION DROPS. CRYSTALLISATION CONDITION: 0.1 M MES (PH 6.0), 20% MONOMETHYL ETHER PEG 5000, 0.01 M COCL2, 12% GLYCEROL.
分辨率 1.32 Å R-free 0.187
4CEL ACTIVE-SITE MUTANT D214N DETERMINED AT PH 6.0 WITH NO LIGAND BOUND IN THE ACTIVE SITE 提交 1996-08-24 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 19–451(433 aa) 片段:CATALYTIC DOMAIN, RESIDUES 1 - 434
突变:D214N 非标准单体:是(mmCIF未提供具体位点) NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 CA CALCIUM ION × 2 X-RAY DIFFRACTION
X-ray结晶条件 pH 6;4.5 MM MES PH 6.0, 9% PEG 6000, 4.5 MM CACL2
分辨率 2.20 Å R-free 0.239
4CEL ACTIVE-SITE MUTANT D214N DETERMINED AT PH 6.0 WITH NO LIGAND BOUND IN THE ACTIVE SITE 提交 1996-08-24 Assembly 2 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 B 19–451(433 aa) 片段:CATALYTIC DOMAIN, RESIDUES 1 - 434
突变:D214N 非标准单体:是(mmCIF未提供具体位点) NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 CA CALCIUM ION × 2 X-RAY DIFFRACTION
X-ray结晶条件 pH 6;4.5 MM MES PH 6.0, 9% PEG 6000, 4.5 MM CACL2
分辨率 2.20 Å R-free 0.239
4D5I Hypocrea jecorina cellobiohydrolase Cel7A E212Q soaked with xylotriose. 提交 2014-11-05 Assembly 1 其他组合 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 18–451(434 aa) 片段:CATALYTIC MODULE, RESIDUES 18-451
突变:YES 非标准单体:是(mmCIF未提供具体位点) CO COBALT (II) ION × 4 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 PEG DI(HYDROXYETHYL)ETHER × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6;298 K;0.1 M NA-MES (PH 6.0), 20% MONOMETHYL ETHER PEG 5000, 0.01 M COCL2, 12.5% GLYCEROL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K
分辨率 1.42 Å R-free 0.230
4D5J Hypocrea jecorina cellobiohydrolase Cel7A E217Q soaked with xylotriose. 提交 2014-11-05 Assembly 1 其他组合 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 18–451(434 aa) 片段:CATALYTIC MODULE, RESIDUES 18-451
突变:YES 非标准单体:是(mmCIF未提供具体位点) CO COBALT (II) ION × 4 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6;0.1 M MES (PH 6.0), 20% MONOMETHYL ETHER PEG 5000, 0.01 M COCL2, 12.5% GLYCEROL, VAPOR DIFFUSION - HANGING DROP
分辨率 1.50 Å R-free 0.199
4D5O Hypocrea jecorina cellobiohydrolase Cel7A E212Q soaked with xylopentaose. 提交 2014-11-07 Assembly 1 其他组合 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 18–451(434 aa) 片段:CATALYTIC MODULE, RESIDUES 18-451
突变:YES 非标准单体:是(mmCIF未提供具体位点) CO COBALT (II) ION × 4 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 GOL GLYCEROL × 2 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6;298 K;0.1 M NA-MES (PH 6.0), 20% MONOMETHYL ETHER PEG 5000, 0.01 M COCL2, 12.5% GLYCEROL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K
分辨率 1.52 Å R-free 0.250
4D5P Hypocrea jecorina cellobiohydrolase Cel7A E217Q soaked with xylopentaose. 提交 2014-11-07 Assembly 1 其他组合 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 18–451(434 aa) 片段:CATALYTIC MODULE, RESIDUES 18-451
突变:YES 非标准单体:是(mmCIF未提供具体位点) CO COBALT (II) ION × 2 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6;0.1 M MES (PH 6.0), 20% MONOMETHYL ETHER PEG 5000, 0.01 M COCL2, 12.5% GLYCEROL. VAPOR DIFFUSION - HANGING DROP
分辨率 1.89 Å R-free 0.268
4D5Q Hypocrea jecorina Cel7A (wild type) soaked with xylopentaose. 提交 2014-11-07 Assembly 1 其他组合 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 18–451(434 aa) 片段:CATALYTIC MODULE, RESIDUES 18-451
非标准单体:是(mmCIF未提供具体位点) CO COBALT (II) ION × 4 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 XYP beta-D-xylopyranose × 2 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6;298 K;0.1 M NA-MES (PH 6.0), 20% MONOMETHYL ETHER PEG 5000, 0.01 M COCL2, 12.5% GLYCEROL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K
分辨率 1.68 Å R-free 0.186
4D5V Hypocrea jecorina cellobiohydrolase Cel7A E217Q soaked with xylotetraose. 提交 2014-11-07 Assembly 1 其他组合 同源多聚体;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 A 18–451(434 aa) 片段:CATALYTIC MODULE, RESIDUES 18-451
突变:YES [E217Q] 非标准单体:是(mmCIF未提供具体位点) CO COBALT (II) ION × 2 NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6;0.1 M MES (PH 6.0), 20% MONOMETHYL ETHER PEG 5000, 0.01 M COCL2, 12.5% GLYCEROL, VAPOR DIFFUSION - HANGING DROP
分辨率 1.62 Å R-free 0.179
4P1H Crystal structure of wild type Hypocrea jecorina Cel7a in a monoclinic crystal form 提交 2014-02-26 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 18–449(432 aa) 片段:Catalytic Domain (UNP residues 18-449)
非标准单体:是(mmCIF未提供具体位点) NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 SM SAMARIUM (III) ION × 1 BEN BENZAMIDINE × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;308 K;PEG3350, Benzamidine, Gadolinium(III) chloride hexahydrate, HEPES
分辨率 1.50 Å R-free 0.190
4P1J Crystal structure of wild type Hypocrea jecorina Cel7a in a hexagonal crystal form 提交 2014-02-26 Assembly 1 其他组合 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 18–451(434 aa) 片段:UNP residues 18-451
非标准单体:是(mmCIF未提供具体位点) NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 2 SM SAMARIUM (III) ION × 5 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;308 K;PEG 6000, Cellohexaose, Samarium(III) chloride hexahydrate, HEPES
分辨率 2.62 Å R-free 0.213
4UWT Hypocrea jecorina Cel7A E212Q mutant in complex with p-nitrophenyl cellobioside 提交 2014-08-14 Assembly 1 其他组合 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 18–451(434 aa) 片段:CATALYTIC MODULE, RESIDUES 18-451
突变:YES 非标准单体:是(mmCIF未提供具体位点) NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 CO COBALT (II) ION × 2 GOL GLYCEROL × 1 NPO P-NITROPHENOL × 2 PEG DI(HYDROXYETHYL)ETHER × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6;298 K;0.1 M NA-MES (PH 6.0), 21% MONOMETHYL ETHER PEG 5000, 0.005 M COCL2, 12% GLYCEROL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K
分辨率 1.20 Å R-free 0.159
4V0Z o-nitrophenyl Cellobioside as an Active Site Probe for Family 7 Cellobiohydrolases 提交 2014-09-19 Assembly 1 其他组合 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 18–451(434 aa) 片段:CATALYTIC MODULE, RESIDUES 18-451
非标准单体:是(mmCIF未提供具体位点) NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 CO COBALT (II) ION × 2 GOL GLYCEROL × 1 OPO O-NITROPHENOL × 2 PEG DI(HYDROXYETHYL)ETHER × 1 X-RAY DIFFRACTION
X-ray结晶条件 pH 7;0.1 M NAMES (PH 7.0), 25% M5K, 12.5% GLYCEROL AND 10 MM COCL2
分辨率 1.70 Å R-free 0.157
5OA5 CELLOBIOHYDROLASE I (CEL7A) FROM HYPOCREA JECORINA WITH IMPROVED THERMAL STABILITY 提交 2017-06-20 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 19–451(433 aa) 片段:CATALYTIC DOMAIN, RESIDUES 18-451
突变:S8P, T41I, N49S, A68T, N89D, S92T, S113N, S196T, P227L, D249K, T255P, S278P, E295K, T296P, T332Y, V304D, S411F 非标准单体:是(mmCIF未提供具体位点) NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 3 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 6;293 K;25.5% POLYETHYLENE GLYCOL (PEG) 4000, 0.17 M AMSO4 AND 15% GLYCEROL
分辨率 2.10 Å R-free 0.244
5OA5 CELLOBIOHYDROLASE I (CEL7A) FROM HYPOCREA JECORINA WITH IMPROVED THERMAL STABILITY 提交 2017-06-20 Assembly 2 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 B 19–451(433 aa) 片段:CATALYTIC DOMAIN, RESIDUES 18-451
突变:S8P, T41I, N49S, A68T, N89D, S92T, S113N, S196T, P227L, D249K, T255P, S278P, E295K, T296P, T332Y, V304D, S411F 非标准单体:是(mmCIF未提供具体位点) NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 3 GOL GLYCEROL × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 6;293 K;25.5% POLYETHYLENE GLYCOL (PEG) 4000, 0.17 M AMSO4 AND 15% GLYCEROL
分辨率 2.10 Å R-free 0.244
5X34 Solution structure of the Family 1 carbohydrate-binding module, unglycosylated form 提交 2017-02-04 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 478–513(36 aa) 片段:UNP residues 478-513
未记录 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 5;298 K;离子强度(mmCIF原始值)50;压力 1
NMR样品组成 5 mg/mL CBM, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR样品组成 5 mg/mL CBM, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 100% D2O | 100% D2O
分辨率未提供
5X35 Solution structure of the Family 1 carbohydrate-binding module with mannosylated Thr1 提交 2017-02-04 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 478–513(36 aa) 片段:UNP residues 478-513
未记录 MAN alpha-D-mannopyranose × 1 SOLUTION NMR
NMR测量条件 pH 5;298 K;离子强度(mmCIF原始值)50;压力 1
NMR样品组成 5 mg/mL CBM, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR样品组成 5 mg/mL CBM, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 100% D2O | 100% D2O
分辨率未提供
5X36 Solution structure of the Family 1 carbohydrate-binding module with mannosylated Ser3 提交 2017-02-04 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 478–513(36 aa) 片段:UNP residues 478-513
未记录 MAN alpha-D-mannopyranose × 1 SOLUTION NMR
NMR测量条件 pH 5;298 K;离子强度(mmCIF原始值)50;压力 1
NMR样品组成 5 mg/mL CBM, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR样品组成 5 mg/mL CBM, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 100% D2O | 100% D2O
分辨率未提供
5X37 Solution structure of the Family 1 carbohydrate-binding module with mannosylated Ser14 提交 2017-02-04 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 478–513(36 aa) 片段:UNP residues 478-513
未记录 MAN alpha-D-mannopyranose × 1 SOLUTION NMR
NMR测量条件 pH 5;298 K;离子强度(mmCIF原始值)50;压力 1
NMR样品组成 5 mg/mL CBM, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR样品组成 5 mg/mL CBM, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 100% D2O | 100% D2O
分辨率未提供
5X38 Solution structure of the Family 1 carbohydrate-binding module with glucosylated Ser3 提交 2017-02-04 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 478–513(36 aa) 片段:UNP residues 478-513
未记录 BGC beta-D-glucopyranose × 1 SOLUTION NMR
NMR测量条件 pH 5;298 K;离子强度(mmCIF原始值)50;压力 1
NMR样品组成 5 mg/mL CBM, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR样品组成 5 mg/mL CBM, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 100% D2O | 100% D2O
分辨率未提供
5X39 Solution structure of the Family 1 carbohydrate-binding module Q2A mutant with mannosylated Ser3 提交 2017-02-04 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 478–513(36 aa) 片段:UNP residues 478-513
突变:Q2A MAN alpha-D-mannopyranose × 1 SOLUTION NMR
NMR测量条件 pH 5;298 K;离子强度(mmCIF原始值)50;压力 1
NMR样品组成 5 mg/mL CBM-Q2A, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR样品组成 5 mg/mL CBM-Q2A, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 100% D2O | 100% D2O
分辨率未提供
5X3C Solution structure of the Family 1 carbohydrate-binding module Y5A mutant with mannosylated Ser3 提交 2017-02-04 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 478–513(36 aa) 片段:UNP residues 478-513
突变:Y5A MAN alpha-D-mannopyranose × 1 SOLUTION NMR
NMR测量条件 pH 5;298 K;离子强度(mmCIF原始值)50;压力 1
NMR样品组成 5 mg/mL CBM-Y5A, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR样品组成 5 mg/mL CBM-Y5A, 50 mM [U-2H] sodium acetate, 0.1 mg/mL DSS, 100% D2O | 100% D2O
分辨率未提供
6GRN CELLOBIOHYDROLASE I (CEL7A) FROM Trichoderma reesei with S-dihydroxypropranolol in the active site 提交 2018-06-11 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 19–451(433 aa)
非标准单体:是(mmCIF未提供具体位点) NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 CO COBALT (II) ION × 2 F9B 2-[[(2~{S})-3-naphthalen-1-yloxy-2-oxidanyl-propyl]amino]propane-1,3-diol × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 5;293 K;18% mPEG 5000, 10 mM sodium acetate (ph 5.0), 14% glycerol, 11 mM cobalt chloride
分辨率 1.79 Å R-free 0.188
7NYT Trichoderma reesei Cel7A E212Q mutant in complex with lactose. 提交 2021-03-23 Assembly 1 其他组合 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 18–451(434 aa)
突变:E212Q 非标准单体:是(mmCIF未提供具体位点) NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 BGC beta-D-glucopyranose × 1 GAL beta-D-galactopyranose × 1 NPO P-NITROPHENOL × 1 CO COBALT (II) ION × 2 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6;294 K;50 mM morpholinoethane sulphonic acid (pH 6.0), 21.25% polyethylene glycol 5000 monomethyl ether, 12.5% glycerol, 5 mM cobalt chloride
分辨率 1.09 Å R-free 0.142
7OC8 Trichoderma reesei Cel7A E212Q mutant in complex with pNPL 提交 2021-04-26 Assembly 1 其他组合 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 18–451(434 aa)
突变:E212Q 非标准单体:是(mmCIF未提供具体位点) NAG 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 NPO P-NITROPHENOL × 2 CO COBALT (II) ION × 4 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;pH 6;294 K;50 mM morpholinoethane sulphonic acid(pH 6.0), 21.25% polyethylene glycol 5000 monomethyl ether, 12.5% glycerol, 5 mM cobalt chloride
分辨率 1.60 Å R-free 0.184
7YHF Solution structure of S3C mutant of carbohydrate binding module (CBM) of the glycoside hydrolase Family 7 cellobiohydrolase from Trichoderma reesei 提交 2022-07-13 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 478–513(36 aa)
突变:S3C 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 5;298 K;离子强度(mmCIF原始值)50;压力 1
NMR样品组成 4 mg/mL CBMS3C, 50 mM [U-100% 2H] sodium acetate, 0.01 % w/v DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR样品组成 2 mg/mL CBMS3C, 50 mM [U-100% 2H] sodium acetate, 0.01 % w/v DSS, 100% D2O | 100% D2O
分辨率未提供
7YHG Solution structure of S-mono-mannosylated S3C mutant of carbohydrate binding module (CBM) of the glycoside hydrolase Family 7 cellobiohydrolase from Trichoderma reesei 提交 2022-07-13 Assembly 1 蛋白单体 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 478–513(36 aa)
未记录 MAN alpha-D-mannopyranose × 1 SOLUTION NMR
NMR测量条件 pH 5;298 K;离子强度(mmCIF原始值)50;压力 1
NMR样品组成 4 mg/mL CBMS3C-Man, 50 mM [U-100% 2H] sodium acetate, 0.01 % w/v DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR样品组成 4 mg/L CBMS3C-Man, 50 mM [U-100% 2H] sodium acetate, 0.01 % w/v DSS, 100% D2O | 100% D2O
分辨率未提供
7YHH Solution structure of S-di-mannosylated S3C mutant of carbohydrate binding module (CBM) of the glycoside hydrolase Family 7 cellobiohydrolase from Trichoderma reesei 提交 2022-07-13 Assembly 1 其他组合 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 478–513(36 aa)
未记录 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 5;298 K;离子强度(mmCIF原始值)50;压力 1
NMR样品组成 4 mg/mL CBMS3C-ManMan, 50 mM [U-100% 2H] sodium acetate, 0.01 % w/v DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR样品组成 4 mg/mL CBMS3C-ManMan, 50 mM [U-100% 2H] sodium acetate, 0.01 % w/v DSS, 100% D2O | 100% D2O
分辨率未提供
7YHI Solution structure of O-di-mannosylated carbohydrate binding module (CBM) of the glycoside hydrolase Family 7 cellobiohydrolase from Trichoderma reesei 提交 2022-07-13 Assembly 1 其他组合 单体;蛋白 × 1 PDB 声明:monomeric(1) 与蛋白数一致
链 A 478–513(36 aa) 片段:UNP residues 478-513
未记录 未记录非水小分子 SOLUTION NMR
NMR测量条件 pH 5;298 K;离子强度(mmCIF原始值)50;压力 1
NMR样品组成 4 mg/mL CBM020, 50 mM [U-100% 2H] sodium acetate, 0.01 % w/v DSS, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR样品组成 4 mg/mL CBM020, 50 mM [U-100% 2H] sodium acetate, 0.01 % w/v DSS, 100% D2O | 100% D2O
分辨率未提供