Current Protein Identity：Q9P000
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Difference tags compare only the current result set; every original PDB and assembly record remains separate.
Related-Structure Differences
Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.
| PDB Entry | Assembly / Oligomeric State | Construct | Mutations and Modifications | Ligands, Ions and Non-polymers | Experimental Method | Experimental Conditions | Structure Quality |
|---|---|---|---|---|---|---|---|
| 4NKN The Crystal Structure of the N-terminal domain of COMMD9 Deposited 2013-11-12 | Assembly 1 Protein homooligomer Homooligomer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain A
2–117（116 aa）
Fragment：N-terminal domain (UNP residues 1-116)
Chain B
2–117（116 aa）
Fragment：N-terminal domain (UNP residues 1-116)
Chain E
2–117（116 aa）
Fragment：N-terminal domain (UNP residues 1-116)
|
Mutation：L67M, I101M Non-standard monomer：Yes (specific site not provided by mmCIF) Mutation：L67M, I101M Non-standard monomer：Yes (specific site not provided by mmCIF) Mutation：L67M, I101M Non-standard monomer：Yes (specific site not provided by mmCIF) | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 8；291.15 K；20% PEG 3350, 0.2M Mg Nitrate, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 291.15K
|
Resolution 2.79 Å R-free 0.249 |
| 4NKN The Crystal Structure of the N-terminal domain of COMMD9 Deposited 2013-11-12 | Assembly 2 Protein homooligomer Homooligomer；Protein × 3 PDB declaration: trimeric（3） Consistent with protein count |
Chain C
2–117（116 aa）
Fragment：N-terminal domain (UNP residues 1-116)
Chain D
2–117（116 aa）
Fragment：N-terminal domain (UNP residues 1-116)
Chain F
2–117（116 aa）
Fragment：N-terminal domain (UNP residues 1-116)
|
Mutation：L67M, I101M Non-standard monomer：Yes (specific site not provided by mmCIF) Mutation：L67M, I101M Non-standard monomer：Yes (specific site not provided by mmCIF) Mutation：L67M, I101M Non-standard monomer：Yes (specific site not provided by mmCIF) | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 8；291.15 K；20% PEG 3350, 0.2M Mg Nitrate, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 291.15K
|
Resolution 2.79 Å R-free 0.249 |
| 4OE9 The crystal structure of the n-terminal domain of COMMD9 Deposited 2014-01-12 | Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain A
1–117（117 aa）
Fragment：COMMD9, unp residues 1-117
|
Mutation：L67M, I101M Non-standard monomer：Yes (specific site not provided by mmCIF) | CIT CITRIC ACID × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 4.9；291.15 K；28% mPEG 5000, 0.2M citric acid, pH 4.9, VAPOR DIFFUSION, HANGING DROP, temperature 291.15K
|
Resolution 1.55 Å R-free 0.165 |
| 4OE9 The crystal structure of the n-terminal domain of COMMD9 Deposited 2014-01-12 | Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric（1） Consistent with protein count |
Chain B
1–117（117 aa）
Fragment：COMMD9, unp residues 1-117
|
Mutation：L67M, I101M Non-standard monomer：Yes (specific site not provided by mmCIF) | CIT CITRIC ACID × 1 K POTASSIUM ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 4.9；291.15 K；28% mPEG 5000, 0.2M citric acid, pH 4.9, VAPOR DIFFUSION, HANGING DROP, temperature 291.15K
|
Resolution 1.55 Å R-free 0.165 |
| 6BP6 Crystal structure of Commd9 COMM domain Deposited 2017-11-22 | Assembly 1 Protein homooligomer Homooligomer；Protein × 8 PDB declaration: octameric（8） Consistent with protein count |
Chain A
115–198（84 aa）
Chain B
115–198（84 aa）
|
Non-standard monomer：Yes (specific site not provided by mmCIF) Non-standard monomer：Yes (specific site not provided by mmCIF) | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；pH 8；293 K；0.1 M HEPES (pH 7.0), 6% Jeffamine M-600
|
Resolution 2.17 Å R-free 0.285 |
| 8ESD Crystal structure of COMMD7-COMMD9-COMMD5-COMMD10 tetramer Deposited 2022-10-13 | Assembly 1 Protein heterocomplex Heteromer；Protein × 4 PDB declaration: tetrameric（4） Consistent with protein count |
Chain N
5–198（194 aa）
|
Not recorded | No recorded non-water small molecule | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP；293.15 K；2 uM crown ether and 10% glycerol and grown in 22% ethanol and 5 mM EDTA
|
Resolution 3.33 Å R-free 0.278 |
| 8F2R Human CCC complex Deposited 2022-11-08 | Assembly 1 Protein heterocomplex Heteromer；Protein × 10 PDB declaration: decameric（10） Consistent with protein count |
Chain I
1–198（198 aa）
|
Not recorded | No recorded non-water small molecule | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7.2；50 mM HEPES pH7.2, 150 mM NaCl, 2mM beta-mercaptoethanol, 0.01% Triton-X100
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.12 Å |
| 8F2U Human CCC complex Deposited 2022-11-08 | Assembly 1 Protein heterocomplex Heteromer；Protein × 12 PDB declaration: dodecameric（12） Consistent with protein count |
Chain I
1–198（198 aa）
|
Not recorded | No recorded non-water small molecule | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7.2；50 mM HEPES pH7.2, 150 mM NaCl, 2mM beta-mercaptoethanol, 0.01% Triton-X100
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.53 Å |
| 8P0W Structure of the human Commander complex COMMD ring Deposited 2023-05-11 | Assembly 1 Protein heterocomplex Heteromer；Protein × 12 PDB declaration: dodecameric（12） Consistent with protein count |
Chain I
1–198（198 aa）
|
Not recorded | No recorded non-water small molecule | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 2.90 Å |