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1aua

PHOSPHATIDYLINOSITOL TRANSFER PROTEIN SEC14P FROM SACCHAROMYCES CEREVISIAE

Method: X-RAY DIFFRACTION D_max: 61.9 Å Quality: EXCELLENT

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1aua
deposition_date	1997-08-20
title	PHOSPHATIDYLINOSITOL TRANSFER PROTEIN SEC14P FROM SACCHAROMYCES CEREVISIAE
keywords	PHOSPHOLIPID-BINDING PROTEIN, PERIPHERAL GOLGI MEMBRANE PROTEIN, PHOSPHOLIPID EXCHANGE, GOLGI-DERIVED SECRETORY VESICLE BIOGENESIS; PHOSPHOLIPID-BINDING PROTEIN
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	20.22 Å
rg_electron	19.25 Å
i0	19642100.00
molecular_weight	34581.0 kDa
excluded_volume	43666 Å³
envelope_volume	51323 Å³
shell_volume	21920 Å³
envelope_diameter	64.2 Å
shell_rg	26.00 Å
envelope_rg	19.38 Å
shape_rg	19.24 Å
total_rg	20.22 Å
total_atoms	2440
n_residues	296
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	61.9 Å
rg_real	20.09 Å
rg_real_error	0.31 Å
i0_real	1.9640e+07
i0_real_error	2.3970e+05
rg_reciprocal	20.11 Å
i0_reciprocal	19640000.0000
total_estimate	0.9020
solution_quality	EXCELLENT a EXCELLENT solution
n_peaks	2
r_peak_primary	26.5 Å
skewness	0.132
kurtosis	-0.434
angular_range	— – 0.3950 Å⁻¹
current_alpha	0.0000
highest_alpha	4434000.0000
n_real_points	71
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.917; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.980; Smooth: 0.991

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4. Crystallography & Experiment

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5. Entities & Polymer Info (3)

Entity 1 polymer

description	PHOSPHATIDYLINOSITOL TRANSFER PROTEIN SEC14P
formula_weight	34045.6 kDa
src_method	man
entity_count	1

Polymer

type	polypeptide(L)
strand_id	A
atom_count	2493

QQEKEFLESYPQNCPPDALPGTPGNLDSAQEKALAELRKLLEDAGFIERLDDSTLLRFLRARKFDVQLAKEMFENCEKWRKDYGTDTILQDFHYDEKPLIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGISISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLPVKFGGKSEVDESKGGLYLSDIGPWRDPKYIGPEGEAPE

Source

organism	Saccharomyces cerevisiae
common_name	;baker's yeast ;
ncbi_taxonomy_id	4932
host_organism	Escherichia coli

Entity 2 non-polymer

description	octyl beta-D-glucopyranoside
formula_weight	292.4 kDa
src_method	man
entity_count	2

Entity 3 water

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	53

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6. Citations (1)

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length_a	88.971 Å
length_b	88.971 Å
length_c	111.339 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	120.00 °
z_pdb	6

space_group	P 32 2 1
int_tables_number	154
crystal_system	—

resolution	2.500 Å
resolution_low	30.000 Å
r_factor	0.2110
r_work	0.2110
r_free	0.2730

fit	/app/data/saxs_computation/au/1aua/1aua.fit
pddf	/app/data/pr_computation/au/1aua/1aua.pr.out
profile	/app/data/saxs_computation/au/1aua/1aua.dat

PHOSPHATIDYLINOSITOL TRANSFER PROTEIN SEC14P FROM SACCHAROMYCES CEREVISIAE

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction