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1bvw

CELLOBIOHYDROLASE II (CEL6A) FROM HUMICOLA INSOLENS

Method: X-RAY DIFFRACTION D_max: 62.5 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1bvw
deposition_date	1998-09-19
title	CELLOBIOHYDROLASE II (CEL6A) FROM HUMICOLA INSOLENS
keywords	CELLULOSE DEGRADATION, CELLOBIOHYDROLASE, CELLULASE, GLYCOSIDE HYDROLASE FAMILY 6, HYDROLASE; HYDROLASE
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	20.46 Å
rg_electron	19.31 Å
i0	28324500.00
molecular_weight	40340.0 kDa
excluded_volume	50138 Å³
envelope_volume	55739 Å³
shell_volume	23341 Å³
envelope_diameter	64.2 Å
shell_rg	26.52 Å
envelope_rg	19.47 Å
shape_rg	19.27 Å
total_rg	20.29 Å
total_atoms	2850
n_residues	360
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	62.5 Å
rg_real	20.29 Å
rg_real_error	0.23 Å
i0_real	2.8320e+07
i0_real_error	2.8780e+05
rg_reciprocal	20.32 Å
i0_reciprocal	28320000.0000
total_estimate	0.8962
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	27.7 Å
skewness	0.050
kurtosis	-0.474
angular_range	— – 0.3900 Å⁻¹
current_alpha	0.0000
highest_alpha	6862000.0000
n_real_points	71
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.899; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.971; Smooth: 0.979

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4. Crystallography & Experiment

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5. Entities & Polymer Info (6)

Entity 1 polymer

description	PROTEIN (CELLOBIOHYDROLASE II)
formula_weight	39737.2 kDa
ec_number	3.2.1.91
src_method	man
entity_count	1

Polymer

type	polypeptide(L)
strand_id	A
atom_count	3403

GNPFEGVQLWANNYYRSEVHTLAIPQITDPALRAAASAVAEVPSFQWLDRNVTVDTLLVQTLSEIREANQAGANPQYAAQIVVYDLPDRDCAAAASNGEWAIANNGVNNYKAYINRIREILISFSDVRTILVIEPDSLANMVTNMNVPKCSGAASTYRELTIYALKQLDLPHVAMYMDAGHAGWLGWPANIQPAAELFAKIYEDAGKPRAVRGLATNVANYNAWSVSSPPPYTSPNPNYDEKHYIEAFRPLLEARGFPAQFIVDQGRSGKQPTGQKEWGHWCNAIGTGFGMRPTANTGHQYVDAFVWVKPGGECDGTSDTTAARYDYHCGLEDALKPAPEAGQWFNEYFIQLLRNANPPF

Source

organism	Humicola insolens
ncbi_taxonomy_id	34413
host_organism	Aspergillus oryzae

Entity 2 non-polymer

description	alpha-D-mannopyranose
formula_weight	180.2 kDa
src_method	man
entity_count	2

Entity 3 non-polymer

description	2-acetamido-2-deoxy-beta-D-glucopyranose
formula_weight	221.2 kDa
src_method	man
entity_count	1

Entity 4 non-polymer

description	MAGNESIUM ION
formula_weight	24.3 kDa
src_method	syn
entity_count	1

Entity 5 non-polymer

description	GLYCEROL
formula_weight	92.1 kDa
src_method	syn
entity_count	1

Entity 6 water

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	531

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6. Citations (1)

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length_a	47.510 Å
length_b	68.100 Å
length_c	53.710 Å
angle_alpha	90.00 °
angle_beta	110.93 °
angle_gamma	90.00 °
z_pdb	2

space_group	P 1 21 1
int_tables_number	4
crystal_system	—

resolution	1.920 Å
resolution_low	15.000 Å
r_factor	—
r_work	0.1420
r_free	0.2100

fit	/app/data/saxs_computation/bv/1bvw/1bvw.fit
pddf	/app/data/pr_computation/bv/1bvw/1bvw.pr.out
profile	/app/data/saxs_computation/bv/1bvw/1bvw.dat