1de7
INTERACTION OF FACTOR XIII ACTIVATION PEPTIDE WITH ALPHA-THROMBIN: CRYSTAL STRUCTURE OF THE ENZYME-SUBSTRATE COMPLEX
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 1de7 |
| deposition_date | 1999-11-13 |
| title | INTERACTION OF FACTOR XIII ACTIVATION PEPTIDE WITH ALPHA-THROMBIN: CRYSTAL STRUCTURE OF THE ENZYME-SUBSTRATE COMPLEX |
| keywords | ;ENZYME-SUBSTRATE COMPLEX, ALPHA-THROMBIN, FACTOR XIII ACTIVATION PEPTIDE, HYDROLASE/PEPTIDE, BLOOD CLOTTING, HYDROLASE-HYDROLASE SUBSTRATE complex ;; HYDROLASE/HYDROLASE SUBSTRATE |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 28.37 Å |
| rg_electron | 28.04 Å |
| i0 | 134674000.00 |
| molecular_weight | 61275.0 kDa |
| excluded_volume | 59147 ų |
| envelope_volume | 98604 ų |
| shell_volume | 29985 ų |
| envelope_diameter | 101.2 Å |
| shell_rg | 34.46 Å |
| envelope_rg | 28.09 Å |
| shape_rg | 28.06 Å |
| total_rg | 28.48 Å |
| total_atoms | 4635 |
| n_residues | 572 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 94.0 Å |
| rg_real | 28.54 Å |
| rg_real_error | 0.77 Å |
| i0_real | 1.3470e+08 |
| i0_real_error | 2.1090e+06 |
| rg_reciprocal | 28.49 Å |
| i0_reciprocal | 134700000.0000 |
| total_estimate | 0.7776 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 3 |
| r_peak_primary | 26.9 Å |
| skewness | 0.436 |
| kurtosis | -0.500 |
| angular_range | — – 0.2800 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 43080000.0000 |
| n_real_points | 57 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.748; Stabil: 0.999; Sysdev: 1.000; Positv: 1.000; Valcen: 0.863; Smooth: 0.000 |