STRUCTURE OF THE RXR/RAR DNA-BINDING DOMAIN HETERODIMER IN COMPLEX WITH THE RETINOIC ACID RESPONSE ELEMENT DR1

entry_id	1dsz
deposition_date	2000-01-10
title	STRUCTURE OF THE RXR/RAR DNA-BINDING DOMAIN HETERODIMER IN COMPLEX WITH THE RETINOIC ACID RESPONSE ELEMENT DR1
keywords	RXR, RAR, nuclear receptor, protein-DNA, retinoic acid, TRANSCRIPTION-DNA COMPLEX; TRANSCRIPTION/DNA
method	X-RAY DIFFRACTION

rg_guinier	20.07 Å
rg_electron	19.90 Å
i0	21365700.00
molecular_weight	27380.0 kDa
excluded_volume	30845 ų
envelope_volume	39512 ų
shell_volume	17265 ų
envelope_diameter	71.3 Å
shell_rg	25.50 Å
envelope_rg	20.12 Å
shape_rg	19.88 Å
total_rg	20.60 Å
total_atoms	1855
n_residues	189
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	69.8 Å
rg_real	20.12 Å
rg_real_error	0.57 Å
i0_real	2.1370e+07
i0_real_error	3.0240e+05
rg_reciprocal	20.11 Å
i0_reciprocal	21370000.0000
total_estimate	0.8616
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	20.9 Å
skewness	0.432
kurtosis	-0.258
angular_range	— – 0.3950 Å−1
current_alpha	0.0000
highest_alpha	3562000.0000
n_real_points	71
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.775; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.918; Smooth: 0.954

Unit Cell

length_a	80.660 Å
length_b	33.900 Å
length_c	101.860 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	4

Symmetry

space_group	P 21 21 21
int_tables_number	19
crystal_system	—

Refinement

resolution	1.700 Å
resolution_low	20.000 Å
r_factor	0.2010
r_work	0.1980
r_free	0.2670

Diffraction

temperature

113.0 K

Files (7)

• pr_distribution /app/data/pr_computation/ds/1dsz/pr_distribution.json
• pr_output /app/data/pr_computation/ds/1dsz/1dsz.pr.out
• pr_plot /app/data/visualization/pr_computation/ds/1dsz/1dsz_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/ds/1dsz/1dsz.dat
• saxs_fit /app/data/saxs_computation/ds/1dsz/1dsz.fit
• saxs_log /app/data/saxs_computation/ds/1dsz/1dsz.log
• saxs_plot /app/data/visualization/saxs_computation/ds/1dsz/1dsz_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/ds/1dsz/1dsz.fit
pddf	/app/data/pr_computation/ds/1dsz/1dsz.pr.out
profile	/app/data/saxs_computation/ds/1dsz/1dsz.dat