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1dz4

ferric p450cam from pseudomonas putida

Method: X-RAY DIFFRACTION D_max: 110.1 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1dz4
deposition_date	2000-02-16
title	ferric p450cam from pseudomonas putida
keywords	OXIDOREDUCTASE, MONO-OXYGENASE, HEME, FERRIC; OXIDOREDUCTASE
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	33.82 Å
rg_electron	33.39 Å
i0	132276000.00
molecular_weight	92815.0 kDa
excluded_volume	116310 Å³
envelope_volume	141630 Å³
shell_volume	36664 Å³
envelope_diameter	118.6 Å
shell_rg	38.54 Å
envelope_rg	33.29 Å
shape_rg	33.41 Å
total_rg	33.70 Å
total_atoms	6527
n_residues	809
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	110.1 Å
rg_real	33.99 Å
rg_real_error	0.92 Å
i0_real	1.3230e+08
i0_real_error	2.2260e+06
rg_reciprocal	33.89 Å
i0_reciprocal	132300000.0000
total_estimate	0.8475
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	30.5 Å
skewness	0.446
kurtosis	-0.499
angular_range	— – 0.2350 Å⁻¹
current_alpha	0.0000
highest_alpha	38880000.0000
n_real_points	48
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.840; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.850; Smooth: 0.645

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4. Crystallography & Experiment

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5. Entities & Polymer Info (6)

Entity 1 polymer

description	CYTOCHROME P450-CAM
formula_weight	46587.9 kDa
src_method	man
entity_count	2

Polymer

type	polypeptide(L)
strand_id	A,B
atom_count	7204

TTETIQSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQESNVPDLVWTRCNGGHWIATRGQLIREAYEDYRHFSSECPFIPREAGEAYDFIPTSMDPPEQRQFRALANQVVGMPVVDKLENRIQELACSLIESLRPQGQCNFTEDYAEPFPIRIFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVNGRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIQRPERIPAACEELLRRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPDFSIAPGAQIQHKSGIVSGVQALPLVWDPATTKAV

Source

organism	PSEUDOMONAS PUTIDA
ncbi_taxonomy_id	303
host_organism	ESCHERICHIA COLI

Entity 2 non-polymer

description	PROTOPORPHYRIN IX CONTAINING FE
formula_weight	616.5 kDa
src_method	syn
entity_count	2

Entity 3 non-polymer

description	CAMPHOR
formula_weight	152.2 kDa
src_method	syn
entity_count	2

Entity 4 non-polymer

description	2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
formula_weight	122.1 kDa
src_method	syn
entity_count	1

Entity 5 non-polymer

description	POTASSIUM ION
formula_weight	39.1 kDa
src_method	syn
entity_count	3

Entity 6 water

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	673

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6. Citations (3)

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length_a	67.400 Å
length_b	62.700 Å
length_c	95.500 Å
angle_alpha	90.00 °
angle_beta	90.65 °
angle_gamma	90.00 °
z_pdb	4

space_group	P 1 21 1
int_tables_number	4
crystal_system	—

resolution	1.600 Å
resolution_low	20.000 Å
r_factor	—
r_work	0.1860
r_free	0.2370

fit	/app/data/saxs_computation/dz/1dz4/1dz4.fit
pddf	/app/data/pr_computation/dz/1dz4/1dz4.pr.out
profile	/app/data/saxs_computation/dz/1dz4/1dz4.dat