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1e96

Structure of the Rac/p67phox complex

Method: X-RAY DIFFRACTION D_max: 79.8 Å Quality: REASONABLE

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1e96
deposition_date	2000-10-10
title	Structure of the Rac/p67phox complex
keywords	SIGNALING PROTEIN, SIGNALLING COMPLEX, GTPASE, NADPH OXIDASE, PROTEIN-PROTEIN COMPLEX, TPR MOTIF; SIGNALING PROTEIN
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	23.53 Å
rg_electron	22.84 Å
i0	27699300.00
molecular_weight	41607.0 kDa
excluded_volume	52663 Å³
envelope_volume	62799 Å³
shell_volume	23324 Å³
envelope_diameter	78.7 Å
shell_rg	29.20 Å
envelope_rg	22.94 Å
shape_rg	22.83 Å
total_rg	23.69 Å
total_atoms	2921
n_residues	363
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	79.8 Å
rg_real	23.50 Å
rg_real_error	0.52 Å
i0_real	2.7700e+07
i0_real_error	3.8830e+05
rg_reciprocal	23.51 Å
i0_reciprocal	27700000.0000
total_estimate	0.7221
solution_quality	REASONABLE a REASONABLE solution
n_peaks	1
r_peak_primary	26.2 Å
skewness	0.278
kurtosis	-0.466
angular_range	— – 0.3350 Å⁻¹
current_alpha	0.0000
highest_alpha	4679000.0000
n_real_points	65
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.858; Stabil: 1.000; Sysdev: 0.286; Positv: 1.000; Valcen: 0.959; Smooth: 0.993

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4. Crystallography & Experiment

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5. Entities & Polymer Info (5)

Entity 1 polymer

description	RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1
formula_weight	21429.1 kDa
mutation	YES
src_method	man
entity_count	1

Polymer

type	polypeptide(L)
strand_id	A
atom_count	2998

PQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPPPVKKRKRKCLLL

Source

organism	HOMO SAPIENS
common_name	HUMAN
ncbi_taxonomy_id	9606
host_organism	ESCHERICHIA COLI

Entity 2 polymer

description	NEUTROPHIL CYTOSOL FACTOR 2 (NCF-2) TPR DOMAIN, RESIDUES 1-203
formula_weight	23490.5 kDa
src_method	man
entity_count	1

Polymer

type	polypeptide(L)
strand_id	B

MSLVEAISLWNEGVLAADKKDWKGALDAFSAVQDPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRHSKIDKAMECVWKQKLYEPVVIPVGKLFRPNERQVAQLAKKDYLGKAT

Source

organism	HOMO SAPIENS
common_name	HUMAN
ncbi_taxonomy_id	9606
host_organism	ESCHERICHIA COLI

Entity 3 non-polymer

description	GUANOSINE-5'-TRIPHOSPHATE
formula_weight	523.2 kDa
src_method	syn
entity_count	1

Entity 4 non-polymer

description	MAGNESIUM ION
formula_weight	24.3 kDa
src_method	syn
entity_count	1

Entity 5 water

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	77

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6. Citations (1)

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length_a	83.220 Å
length_b	83.220 Å
length_c	138.530 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	120.00 °
z_pdb	6

space_group	P 32 2 1
int_tables_number	154
crystal_system	—

resolution	2.400 Å
resolution_low	15.000 Å
r_factor	0.2480
r_work	0.2440
r_free	0.2840

fit	/app/data/saxs_computation/e9/1e96/1e96.fit
pddf	/app/data/pr_computation/e9/1e96/1e96.pr.out
profile	/app/data/saxs_computation/e9/1e96/1e96.dat

Structure of the Rac/p67phox complex

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (5)

Entity 1 polymer

Polymer

Source

Entity 2 polymer

Polymer

Source

Entity 3 non-polymer

Entity 4 non-polymer

Entity 5 water

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)