1h8h

Bovine mitochondrial F1-ATPase crystallised in the presence of 5mm AMPPNP

Method: X-RAY DIFFRACTION
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1. 蛋白身份与相关结构 Protein Identity & Related Structures

BOVINE MITOCHONDRIAL F1-ATPASE

物种未注明

UniProt P19483

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 7 BOVINE MITOCHONDRIAL F1-ATPASE × 3 (P00829) BOVINE MITOCHONDRIAL F1-ATPASE × 1 (P05631) ADENOSINE-5'-TRIPHOSPHATE × 4 MAGNESIUM ION × 5 GLYCEROL × 1 ADENOSINE-5'-DIPHOSPHATE × 1 PHOSPHATE ION × 1 water × 7 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 ATP0_BOVIN
Isoform —
PDB实体 1
链与序列区间 作者链 A; PDB构建体 1–510; UniProt 44–553 作者链 B; PDB构建体 1–510; UniProt 44–553 作者链 C; PDB构建体 1–510; UniProt 44–553

BOVINE MITOCHONDRIAL F1-ATPASE

物种未注明

UniProt P00829

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 7 BOVINE MITOCHONDRIAL F1-ATPASE × 3 (P19483) BOVINE MITOCHONDRIAL F1-ATPASE × 1 (P05631) ADENOSINE-5'-TRIPHOSPHATE × 4 MAGNESIUM ION × 5 GLYCEROL × 1 ADENOSINE-5'-DIPHOSPHATE × 1 PHOSPHATE ION × 1 water × 7 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 ATPB_BOVIN
Isoform —
PDB实体 2
链与序列区间 作者链 D; PDB构建体 1–482; UniProt 47–528 作者链 E; PDB构建体 1–482; UniProt 47–528 作者链 F; PDB构建体 1–482; UniProt 47–528

BOVINE MITOCHONDRIAL F1-ATPASE

物种未注明

UniProt P05631

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 蛋白异源复合物 异源复合物 蛋白 7 BOVINE MITOCHONDRIAL F1-ATPASE × 3 (P19483) BOVINE MITOCHONDRIAL F1-ATPASE × 3 (P00829) ADENOSINE-5'-TRIPHOSPHATE × 4 MAGNESIUM ION × 5 GLYCEROL × 1 ADENOSINE-5'-DIPHOSPHATE × 1 PHOSPHATE ION × 1 water × 7 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 ATPG_BOVIN
Isoform —
PDB实体 3
链与序列区间 作者链 G; PDB构建体 1–272; UniProt 26–297

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

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2. 结构基本信息 2. Structure Basics

条目编号 entry_id1h8h
沉积日期 deposition_date2001-02-06
结构标题 titleBovine mitochondrial F1-ATPase crystallised in the presence of 5mm AMPPNP
关键词 keywordsATP PHOSPHORYLASE, ATP PHOSPHORYLASE (H+ TRANSPORTING), ATP SYNTHASE, F1FO ATP SYNTHASE, F1-ATPASE, HYDROLASE; HYDROLASE
实验方法 methodX-RAY DIFFRACTION
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3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

1h8h__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

1h8h__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

1h8h__assembly_1__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)41.75 Å
Rg(电子密度)40.94 Å
总 Rg41.36 Å
原子数22830
残基数2979
排除体积408370 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 1h8h__assembly_1__model_1 heptameric (7) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合物信息 Entities & Polymers (9)

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6. 折叠分类 (SCOP + CATH) 38 domains

SCOP 2.08 (19 domains)

结构域编号 domain_idd1h8ha1
类 Class classa — All alpha proteins
折叠类型 Fold folda.69 — Left-handed superhelix
超家族 Superfamily superfamilya.69.1 — C-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases
家族 Family familya.69.1.1 — C-terminal domain of alpha and beta subunits of F1 ATP synthase
结构域编号 domain_idd1h8ha2
类 Class classb — All beta proteins
折叠类型 Fold foldb.49 — Domain of alpha and beta subunits of F1 ATP synthase-like
超家族 Superfamily superfamilyb.49.1 — N-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases
家族 Family familyb.49.1.1 — N-terminal domain of alpha and beta subunits of F1 ATP synthase
结构域编号 domain_idd1h8ha3
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.37 — P-loop containing nucleoside triphosphate hydrolases
超家族 Superfamily superfamilyc.37.1 — P-loop containing nucleoside triphosphate hydrolases
家族 Family familyc.37.1.11 — RecA protein-like (ATPase-domain)
结构域编号 domain_idd1h8hb1
类 Class classa — All alpha proteins
折叠类型 Fold folda.69 — Left-handed superhelix
超家族 Superfamily superfamilya.69.1 — C-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases
家族 Family familya.69.1.1 — C-terminal domain of alpha and beta subunits of F1 ATP synthase
结构域编号 domain_idd1h8hb2
类 Class classb — All beta proteins
折叠类型 Fold foldb.49 — Domain of alpha and beta subunits of F1 ATP synthase-like
超家族 Superfamily superfamilyb.49.1 — N-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases
家族 Family familyb.49.1.1 — N-terminal domain of alpha and beta subunits of F1 ATP synthase
结构域编号 domain_idd1h8hb3
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.37 — P-loop containing nucleoside triphosphate hydrolases
超家族 Superfamily superfamilyc.37.1 — P-loop containing nucleoside triphosphate hydrolases
家族 Family familyc.37.1.11 — RecA protein-like (ATPase-domain)
结构域编号 domain_idd1h8hc1
类 Class classa — All alpha proteins
折叠类型 Fold folda.69 — Left-handed superhelix
超家族 Superfamily superfamilya.69.1 — C-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases
家族 Family familya.69.1.1 — C-terminal domain of alpha and beta subunits of F1 ATP synthase
结构域编号 domain_idd1h8hc2
类 Class classb — All beta proteins
折叠类型 Fold foldb.49 — Domain of alpha and beta subunits of F1 ATP synthase-like
超家族 Superfamily superfamilyb.49.1 — N-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases
家族 Family familyb.49.1.1 — N-terminal domain of alpha and beta subunits of F1 ATP synthase
结构域编号 domain_idd1h8hc3
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.37 — P-loop containing nucleoside triphosphate hydrolases
超家族 Superfamily superfamilyc.37.1 — P-loop containing nucleoside triphosphate hydrolases
家族 Family familyc.37.1.11 — RecA protein-like (ATPase-domain)
结构域编号 domain_idd1h8hd1
类 Class classa — All alpha proteins
折叠类型 Fold folda.69 — Left-handed superhelix
超家族 Superfamily superfamilya.69.1 — C-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases
家族 Family familya.69.1.1 — C-terminal domain of alpha and beta subunits of F1 ATP synthase
结构域编号 domain_idd1h8hd2
类 Class classb — All beta proteins
折叠类型 Fold foldb.49 — Domain of alpha and beta subunits of F1 ATP synthase-like
超家族 Superfamily superfamilyb.49.1 — N-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases
家族 Family familyb.49.1.1 — N-terminal domain of alpha and beta subunits of F1 ATP synthase
结构域编号 domain_idd1h8hd3
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.37 — P-loop containing nucleoside triphosphate hydrolases
超家族 Superfamily superfamilyc.37.1 — P-loop containing nucleoside triphosphate hydrolases
家族 Family familyc.37.1.11 — RecA protein-like (ATPase-domain)
结构域编号 domain_idd1h8he1
类 Class classa — All alpha proteins
折叠类型 Fold folda.69 — Left-handed superhelix
超家族 Superfamily superfamilya.69.1 — C-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases
家族 Family familya.69.1.1 — C-terminal domain of alpha and beta subunits of F1 ATP synthase
结构域编号 domain_idd1h8he2
类 Class classb — All beta proteins
折叠类型 Fold foldb.49 — Domain of alpha and beta subunits of F1 ATP synthase-like
超家族 Superfamily superfamilyb.49.1 — N-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases
家族 Family familyb.49.1.1 — N-terminal domain of alpha and beta subunits of F1 ATP synthase
结构域编号 domain_idd1h8he3
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.37 — P-loop containing nucleoside triphosphate hydrolases
超家族 Superfamily superfamilyc.37.1 — P-loop containing nucleoside triphosphate hydrolases
家族 Family familyc.37.1.11 — RecA protein-like (ATPase-domain)
结构域编号 domain_idd1h8hf1
类 Class classa — All alpha proteins
折叠类型 Fold folda.69 — Left-handed superhelix
超家族 Superfamily superfamilya.69.1 — C-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases
家族 Family familya.69.1.1 — C-terminal domain of alpha and beta subunits of F1 ATP synthase
结构域编号 domain_idd1h8hf2
类 Class classb — All beta proteins
折叠类型 Fold foldb.49 — Domain of alpha and beta subunits of F1 ATP synthase-like
超家族 Superfamily superfamilyb.49.1 — N-terminal domain of alpha and beta (or A/B) subunits of rotary ATPases
家族 Family familyb.49.1.1 — N-terminal domain of alpha and beta subunits of F1 ATP synthase
结构域编号 domain_idd1h8hf3
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.37 — P-loop containing nucleoside triphosphate hydrolases
超家族 Superfamily superfamilyc.37.1 — P-loop containing nucleoside triphosphate hydrolases
家族 Family familyc.37.1.11 — RecA protein-like (ATPase-domain)
结构域编号 domain_idd1h8hg_
类 Class classc — Alpha and beta proteins (a/b)
折叠类型 Fold foldc.49 — Pyruvate kinase C-terminal domain-like
超家族 Superfamily superfamilyc.49.2 — ATP synthase (F1-ATPase), gamma subunit
家族 Family familyc.49.2.1 — ATP synthase (F1-ATPase), gamma subunit

CATH v4.4 (19 domains)

结构域编号 domain_id1h8hA01
类 Class class2 — Mainly Beta
架构 Architecture architecture40 — Beta Barrel
拓扑 Topology topology30 — Elongation Factor Tu (Ef-tu); domain 3
同源超家族 H-superfamily homologous superfamily20 —
结构域编号 domain_id1h8hA02
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
结构域编号 domain_id1h8hA03
类 Class class1 — Mainly Alpha
架构 Architecture architecture20 — Up-down Bundle
拓扑 Topology topology150 — Lysin
同源超家族 H-superfamily homologous superfamily20 — ATP synthase alpha/beta chain, C-terminal domain
结构域编号 domain_id1h8hB01
类 Class class2 — Mainly Beta
架构 Architecture architecture40 — Beta Barrel
拓扑 Topology topology30 — Elongation Factor Tu (Ef-tu); domain 3
同源超家族 H-superfamily homologous superfamily20 —
结构域编号 domain_id1h8hB02
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
结构域编号 domain_id1h8hB03
类 Class class1 — Mainly Alpha
架构 Architecture architecture20 — Up-down Bundle
拓扑 Topology topology150 — Lysin
同源超家族 H-superfamily homologous superfamily20 — ATP synthase alpha/beta chain, C-terminal domain
结构域编号 domain_id1h8hC01
类 Class class2 — Mainly Beta
架构 Architecture architecture40 — Beta Barrel
拓扑 Topology topology30 — Elongation Factor Tu (Ef-tu); domain 3
同源超家族 H-superfamily homologous superfamily20 —
结构域编号 domain_id1h8hC02
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
结构域编号 domain_id1h8hC03
类 Class class1 — Mainly Alpha
架构 Architecture architecture20 — Up-down Bundle
拓扑 Topology topology150 — Lysin
同源超家族 H-superfamily homologous superfamily20 — ATP synthase alpha/beta chain, C-terminal domain
结构域编号 domain_id1h8hD01
类 Class class2 — Mainly Beta
架构 Architecture architecture40 — Beta Barrel
拓扑 Topology topology10 — Thrombin, subunit H
同源超家族 H-superfamily homologous superfamily170 —
结构域编号 domain_id1h8hD02
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
结构域编号 domain_id1h8hD03
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology1140 — Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3
同源超家族 H-superfamily homologous superfamily10 — Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
结构域编号 domain_id1h8hE01
类 Class class2 — Mainly Beta
架构 Architecture architecture40 — Beta Barrel
拓扑 Topology topology10 — Thrombin, subunit H
同源超家族 H-superfamily homologous superfamily170 —
结构域编号 domain_id1h8hE02
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
结构域编号 domain_id1h8hE03
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology1140 — Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3
同源超家族 H-superfamily homologous superfamily10 — Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
结构域编号 domain_id1h8hF01
类 Class class2 — Mainly Beta
架构 Architecture architecture40 — Beta Barrel
拓扑 Topology topology10 — Thrombin, subunit H
同源超家族 H-superfamily homologous superfamily170 —
结构域编号 domain_id1h8hF02
类 Class class3 — Alpha Beta
架构 Architecture architecture40 — 3-Layer(aba) Sandwich
拓扑 Topology topology50 — Rossmann fold
同源超家族 H-superfamily homologous superfamily300 — P-loop containing nucleotide triphosphate hydrolases
结构域编号 domain_id1h8hF03
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology1140 — Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3
同源超家族 H-superfamily homologous superfamily10 — Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
结构域编号 domain_id1h8hG00
类 Class class1 — Mainly Alpha
架构 Architecture architecture10 — Orthogonal Bundle
拓扑 Topology topology287 — Helix Hairpins
同源超家族 H-superfamily homologous superfamily80 — ATP synthase, gamma subunit, helix hairpin domain
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7. 引用文献 (4)