1hyn

CRYSTAL STRUCTURE OF THE CYTOPLASMIC DOMAIN OF HUMAN ERYTHROCYTE BAND-3 PROTEIN

Method: X-RAY DIFFRACTION Dmax: 110.0 Å Quality: EXCELLENT

1. Protein Identity and Related Structures Protein Identity & Related Structures

BAND 3 ANION TRANSPORT PROTEIN

Homo sapiens

UniProt P02730

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein homooligomer Homooligomer Protein × 2 PDB declaration: dimeric(2) Consistent with protein copy count Chain P; UniProt 1–379 Chain Q; UniProt 1–379 Not recorded No other associated polymer X-RAY DIFFRACTION X-ray crystallization conditions:pH 4.8;METHOD: SITTING DROP VAPOR DIFFUSION WITH SEEDING. TEMPERATURE: 293 K. RESERVOIR: 50-53% SATURATED AMMONIUM SULFATE, 150mM SODIUM CITRATE PH 4.8. PROTEIN: 7 mg/ml PROTEIN IN 5mM SODIUM PHOSPHATE PH 6.8, 10 mM SODIUM CHLORIDE. Resolution 2.60 Å R-free 0.290
2 Protein homooligomer Homooligomer Protein × 2 PDB declaration: dimeric(2) Consistent with protein copy count Chain R; UniProt 1–379 Chain S; UniProt 1–379 Not recorded No other associated polymer X-RAY DIFFRACTION X-ray crystallization conditions:pH 4.8;METHOD: SITTING DROP VAPOR DIFFUSION WITH SEEDING. TEMPERATURE: 293 K. RESERVOIR: 50-53% SATURATED AMMONIUM SULFATE, 150mM SODIUM CITRATE PH 4.8. PROTEIN: 7 mg/ml PROTEIN IN 5mM SODIUM PHOSPHATE PH 6.8, 10 mM SODIUM CHLORIDE. Resolution 2.60 Å R-free 0.290
3 Protein homooligomer Homooligomer Protein × 8 PDB declaration: octameric(8) Consistent with protein copy count Chain P; UniProt 1–379 Chain Q; UniProt 1–379 Chain R; UniProt 1–379 Chain S; UniProt 1–379 Not recorded No other associated polymer X-RAY DIFFRACTION X-ray crystallization conditions:pH 4.8;METHOD: SITTING DROP VAPOR DIFFUSION WITH SEEDING. TEMPERATURE: 293 K. RESERVOIR: 50-53% SATURATED AMMONIUM SULFATE, 150mM SODIUM CITRATE PH 4.8. PROTEIN: 7 mg/ml PROTEIN IN 5mM SODIUM PHOSPHATE PH 6.8, 10 mM SODIUM CHLORIDE. Resolution 2.60 Å R-free 0.290

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

53 other PDB entries and 54 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name B3AT_HUMAN
Isoform
PDB entities 1
Chains and sequence ranges Author chain P; PDBConstruct 1–379; UniProt 1–379 Author chain Q; PDBConstruct 1–379; UniProt 1–379 Author chain R; PDBConstruct 1–379; UniProt 1–379 Author chain S; PDBConstruct 1–379; UniProt 1–379

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 1hyn

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 1hyn
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2. Structure Basics 2. Structure Basics

Entry ID entry_id1hyn
Deposition date deposition_date2001-01-20
Structure title titleCRYSTAL STRUCTURE OF THE CYTOPLASMIC DOMAIN OF HUMAN ERYTHROCYTE BAND-3 PROTEIN
Keywords keywordsMEMBRANE PROTEIN; MEMBRANE PROTEIN
Experimental Method methodX-RAY DIFFRACTION

3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier35.80
Radius of gyration Rg (electron density) rg_electron34.63
Forward intensity I(0) i0264995000.00
Molecular weight molecular_weight132960.0 kDa
Excluded volume excluded_volume167130 ų
Envelope volume envelope_volume212540 ų
Hydration-shell volume shell_volume49617 ų
Envelope diameter envelope_diameter112.7
Shell Rg shell_rg42.75
Envelope Rg envelope_rg34.10
Shape Rg shape_rg34.62
Total Rg total_rg35.23
Total atoms total_atoms9384
Residues n_residues1188
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 −1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3

4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax110.0
Rg (real space) rg_real35.66
Rg uncertainty (real space) rg_real_error0.81
I(0) (real space) i0_real2.6500e+08
I(0) uncertainty (real space) i0_real_error4.7730e+06
Rg (reciprocal space) rg_reciprocal35.75
I(0) (reciprocal space) i0_reciprocal265000000.0000
Solution quality estimate total_estimate0.9048
Solution quality rating solution_quality EXCELLENT a EXCELLENT solution
P(r) peaks n_peaks1
Primary peak position r_peak_primary47.5
Skewness Skewness skewness0.136
Kurtosis Kurtosis kurtosis-0.642
Angular range angular_range— – 0.2200 −1
Current regularization parameter α current_alpha0.0000
Highest regularization parameter α highest_alpha124700000.0000
Real-space data points n_real_points45
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.000; Oscil: 0.963; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.999; Smooth: 0.870

5. Crystallography and Experiment 5. Crystallography & Experiment

6. Entities and Polymers Entities & Polymers (2)

7. Fold Classification (SCOP + CATH) 8 domains

SCOP 2.08 (4 domains)

Domain ID domain_idd1hynp_
Class classd — Alpha and beta proteins (a+b)
Fold Fold foldd.112 — Phoshotransferase/anion transport protein
Superfamily Superfamily superfamilyd.112.1 — Phoshotransferase/anion transport protein
Family Family familyd.112.1.2 — Anion transport protein, cytoplasmic domain
Domain ID domain_idd1hynq_
Class classd — Alpha and beta proteins (a+b)
Fold Fold foldd.112 — Phoshotransferase/anion transport protein
Superfamily Superfamily superfamilyd.112.1 — Phoshotransferase/anion transport protein
Family Family familyd.112.1.2 — Anion transport protein, cytoplasmic domain
Domain ID domain_idd1hynr_
Class classd — Alpha and beta proteins (a+b)
Fold Fold foldd.112 — Phoshotransferase/anion transport protein
Superfamily Superfamily superfamilyd.112.1 — Phoshotransferase/anion transport protein
Family Family familyd.112.1.2 — Anion transport protein, cytoplasmic domain
Domain ID domain_idd1hyns_
Class classd — Alpha and beta proteins (a+b)
Fold Fold foldd.112 — Phoshotransferase/anion transport protein
Superfamily Superfamily superfamilyd.112.1 — Phoshotransferase/anion transport protein
Family Family familyd.112.1.2 — Anion transport protein, cytoplasmic domain

CATH v4.4 (4 domains)

Domain ID domain_id1hynP00
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology930 — Mannitol-specific EII; Chain A
Homologous superfamily homologous superfamily10 — Mannitol-specific EII; Chain A
Domain ID domain_id1hynQ00
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology930 — Mannitol-specific EII; Chain A
Homologous superfamily homologous superfamily10 — Mannitol-specific EII; Chain A
Domain ID domain_id1hynR00
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology930 — Mannitol-specific EII; Chain A
Homologous superfamily homologous superfamily10 — Mannitol-specific EII; Chain A
Domain ID domain_id1hynS00
Class class3 — Alpha Beta
Architecture architecture40 — 3-Layer(aba) Sandwich
Topology topology930 — Mannitol-specific EII; Chain A
Homologous superfamily homologous superfamily10 — Mannitol-specific EII; Chain A

8. Citations (2)

9. Files and Curves (10)