1tzo

Crystal Structure of the Anthrax Toxin Protective Antigen Heptameric Prepore

Method: X-RAY DIFFRACTION
▼

1. Protein Identity and Related Structures Protein Identity & Related Structures

Protective antigen

Bacillus anthracis str.

UniProt P13423

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein homooligomer Homooligomer Protein 7 CALCIUM ION × 14 Consistent with protein count
2 Protein homooligomer Homooligomer Protein 7 CALCIUM ION × 14 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PAG_BACAN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–562; UniProt 203–764 Author chain B; PDBConstruct 1–562; UniProt 203–764 Author chain C; PDBConstruct 1–562; UniProt 203–764 Author chain D; PDBConstruct 1–562; UniProt 203–764 Author chain E; PDBConstruct 1–562; UniProt 203–764 Author chain F; PDBConstruct 1–562; UniProt 203–764 Author chain G; PDBConstruct 1–562; UniProt 203–764 Author chain H; PDBConstruct 1–562; UniProt 203–764 Author chain I; PDBConstruct 1–562; UniProt 203–764 Author chain J; PDBConstruct 1–562; UniProt 203–764 Author chain K; PDBConstruct 1–562; UniProt 203–764 Author chain L; PDBConstruct 1–562; UniProt 203–764 Author chain M; PDBConstruct 1–562; UniProt 203–764 Author chain O; PDBConstruct 1–562; UniProt 203–764

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

▼

2. Structure Basics 2. Structure Basics

Entry ID entry_id1tzo
Deposition date deposition_date2004-07-10
Structure title titleCrystal Structure of the Anthrax Toxin Protective Antigen Heptameric Prepore
Keywords keywordsheptamer, TOXIN; TOXIN
Experimental Method methodX-RAY DIFFRACTION
▼

3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

1tzo__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

1tzo__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

1tzo__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)52.72 Å
Rg (electron density)52.52 Å
Total Rg52.78 Å
Atom count30569
Residues3871
Excluded volume541060 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 1tzo__assembly_1__model_1 heptameric (7) Success 4.1.3-1-20251215 (887e7ef) View Download
2 1 1tzo__assembly_2__model_1 heptameric (7) Success 4.1.3-1-20251215 (887e7ef) View Download
▶

4. Crystallography and Experiment 4. Crystallography & Experiment

▶

5. Entities and Polymers Entities & Polymers (2)

▼

6. Fold Classification (SCOP + CATH) 70 domains

SCOP 2.08 (28 domains)

Domain ID domain_idd1tzoa1
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.60 — Anthrax protective antigen C-terminal-like
Superfamily Superfamily superfamilyf.60.1 — Anthrax protective antigen C-terminal-like
Family Family familyf.60.1.1 — Anthrax protective antigen C-terminal-like
Domain ID domain_idd1tzoa2
Class classb — All beta proteins
Fold Fold foldb.179 — Anthrax protective antigen N-terminal-like
Superfamily Superfamily superfamilyb.179.1 — PA14-like
Family Family familyb.179.1.1 — PA14
Domain ID domain_idd1tzob1
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.60 — Anthrax protective antigen C-terminal-like
Superfamily Superfamily superfamilyf.60.1 — Anthrax protective antigen C-terminal-like
Family Family familyf.60.1.1 — Anthrax protective antigen C-terminal-like
Domain ID domain_idd1tzob2
Class classb — All beta proteins
Fold Fold foldb.179 — Anthrax protective antigen N-terminal-like
Superfamily Superfamily superfamilyb.179.1 — PA14-like
Family Family familyb.179.1.1 — PA14
Domain ID domain_idd1tzoc1
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.60 — Anthrax protective antigen C-terminal-like
Superfamily Superfamily superfamilyf.60.1 — Anthrax protective antigen C-terminal-like
Family Family familyf.60.1.1 — Anthrax protective antigen C-terminal-like
Domain ID domain_idd1tzoc2
Class classb — All beta proteins
Fold Fold foldb.179 — Anthrax protective antigen N-terminal-like
Superfamily Superfamily superfamilyb.179.1 — PA14-like
Family Family familyb.179.1.1 — PA14
Domain ID domain_idd1tzod1
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.60 — Anthrax protective antigen C-terminal-like
Superfamily Superfamily superfamilyf.60.1 — Anthrax protective antigen C-terminal-like
Family Family familyf.60.1.1 — Anthrax protective antigen C-terminal-like
Domain ID domain_idd1tzod2
Class classb — All beta proteins
Fold Fold foldb.179 — Anthrax protective antigen N-terminal-like
Superfamily Superfamily superfamilyb.179.1 — PA14-like
Family Family familyb.179.1.1 — PA14
Domain ID domain_idd1tzoe1
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.60 — Anthrax protective antigen C-terminal-like
Superfamily Superfamily superfamilyf.60.1 — Anthrax protective antigen C-terminal-like
Family Family familyf.60.1.1 — Anthrax protective antigen C-terminal-like
Domain ID domain_idd1tzoe2
Class classb — All beta proteins
Fold Fold foldb.179 — Anthrax protective antigen N-terminal-like
Superfamily Superfamily superfamilyb.179.1 — PA14-like
Family Family familyb.179.1.1 — PA14
Domain ID domain_idd1tzof1
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.60 — Anthrax protective antigen C-terminal-like
Superfamily Superfamily superfamilyf.60.1 — Anthrax protective antigen C-terminal-like
Family Family familyf.60.1.1 — Anthrax protective antigen C-terminal-like
Domain ID domain_idd1tzof2
Class classb — All beta proteins
Fold Fold foldb.179 — Anthrax protective antigen N-terminal-like
Superfamily Superfamily superfamilyb.179.1 — PA14-like
Family Family familyb.179.1.1 — PA14
Domain ID domain_idd1tzog1
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.60 — Anthrax protective antigen C-terminal-like
Superfamily Superfamily superfamilyf.60.1 — Anthrax protective antigen C-terminal-like
Family Family familyf.60.1.1 — Anthrax protective antigen C-terminal-like
Domain ID domain_idd1tzog2
Class classb — All beta proteins
Fold Fold foldb.179 — Anthrax protective antigen N-terminal-like
Superfamily Superfamily superfamilyb.179.1 — PA14-like
Family Family familyb.179.1.1 — PA14
Domain ID domain_idd1tzoh1
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.60 — Anthrax protective antigen C-terminal-like
Superfamily Superfamily superfamilyf.60.1 — Anthrax protective antigen C-terminal-like
Family Family familyf.60.1.1 — Anthrax protective antigen C-terminal-like
Domain ID domain_idd1tzoh2
Class classb — All beta proteins
Fold Fold foldb.179 — Anthrax protective antigen N-terminal-like
Superfamily Superfamily superfamilyb.179.1 — PA14-like
Family Family familyb.179.1.1 — PA14
Domain ID domain_idd1tzoi1
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.60 — Anthrax protective antigen C-terminal-like
Superfamily Superfamily superfamilyf.60.1 — Anthrax protective antigen C-terminal-like
Family Family familyf.60.1.1 — Anthrax protective antigen C-terminal-like
Domain ID domain_idd1tzoi2
Class classb — All beta proteins
Fold Fold foldb.179 — Anthrax protective antigen N-terminal-like
Superfamily Superfamily superfamilyb.179.1 — PA14-like
Family Family familyb.179.1.1 — PA14
Domain ID domain_idd1tzoj1
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.60 — Anthrax protective antigen C-terminal-like
Superfamily Superfamily superfamilyf.60.1 — Anthrax protective antigen C-terminal-like
Family Family familyf.60.1.1 — Anthrax protective antigen C-terminal-like
Domain ID domain_idd1tzoj2
Class classb — All beta proteins
Fold Fold foldb.179 — Anthrax protective antigen N-terminal-like
Superfamily Superfamily superfamilyb.179.1 — PA14-like
Family Family familyb.179.1.1 — PA14
Domain ID domain_idd1tzok1
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.60 — Anthrax protective antigen C-terminal-like
Superfamily Superfamily superfamilyf.60.1 — Anthrax protective antigen C-terminal-like
Family Family familyf.60.1.1 — Anthrax protective antigen C-terminal-like
Domain ID domain_idd1tzok2
Class classb — All beta proteins
Fold Fold foldb.179 — Anthrax protective antigen N-terminal-like
Superfamily Superfamily superfamilyb.179.1 — PA14-like
Family Family familyb.179.1.1 — PA14
Domain ID domain_idd1tzol1
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.60 — Anthrax protective antigen C-terminal-like
Superfamily Superfamily superfamilyf.60.1 — Anthrax protective antigen C-terminal-like
Family Family familyf.60.1.1 — Anthrax protective antigen C-terminal-like
Domain ID domain_idd1tzol2
Class classb — All beta proteins
Fold Fold foldb.179 — Anthrax protective antigen N-terminal-like
Superfamily Superfamily superfamilyb.179.1 — PA14-like
Family Family familyb.179.1.1 — PA14
Domain ID domain_idd1tzom1
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.60 — Anthrax protective antigen C-terminal-like
Superfamily Superfamily superfamilyf.60.1 — Anthrax protective antigen C-terminal-like
Family Family familyf.60.1.1 — Anthrax protective antigen C-terminal-like
Domain ID domain_idd1tzom2
Class classb — All beta proteins
Fold Fold foldb.179 — Anthrax protective antigen N-terminal-like
Superfamily Superfamily superfamilyb.179.1 — PA14-like
Family Family familyb.179.1.1 — PA14
Domain ID domain_idd1tzoo1
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.60 — Anthrax protective antigen C-terminal-like
Superfamily Superfamily superfamilyf.60.1 — Anthrax protective antigen C-terminal-like
Family Family familyf.60.1.1 — Anthrax protective antigen C-terminal-like
Domain ID domain_idd1tzoo2
Class classb — All beta proteins
Fold Fold foldb.179 — Anthrax protective antigen N-terminal-like
Superfamily Superfamily superfamilyb.179.1 — PA14-like
Family Family familyb.179.1.1 — PA14

CATH v4.4 (42 domains)

Domain ID domain_id1tzoA02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily240 — Protective antigen, heptamerisation domain
Domain ID domain_id1tzoA03
Class class3 — Alpha Beta
Architecture architecture10 — Roll
Topology topology20 — Ubiquitin-like (UB roll)
Homologous superfamily homologous superfamily110 —
Domain ID domain_id1tzoA04
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily810 —
Domain ID domain_id1tzoB02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily240 — Protective antigen, heptamerisation domain
Domain ID domain_id1tzoB03
Class class3 — Alpha Beta
Architecture architecture10 — Roll
Topology topology20 — Ubiquitin-like (UB roll)
Homologous superfamily homologous superfamily110 —
Domain ID domain_id1tzoB04
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily810 —
Domain ID domain_id1tzoC02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily240 — Protective antigen, heptamerisation domain
Domain ID domain_id1tzoC03
Class class3 — Alpha Beta
Architecture architecture10 — Roll
Topology topology20 — Ubiquitin-like (UB roll)
Homologous superfamily homologous superfamily110 —
Domain ID domain_id1tzoC04
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily810 —
Domain ID domain_id1tzoD02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily240 — Protective antigen, heptamerisation domain
Domain ID domain_id1tzoD03
Class class3 — Alpha Beta
Architecture architecture10 — Roll
Topology topology20 — Ubiquitin-like (UB roll)
Homologous superfamily homologous superfamily110 —
Domain ID domain_id1tzoD04
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily810 —
Domain ID domain_id1tzoE02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily240 — Protective antigen, heptamerisation domain
Domain ID domain_id1tzoE03
Class class3 — Alpha Beta
Architecture architecture10 — Roll
Topology topology20 — Ubiquitin-like (UB roll)
Homologous superfamily homologous superfamily110 —
Domain ID domain_id1tzoE04
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily810 —
Domain ID domain_id1tzoF02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily240 — Protective antigen, heptamerisation domain
Domain ID domain_id1tzoF03
Class class3 — Alpha Beta
Architecture architecture10 — Roll
Topology topology20 — Ubiquitin-like (UB roll)
Homologous superfamily homologous superfamily110 —
Domain ID domain_id1tzoF04
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily810 —
Domain ID domain_id1tzoG02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily240 — Protective antigen, heptamerisation domain
Domain ID domain_id1tzoG03
Class class3 — Alpha Beta
Architecture architecture10 — Roll
Topology topology20 — Ubiquitin-like (UB roll)
Homologous superfamily homologous superfamily110 —
Domain ID domain_id1tzoG04
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily810 —
Domain ID domain_id1tzoH02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily240 — Protective antigen, heptamerisation domain
Domain ID domain_id1tzoH03
Class class3 — Alpha Beta
Architecture architecture10 — Roll
Topology topology20 — Ubiquitin-like (UB roll)
Homologous superfamily homologous superfamily110 —
Domain ID domain_id1tzoH04
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily810 —
Domain ID domain_id1tzoI02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily240 — Protective antigen, heptamerisation domain
Domain ID domain_id1tzoI03
Class class3 — Alpha Beta
Architecture architecture10 — Roll
Topology topology20 — Ubiquitin-like (UB roll)
Homologous superfamily homologous superfamily110 —
Domain ID domain_id1tzoI04
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily810 —
Domain ID domain_id1tzoJ02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily240 — Protective antigen, heptamerisation domain
Domain ID domain_id1tzoJ03
Class class3 — Alpha Beta
Architecture architecture10 — Roll
Topology topology20 — Ubiquitin-like (UB roll)
Homologous superfamily homologous superfamily110 —
Domain ID domain_id1tzoJ04
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily810 —
Domain ID domain_id1tzoK02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily240 — Protective antigen, heptamerisation domain
Domain ID domain_id1tzoK03
Class class3 — Alpha Beta
Architecture architecture10 — Roll
Topology topology20 — Ubiquitin-like (UB roll)
Homologous superfamily homologous superfamily110 —
Domain ID domain_id1tzoK04
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily810 —
Domain ID domain_id1tzoL02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily240 — Protective antigen, heptamerisation domain
Domain ID domain_id1tzoL03
Class class3 — Alpha Beta
Architecture architecture10 — Roll
Topology topology20 — Ubiquitin-like (UB roll)
Homologous superfamily homologous superfamily110 —
Domain ID domain_id1tzoL04
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily810 —
Domain ID domain_id1tzoM02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily240 — Protective antigen, heptamerisation domain
Domain ID domain_id1tzoM03
Class class3 — Alpha Beta
Architecture architecture10 — Roll
Topology topology20 — Ubiquitin-like (UB roll)
Homologous superfamily homologous superfamily110 —
Domain ID domain_id1tzoM04
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily810 —
Domain ID domain_id1tzoO02
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily240 — Protective antigen, heptamerisation domain
Domain ID domain_id1tzoO03
Class class3 — Alpha Beta
Architecture architecture10 — Roll
Topology topology20 — Ubiquitin-like (UB roll)
Homologous superfamily homologous superfamily110 —
Domain ID domain_id1tzoO04
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily810 —
▶

7. Citations (1)