5w1k

JUNV GP1 CR1-10 Fab CR1-28 Fab complex

Method: X-RAY DIFFRACTION
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1. 蛋白身份与相关结构 Protein Identity & Related Structures

CR1-28 Fab light chain

Homo sapiens

UniProt P0DOX7

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 5 其他聚合物 1 CR1-28 Fab heavy chain × 1 (S6C4R2) CR1-10 Fab light chain × 1 (Q6PIL8) CR1-10 Fab heavy chain × 1 (S6B2B6) Pre-glycoprotein polyprotein GP complex × 1 (P26313) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 与蛋白数一致
2 其他组合 异源复合物 蛋白 5 其他聚合物 1 CR1-28 Fab heavy chain × 1 (S6C4R2) CR1-10 Fab light chain × 1 (Q6PIL8) CR1-10 Fab heavy chain × 1 (S6B2B6) Pre-glycoprotein polyprotein GP complex × 1 (P26313) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 与蛋白数一致
3 其他组合 异源复合物 蛋白 5 其他聚合物 1 CR1-28 Fab heavy chain × 1 (S6C4R2) CR1-10 Fab light chain × 1 (Q6PIL8) CR1-10 Fab heavy chain × 1 (S6B2B6) Pre-glycoprotein polyprotein GP complex × 1 (P26313) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 与蛋白数一致
4 其他组合 异源复合物 蛋白 5 其他聚合物 1 CR1-28 Fab heavy chain × 1 (S6C4R2) CR1-10 Fab light chain × 1 (Q6PIL8) CR1-10 Fab heavy chain × 1 (S6B2B6) Pre-glycoprotein polyprotein GP complex × 1 (P26313) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 IGK_HUMAN
Isoform —
PDB实体 1
链与序列区间 作者链 A; PDB构建体 103–206; UniProt 109–212 作者链 F; PDB构建体 103–206; UniProt 109–212 作者链 K; PDB构建体 103–206; UniProt 109–212 作者链 S; PDB构建体 103–206; UniProt 109–212

CR1-28 Fab heavy chain

Homo sapiens

UniProt S6C4R2

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 5 其他聚合物 1 CR1-28 Fab light chain × 1 (P0DOX7) CR1-10 Fab light chain × 1 (Q6PIL8) CR1-10 Fab heavy chain × 1 (S6B2B6) Pre-glycoprotein polyprotein GP complex × 1 (P26313) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 与蛋白数一致
2 其他组合 异源复合物 蛋白 5 其他聚合物 1 CR1-28 Fab light chain × 1 (P0DOX7) CR1-10 Fab light chain × 1 (Q6PIL8) CR1-10 Fab heavy chain × 1 (S6B2B6) Pre-glycoprotein polyprotein GP complex × 1 (P26313) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 与蛋白数一致
3 其他组合 异源复合物 蛋白 5 其他聚合物 1 CR1-28 Fab light chain × 1 (P0DOX7) CR1-10 Fab light chain × 1 (Q6PIL8) CR1-10 Fab heavy chain × 1 (S6B2B6) Pre-glycoprotein polyprotein GP complex × 1 (P26313) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 与蛋白数一致
4 其他组合 异源复合物 蛋白 5 其他聚合物 1 CR1-28 Fab light chain × 1 (P0DOX7) CR1-10 Fab light chain × 1 (Q6PIL8) CR1-10 Fab heavy chain × 1 (S6B2B6) Pre-glycoprotein polyprotein GP complex × 1 (P26313) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 S6C4R2_HUMAN
Isoform —
PDB实体 2
链与序列区间 作者链 B; PDB构建体 127–226; UniProt 142–241 作者链 G; PDB构建体 127–226; UniProt 142–241 作者链 L; PDB构建体 127–226; UniProt 142–241 作者链 T; PDB构建体 127–226; UniProt 142–241

CR1-10 Fab light chain

Homo sapiens

UniProt Q6PIL8

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 5 其他聚合物 1 CR1-28 Fab light chain × 1 (P0DOX7) CR1-28 Fab heavy chain × 1 (S6C4R2) CR1-10 Fab heavy chain × 1 (S6B2B6) Pre-glycoprotein polyprotein GP complex × 1 (P26313) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 与蛋白数一致
2 其他组合 异源复合物 蛋白 5 其他聚合物 1 CR1-28 Fab light chain × 1 (P0DOX7) CR1-28 Fab heavy chain × 1 (S6C4R2) CR1-10 Fab heavy chain × 1 (S6B2B6) Pre-glycoprotein polyprotein GP complex × 1 (P26313) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 与蛋白数一致
3 其他组合 异源复合物 蛋白 5 其他聚合物 1 CR1-28 Fab light chain × 1 (P0DOX7) CR1-28 Fab heavy chain × 1 (S6C4R2) CR1-10 Fab heavy chain × 1 (S6B2B6) Pre-glycoprotein polyprotein GP complex × 1 (P26313) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 与蛋白数一致
4 其他组合 异源复合物 蛋白 5 其他聚合物 1 CR1-28 Fab light chain × 1 (P0DOX7) CR1-28 Fab heavy chain × 1 (S6C4R2) CR1-10 Fab heavy chain × 1 (S6B2B6) Pre-glycoprotein polyprotein GP complex × 1 (P26313) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 Q6PIL8_HUMAN
Isoform —
PDB实体 3
链与序列区间 作者链 C; PDB构建体 106–213; UniProt 128–235 作者链 H; PDB构建体 106–213; UniProt 128–235 作者链 M; PDB构建体 106–213; UniProt 128–235 作者链 N; PDB构建体 106–213; UniProt 128–235

CR1-10 Fab heavy chain

Homo sapiens

UniProt S6B2B6

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 5 其他聚合物 1 CR1-28 Fab light chain × 1 (P0DOX7) CR1-28 Fab heavy chain × 1 (S6C4R2) CR1-10 Fab light chain × 1 (Q6PIL8) Pre-glycoprotein polyprotein GP complex × 1 (P26313) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 与蛋白数一致
2 其他组合 异源复合物 蛋白 5 其他聚合物 1 CR1-28 Fab light chain × 1 (P0DOX7) CR1-28 Fab heavy chain × 1 (S6C4R2) CR1-10 Fab light chain × 1 (Q6PIL8) Pre-glycoprotein polyprotein GP complex × 1 (P26313) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 与蛋白数一致
3 其他组合 异源复合物 蛋白 5 其他聚合物 1 CR1-28 Fab light chain × 1 (P0DOX7) CR1-28 Fab heavy chain × 1 (S6C4R2) CR1-10 Fab light chain × 1 (Q6PIL8) Pre-glycoprotein polyprotein GP complex × 1 (P26313) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 与蛋白数一致
4 其他组合 异源复合物 蛋白 5 其他聚合物 1 CR1-28 Fab light chain × 1 (P0DOX7) CR1-28 Fab heavy chain × 1 (S6C4R2) CR1-10 Fab light chain × 1 (Q6PIL8) Pre-glycoprotein polyprotein GP complex × 1 (P26313) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 S6B2B6_HUMAN
Isoform —
PDB实体 4
链与序列区间 作者链 D; PDB构建体 126–225; UniProt 146–245 作者链 I; PDB构建体 126–225; UniProt 146–245 作者链 O; PDB构建体 126–225; UniProt 146–245 作者链 Q; PDB构建体 126–225; UniProt 146–245

Pre-glycoprotein polyprotein GP complex

Junin mammarenavirus

UniProt P26313

当前结构中的状态

Assembly 物理组成 蛋白状态 分子拷贝数 共同组分 数据核对
1 其他组合 异源复合物 蛋白 5 其他聚合物 1 CR1-28 Fab light chain × 1 (P0DOX7) CR1-28 Fab heavy chain × 1 (S6C4R2) CR1-10 Fab light chain × 1 (Q6PIL8) CR1-10 Fab heavy chain × 1 (S6B2B6) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 2-acetamido-2-deoxy-beta-D-glucopyranose × 1 与蛋白数一致
2 其他组合 异源复合物 蛋白 5 其他聚合物 1 CR1-28 Fab light chain × 1 (P0DOX7) CR1-28 Fab heavy chain × 1 (S6C4R2) CR1-10 Fab light chain × 1 (Q6PIL8) CR1-10 Fab heavy chain × 1 (S6B2B6) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 与蛋白数一致
3 其他组合 异源复合物 蛋白 5 其他聚合物 1 CR1-28 Fab light chain × 1 (P0DOX7) CR1-28 Fab heavy chain × 1 (S6C4R2) CR1-10 Fab light chain × 1 (Q6PIL8) CR1-10 Fab heavy chain × 1 (S6B2B6) 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 与蛋白数一致
4 其他组合 异源复合物 蛋白 5 其他聚合物 1 CR1-28 Fab light chain × 1 (P0DOX7) CR1-28 Fab heavy chain × 1 (S6C4R2) CR1-10 Fab light chain × 1 (Q6PIL8) CR1-10 Fab heavy chain × 1 (S6B2B6) beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose × 1 与蛋白数一致

数据库中的同蛋白其他状态

查看构建体与数据证据
UniProt名称 GLYC_JUNIN
Isoform —
PDB实体 5
链与序列区间 作者链 E; PDB构建体 1–142; UniProt 87–228 作者链 J; PDB构建体 1–142; UniProt 87–228 作者链 P; PDB构建体 1–142; UniProt 87–228 作者链 R; PDB构建体 1–142; UniProt 87–228

页面优先展示蛋白身份、当前 assembly、共同组分、聚集状态和跨 PDB 结构链接。 链映射与序列区间收在“数据证据”中;数据库内部编号、导入时间和 assembly 操作表达式仅用于维护,因此不在读者页面展示。

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2. 结构基本信息 2. Structure Basics

条目编号 entry_id5w1k
沉积日期 deposition_date2017-06-03
结构标题 titleJUNV GP1 CR1-10 Fab CR1-28 Fab complex
关键词 keywordsFab, antibody, Junin virus, arenavirus, viral protein, VIRAL PROTEIN-IMMUNE SYSTEM complex; VIRAL PROTEIN/IMMUNE SYSTEM
实验方法 methodX-RAY DIFFRACTION
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3. Official assembly/model 理论 SAXS Official SAXS Profiles

页面只读取最新 assembly 计算结果。每一条曲线都对应明确的 PDB、official biological assembly 和 coordinate model。

5w1k__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

下载该曲线 .dat

5w1k__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 个绘图点;横轴和纵轴均采用对数尺度。

5w1k__assembly_1__model_1 | P(r) · Pending

新版 assembly/model P(r) 尚未计算 此处仅保留位置,不展示旧数据 r (Angstrom) P(r)
P(r) 将按相同 assembly/model 分别计算和展示。
Rg(Guinier)42.49 Å
Rg(电子密度)43.00 Å
总 Rg43.21 Å
原子数7788
残基数1010
排除体积137790 ų
最大 q0.500 Å⁻¹
Assembly Model 结构单元 聚集说明 状态 CRYSOL 操作
1 1 5w1k__assembly_1__model_1 pentameric (5) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
2 1 5w1k__assembly_2__model_1 pentameric (5) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
3 1 5w1k__assembly_3__model_1 pentameric (5) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
4 1 5w1k__assembly_4__model_1 pentameric (5) 成功 4.1.3-1-20251215 (887e7ef) 查看 下载
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4. 晶体学与实验 4. Crystallography & Experiment

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5. 实体与聚合物信息 Entities & Polymers (8)

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6. 折叠分类 (SCOP + CATH) 24 domains

CATH v4.4 (24 domains)

结构域编号 domain_id5w1kA01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5w1kA02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5w1kB02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5w1kC01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5w1kC02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5w1kD02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5w1kF01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5w1kF02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5w1kG02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5w1kH01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5w1kH02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5w1kI02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5w1kK01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5w1kK02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5w1kL02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5w1kM01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5w1kM02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5w1kN01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5w1kN02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5w1kO02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5w1kQ02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5w1kS01
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5w1kS02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
结构域编号 domain_id5w1kT02
类 Class class2 — Mainly Beta
架构 Architecture architecture60 — Sandwich
拓扑 Topology topology40 — Immunoglobulin-like
同源超家族 H-superfamily homologous superfamily10 — Immunoglobulins
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7. 引用文献 (1)