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6wcj

Asymmetric vertex of the clathrin minicoat cage

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Clathrin heavy chain 1

OrganismNot specified

UniProt P49951

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 15 Clathrin light chain B × 6 （P04975） Consistent with protein count

Other States of the Same Protein in the Database

Monomer
1b89 3gd1

2 assemblies

Homodimer

None

Homotetramer

None

Other homooligomers
3qil 3qil 3qil 3qil 3qil 3qil 3qil 3qil

8 assemblies

Heteromeric or nucleic-acid complex
1utc 1utc 1xi4 1xi4 1xi4 1xi5 1xi5 1xi5 3gc3 3iyv 3iyv 3iyv

27 assemblies; showing the first 12

View Construct and Data Evidence
UniProt name CLH1_BOVIN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 1–1675； UniProt 1–1675 Author chain C； PDBConstruct 1–1675； UniProt 1–1675 Author chain D； PDBConstruct 1–1675； UniProt 1–1675 Author chain G； PDBConstruct 1–1675； UniProt 1–1675 Author chain H； PDBConstruct 1–1675； UniProt 1–1675 Author chain I； PDBConstruct 1–1675； UniProt 1–1675 Author chain K； PDBConstruct 1–1675； UniProt 1–1675 Author chain L； PDBConstruct 1–1675； UniProt 1–1675 Author chain M； PDBConstruct 1–1675； UniProt 1–1675

Clathrin light chain B

OrganismNot specified

UniProt P04975

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 15 Clathrin heavy chain 1 × 9 （P49951） Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
3lvg 3lvh 6wcj

3 assemblies

View Construct and Data Evidence
UniProt name CLCB_BOVIN
Isoform —
PDB entities 2
Chains and sequence ranges Author chain B； PDBConstruct 1–228； UniProt 1–228 Author chain E； PDBConstruct 1–228； UniProt 1–228 Author chain F； PDBConstruct 1–228； UniProt 1–228 Author chain J； PDBConstruct 1–228； UniProt 1–228 Author chain N； PDBConstruct 1–228； UniProt 1–228 Author chain O； PDBConstruct 1–228； UniProt 1–228

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id6wcj
Deposition date deposition_date2020-03-30
Structure title titleAsymmetric vertex of the clathrin minicoat cage
Keywords keywordsClathrin coated vesicle, clathrin heavy chain, clathrin light chain, clathrin cage, ENDOCYTOSIS; ENDOCYTOSIS
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

6wcj__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

6wcj__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

6wcj__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）82.08 Å
Rg (electron density)82.74 Å
Total Rg82.38 Å
Atom count41184
Residues5007
Excluded volume733760 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 6wcj__assembly_1__model_1 pentadecameric （15） Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (2)

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7. Citations (1)