← Back to search
7jfo

EPYC1(49-72)-bound Rubisco

Method: ELECTRON MICROSCOPY
▼

1. Protein Identity and Related Structures Protein Identity & Related Structures

Ribulose bisphosphate carboxylase large chain

OrganismNot specified

UniProt P00877

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 24 Ribulose bisphosphate carboxylase small chain 2, chloroplastic × 8 （P08475） LCI5 × 8 （Q94ET8） water × 16 Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
1gk8 1ir2 1ir2 1uw9 1uwa 1uzh 2v63 2v67 2v68 2v69 2v6a 2vdh

16 assemblies; showing the first 12

View Construct and Data Evidence
UniProt name RBL_CHLRE
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 1–475； UniProt 1–475 Author chain C； PDBConstruct 1–475； UniProt 1–475 Author chain E； PDBConstruct 1–475； UniProt 1–475 Author chain G； PDBConstruct 1–475； UniProt 1–475 Author chain I； PDBConstruct 1–475； UniProt 1–475 Author chain K； PDBConstruct 1–475； UniProt 1–475 Author chain M； PDBConstruct 1–475； UniProt 1–475 Author chain O； PDBConstruct 1–475； UniProt 1–475

Ribulose bisphosphate carboxylase small chain 2, chloroplastic

OrganismNot specified

UniProt P08475

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 24 Ribulose bisphosphate carboxylase large chain × 8 （P00877） LCI5 × 8 （Q94ET8） water × 16 Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
1ir2 1ir2 7jfo 7jn4 7jsx

5 assemblies

View Construct and Data Evidence
UniProt name RBS2_CHLRE
Isoform —
PDB entities 2
Chains and sequence ranges Author chain B； PDBConstruct 1–185； UniProt 1–185 Author chain D； PDBConstruct 1–185； UniProt 1–185 Author chain F； PDBConstruct 1–185； UniProt 1–185 Author chain H； PDBConstruct 1–185； UniProt 1–185 Author chain J； PDBConstruct 1–185； UniProt 1–185 Author chain L； PDBConstruct 1–185； UniProt 1–185 Author chain N； PDBConstruct 1–185； UniProt 1–185 Author chain P； PDBConstruct 1–185； UniProt 1–185

LCI5

OrganismNot specified

UniProt Q94ET8

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 24 Ribulose bisphosphate carboxylase large chain × 8 （P00877） Ribulose bisphosphate carboxylase small chain 2, chloroplastic × 8 （P08475） water × 16 Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
7jfo

1 assemblies

View Construct and Data Evidence
UniProt name Q94ET8_CHLRE
Isoform —
PDB entities 3
Chains and sequence ranges Author chain q； PDBConstruct 1–24； UniProt 49–72 Author chain r； PDBConstruct 1–24； UniProt 49–72 Author chain s； PDBConstruct 1–24； UniProt 49–72 Author chain t； PDBConstruct 1–24； UniProt 49–72 Author chain u； PDBConstruct 1–24； UniProt 49–72 Author chain v； PDBConstruct 1–24； UniProt 49–72 Author chain w； PDBConstruct 1–24； UniProt 49–72 Author chain x； PDBConstruct 1–24； UniProt 49–72

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

▼

2. Structure Basics 2. Structure Basics

Entry ID entry_id7jfo
Deposition date deposition_date2020-07-17
Structure title titleEPYC1(49-72)-bound Rubisco
Keywords keywordsRubisco, PLANT PROTEIN, Lyase, Pyrenoid; PLANT PROTEIN, Lyase
Experimental Method methodELECTRON MICROSCOPY
▼

3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

7jfo__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

7jfo__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

7jfo__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）47.85 Å
Rg (electron density)46.91 Å
Total Rg47.23 Å
Atom count37760
Residues4824
Excluded volume668550 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 7jfo__assembly_1__model_1 24-meric （24） Success 4.1.3-1-20251215 (887e7ef) View Download
▶

4. Crystallography and Experiment 4. Crystallography & Experiment

▶

5. Entities and Polymers Entities & Polymers (4)

▶

7. Citations (1)