7vba

Structure of the pre state human RNA Polymerase I Elongation Complex

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

DNA-directed RNA polymerase I subunit RPA1

Homo sapiens

UniProt O95602

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Other combination Heteromer Protein 13 DNA 2 RNA 1 DNA-directed RNA polymerase I subunit RPA2 × 1 (Q9H9Y6) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (O15160) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase I subunit RPA12 × 1 (Q9P1U0) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P0DPB6) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA-directed RNA polymerase I subunit RPA34 × 1 (O15446) DNA-directed RNA polymerase I subunit RPA43 × 1 (Q3B726) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q9GZS1) ;RNA (5'-R(P*UP*GP*CP*UP*GP*AP*CP*U)-3') ; × 1 ;DNA (5'-D(P*GP*CP*CP*AP*GP*AP*GP*AP*CP*AP*GP*CP*GP*AP*GP*TP*CP*AP*GP*CP*AP*A)-3') ; × 1 ;DNA (5'-D(P*A*CP*TP*GP*TP*CP*CP*TP*CP*TP*GP*GP*C)-3') ; × 1 ZINC ION × 5 MAGNESIUM ION × 1 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPA1_HUMAN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–1719; UniProt 1–1719

DNA-directed RNA polymerase I subunit RPA2

Homo sapiens

UniProt Q9H9Y6

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Other combination Heteromer Protein 13 DNA 2 RNA 1 DNA-directed RNA polymerase I subunit RPA1 × 1 (O95602) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (O15160) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase I subunit RPA12 × 1 (Q9P1U0) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P0DPB6) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA-directed RNA polymerase I subunit RPA34 × 1 (O15446) DNA-directed RNA polymerase I subunit RPA43 × 1 (Q3B726) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q9GZS1) ;RNA (5'-R(P*UP*GP*CP*UP*GP*AP*CP*U)-3') ; × 1 ;DNA (5'-D(P*GP*CP*CP*AP*GP*AP*GP*AP*CP*AP*GP*CP*GP*AP*GP*TP*CP*AP*GP*CP*AP*A)-3') ; × 1 ;DNA (5'-D(P*A*CP*TP*GP*TP*CP*CP*TP*CP*TP*GP*GP*C)-3') ; × 1 ZINC ION × 5 MAGNESIUM ION × 1 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPA2_HUMAN
Isoform —
PDB entities 2
Chains and sequence ranges Author chain B; PDBConstruct 1–1135; UniProt 1–1135

DNA-directed RNA polymerases I and III subunit RPAC1

Homo sapiens

UniProt O15160

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Other combination Heteromer Protein 13 DNA 2 RNA 1 DNA-directed RNA polymerase I subunit RPA1 × 1 (O95602) DNA-directed RNA polymerase I subunit RPA2 × 1 (Q9H9Y6) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase I subunit RPA12 × 1 (Q9P1U0) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P0DPB6) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA-directed RNA polymerase I subunit RPA34 × 1 (O15446) DNA-directed RNA polymerase I subunit RPA43 × 1 (Q3B726) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q9GZS1) ;RNA (5'-R(P*UP*GP*CP*UP*GP*AP*CP*U)-3') ; × 1 ;DNA (5'-D(P*GP*CP*CP*AP*GP*AP*GP*AP*CP*AP*GP*CP*GP*AP*GP*TP*CP*AP*GP*CP*AP*A)-3') ; × 1 ;DNA (5'-D(P*A*CP*TP*GP*TP*CP*CP*TP*CP*TP*GP*GP*C)-3') ; × 1 ZINC ION × 5 MAGNESIUM ION × 1 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPAC1_HUMAN
Isoform —
PDB entities 3
Chains and sequence ranges Author chain C; PDBConstruct 1–346; UniProt 1–346

DNA-directed RNA polymerases I, II, and III subunit RPABC1

Homo sapiens

UniProt P19388

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Other combination Heteromer Protein 13 DNA 2 RNA 1 DNA-directed RNA polymerase I subunit RPA1 × 1 (O95602) DNA-directed RNA polymerase I subunit RPA2 × 1 (Q9H9Y6) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (O15160) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase I subunit RPA12 × 1 (Q9P1U0) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P0DPB6) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA-directed RNA polymerase I subunit RPA34 × 1 (O15446) DNA-directed RNA polymerase I subunit RPA43 × 1 (Q3B726) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q9GZS1) ;RNA (5'-R(P*UP*GP*CP*UP*GP*AP*CP*U)-3') ; × 1 ;DNA (5'-D(P*GP*CP*CP*AP*GP*AP*GP*AP*CP*AP*GP*CP*GP*AP*GP*TP*CP*AP*GP*CP*AP*A)-3') ; × 1 ;DNA (5'-D(P*A*CP*TP*GP*TP*CP*CP*TP*CP*TP*GP*GP*C)-3') ; × 1 ZINC ION × 5 MAGNESIUM ION × 1 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPAB1_HUMAN
Isoform —
PDB entities 4
Chains and sequence ranges Author chain E; PDBConstruct 1–210; UniProt 1–210

DNA-directed RNA polymerases I, II, and III subunit RPABC2

Homo sapiens

UniProt P61218

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Other combination Heteromer Protein 13 DNA 2 RNA 1 DNA-directed RNA polymerase I subunit RPA1 × 1 (O95602) DNA-directed RNA polymerase I subunit RPA2 × 1 (Q9H9Y6) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (O15160) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase I subunit RPA12 × 1 (Q9P1U0) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P0DPB6) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA-directed RNA polymerase I subunit RPA34 × 1 (O15446) DNA-directed RNA polymerase I subunit RPA43 × 1 (Q3B726) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q9GZS1) ;RNA (5'-R(P*UP*GP*CP*UP*GP*AP*CP*U)-3') ; × 1 ;DNA (5'-D(P*GP*CP*CP*AP*GP*AP*GP*AP*CP*AP*GP*CP*GP*AP*GP*TP*CP*AP*GP*CP*AP*A)-3') ; × 1 ;DNA (5'-D(P*A*CP*TP*GP*TP*CP*CP*TP*CP*TP*GP*GP*C)-3') ; × 1 ZINC ION × 5 MAGNESIUM ION × 1 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPAB2_HUMAN
Isoform —
PDB entities 5
Chains and sequence ranges Author chain F; PDBConstruct 1–127; UniProt 1–127

DNA-directed RNA polymerases I, II, and III subunit RPABC3

Homo sapiens

UniProt P52434

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Other combination Heteromer Protein 13 DNA 2 RNA 1 DNA-directed RNA polymerase I subunit RPA1 × 1 (O95602) DNA-directed RNA polymerase I subunit RPA2 × 1 (Q9H9Y6) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (O15160) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerase I subunit RPA12 × 1 (Q9P1U0) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P0DPB6) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA-directed RNA polymerase I subunit RPA34 × 1 (O15446) DNA-directed RNA polymerase I subunit RPA43 × 1 (Q3B726) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q9GZS1) ;RNA (5'-R(P*UP*GP*CP*UP*GP*AP*CP*U)-3') ; × 1 ;DNA (5'-D(P*GP*CP*CP*AP*GP*AP*GP*AP*CP*AP*GP*CP*GP*AP*GP*TP*CP*AP*GP*CP*AP*A)-3') ; × 1 ;DNA (5'-D(P*A*CP*TP*GP*TP*CP*CP*TP*CP*TP*GP*GP*C)-3') ; × 1 ZINC ION × 5 MAGNESIUM ION × 1 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPAB3_HUMAN
Isoform —
PDB entities 6
Chains and sequence ranges Author chain H; PDBConstruct 1–150; UniProt 1–150

DNA-directed RNA polymerase I subunit RPA12

Homo sapiens

UniProt Q9P1U0

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Other combination Heteromer Protein 13 DNA 2 RNA 1 DNA-directed RNA polymerase I subunit RPA1 × 1 (O95602) DNA-directed RNA polymerase I subunit RPA2 × 1 (Q9H9Y6) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (O15160) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P0DPB6) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA-directed RNA polymerase I subunit RPA34 × 1 (O15446) DNA-directed RNA polymerase I subunit RPA43 × 1 (Q3B726) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q9GZS1) ;RNA (5'-R(P*UP*GP*CP*UP*GP*AP*CP*U)-3') ; × 1 ;DNA (5'-D(P*GP*CP*CP*AP*GP*AP*GP*AP*CP*AP*GP*CP*GP*AP*GP*TP*CP*AP*GP*CP*AP*A)-3') ; × 1 ;DNA (5'-D(P*A*CP*TP*GP*TP*CP*CP*TP*CP*TP*GP*GP*C)-3') ; × 1 ZINC ION × 5 MAGNESIUM ION × 1 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPA12_HUMAN
Isoform —
PDB entities 7
Chains and sequence ranges Author chain I; PDBConstruct 1–126; UniProt 1–126

DNA-directed RNA polymerases I, II, and III subunit RPABC5

Homo sapiens

UniProt P62875

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Other combination Heteromer Protein 13 DNA 2 RNA 1 DNA-directed RNA polymerase I subunit RPA1 × 1 (O95602) DNA-directed RNA polymerase I subunit RPA2 × 1 (Q9H9Y6) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (O15160) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase I subunit RPA12 × 1 (Q9P1U0) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P0DPB6) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA-directed RNA polymerase I subunit RPA34 × 1 (O15446) DNA-directed RNA polymerase I subunit RPA43 × 1 (Q3B726) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q9GZS1) ;RNA (5'-R(P*UP*GP*CP*UP*GP*AP*CP*U)-3') ; × 1 ;DNA (5'-D(P*GP*CP*CP*AP*GP*AP*GP*AP*CP*AP*GP*CP*GP*AP*GP*TP*CP*AP*GP*CP*AP*A)-3') ; × 1 ;DNA (5'-D(P*A*CP*TP*GP*TP*CP*CP*TP*CP*TP*GP*GP*C)-3') ; × 1 ZINC ION × 5 MAGNESIUM ION × 1 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPAB5_HUMAN
Isoform —
PDB entities 8
Chains and sequence ranges Author chain J; PDBConstruct 1–67; UniProt 1–67

DNA-directed RNA polymerases I and III subunit RPAC2

Homo sapiens

UniProt P0DPB6

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Other combination Heteromer Protein 13 DNA 2 RNA 1 DNA-directed RNA polymerase I subunit RPA1 × 1 (O95602) DNA-directed RNA polymerase I subunit RPA2 × 1 (Q9H9Y6) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (O15160) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase I subunit RPA12 × 1 (Q9P1U0) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA-directed RNA polymerase I subunit RPA34 × 1 (O15446) DNA-directed RNA polymerase I subunit RPA43 × 1 (Q3B726) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q9GZS1) ;RNA (5'-R(P*UP*GP*CP*UP*GP*AP*CP*U)-3') ; × 1 ;DNA (5'-D(P*GP*CP*CP*AP*GP*AP*GP*AP*CP*AP*GP*CP*GP*AP*GP*TP*CP*AP*GP*CP*AP*A)-3') ; × 1 ;DNA (5'-D(P*A*CP*TP*GP*TP*CP*CP*TP*CP*TP*GP*GP*C)-3') ; × 1 ZINC ION × 5 MAGNESIUM ION × 1 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPAC2_HUMAN
Isoform —
PDB entities 9
Chains and sequence ranges Author chain K; PDBConstruct 1–133; UniProt 1–133

DNA-directed RNA polymerases I, II, and III subunit RPABC4

Homo sapiens

UniProt P53803

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Other combination Heteromer Protein 13 DNA 2 RNA 1 DNA-directed RNA polymerase I subunit RPA1 × 1 (O95602) DNA-directed RNA polymerase I subunit RPA2 × 1 (Q9H9Y6) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (O15160) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase I subunit RPA12 × 1 (Q9P1U0) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P0DPB6) DNA-directed RNA polymerase I subunit RPA34 × 1 (O15446) DNA-directed RNA polymerase I subunit RPA43 × 1 (Q3B726) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q9GZS1) ;RNA (5'-R(P*UP*GP*CP*UP*GP*AP*CP*U)-3') ; × 1 ;DNA (5'-D(P*GP*CP*CP*AP*GP*AP*GP*AP*CP*AP*GP*CP*GP*AP*GP*TP*CP*AP*GP*CP*AP*A)-3') ; × 1 ;DNA (5'-D(P*A*CP*TP*GP*TP*CP*CP*TP*CP*TP*GP*GP*C)-3') ; × 1 ZINC ION × 5 MAGNESIUM ION × 1 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPAB4_HUMAN
Isoform —
PDB entities 10
Chains and sequence ranges Author chain L; PDBConstruct 1–58; UniProt 1–58

DNA-directed RNA polymerase I subunit RPA34

Homo sapiens

UniProt O15446

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Other combination Heteromer Protein 13 DNA 2 RNA 1 DNA-directed RNA polymerase I subunit RPA1 × 1 (O95602) DNA-directed RNA polymerase I subunit RPA2 × 1 (Q9H9Y6) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (O15160) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase I subunit RPA12 × 1 (Q9P1U0) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P0DPB6) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA-directed RNA polymerase I subunit RPA43 × 1 (Q3B726) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q9GZS1) ;RNA (5'-R(P*UP*GP*CP*UP*GP*AP*CP*U)-3') ; × 1 ;DNA (5'-D(P*GP*CP*CP*AP*GP*AP*GP*AP*CP*AP*GP*CP*GP*AP*GP*TP*CP*AP*GP*CP*AP*A)-3') ; × 1 ;DNA (5'-D(P*A*CP*TP*GP*TP*CP*CP*TP*CP*TP*GP*GP*C)-3') ; × 1 ZINC ION × 5 MAGNESIUM ION × 1 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPA34_HUMAN
Isoform —
PDB entities 11
Chains and sequence ranges Author chain N; PDBConstruct 1–510; UniProt 1–510

DNA-directed RNA polymerase I subunit RPA43

Homo sapiens

UniProt Q3B726

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Other combination Heteromer Protein 13 DNA 2 RNA 1 DNA-directed RNA polymerase I subunit RPA1 × 1 (O95602) DNA-directed RNA polymerase I subunit RPA2 × 1 (Q9H9Y6) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (O15160) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase I subunit RPA12 × 1 (Q9P1U0) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P0DPB6) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA-directed RNA polymerase I subunit RPA34 × 1 (O15446) DNA-directed RNA polymerase I subunit RPA49 × 1 (Q9GZS1) ;RNA (5'-R(P*UP*GP*CP*UP*GP*AP*CP*U)-3') ; × 1 ;DNA (5'-D(P*GP*CP*CP*AP*GP*AP*GP*AP*CP*AP*GP*CP*GP*AP*GP*TP*CP*AP*GP*CP*AP*A)-3') ; × 1 ;DNA (5'-D(P*A*CP*TP*GP*TP*CP*CP*TP*CP*TP*GP*GP*C)-3') ; × 1 ZINC ION × 5 MAGNESIUM ION × 1 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPA43_HUMAN
Isoform —
PDB entities 12
Chains and sequence ranges Author chain G; PDBConstruct 1–338; UniProt 1–338

DNA-directed RNA polymerase I subunit RPA49

Homo sapiens

UniProt Q9GZS1

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Other combination Heteromer Protein 13 DNA 2 RNA 1 DNA-directed RNA polymerase I subunit RPA1 × 1 (O95602) DNA-directed RNA polymerase I subunit RPA2 × 1 (Q9H9Y6) DNA-directed RNA polymerases I and III subunit RPAC1 × 1 (O15160) DNA-directed RNA polymerases I, II, and III subunit RPABC1 × 1 (P19388) DNA-directed RNA polymerases I, II, and III subunit RPABC2 × 1 (P61218) DNA-directed RNA polymerases I, II, and III subunit RPABC3 × 1 (P52434) DNA-directed RNA polymerase I subunit RPA12 × 1 (Q9P1U0) DNA-directed RNA polymerases I, II, and III subunit RPABC5 × 1 (P62875) DNA-directed RNA polymerases I and III subunit RPAC2 × 1 (P0DPB6) DNA-directed RNA polymerases I, II, and III subunit RPABC4 × 1 (P53803) DNA-directed RNA polymerase I subunit RPA34 × 1 (O15446) DNA-directed RNA polymerase I subunit RPA43 × 1 (Q3B726) ;RNA (5'-R(P*UP*GP*CP*UP*GP*AP*CP*U)-3') ; × 1 ;DNA (5'-D(P*GP*CP*CP*AP*GP*AP*GP*AP*CP*AP*GP*CP*GP*AP*GP*TP*CP*AP*GP*CP*AP*A)-3') ; × 1 ;DNA (5'-D(P*A*CP*TP*GP*TP*CP*CP*TP*CP*TP*GP*GP*C)-3') ; × 1 ZINC ION × 5 MAGNESIUM ION × 1 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RPA49_HUMAN
Isoform —
PDB entities 13
Chains and sequence ranges Author chain M; PDBConstruct 1–419; UniProt 1–419

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id7vba
Deposition date deposition_date2021-08-31
Structure title titleStructure of the pre state human RNA Polymerase I Elongation Complex
Keywords keywordsRNA Polymerase I, transcription, pre, state, TRANSCRIPTION-DNA-RNA complex; TRANSCRIPTION/DNA/RNA
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

7vba__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

7vba__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

7vba__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)51.48 Å
Rg (electron density)51.20 Å
Total Rg51.35 Å
Atom count33093
Residues4091
Excluded volume588230 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 7vba__assembly_1__model_1 hexadecameric (16) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (19)

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7. Citations (1)