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8e8l

9H2 Fab-poliovirus 1 complex

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Capsid protein VP1

OrganismNot specified

UniProt P03300

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 360 Capsid protein VP3 × 60 （B0L5R5） 9H2 Fab heavy chain × 60 9H2 Fab light chain × 60 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 6 Capsid protein VP3 × 1 （B0L5R5） 9H2 Fab heavy chain × 1 9H2 Fab light chain × 1 Consistent with protein count
3 Protein heterocomplex Heteromer Protein 30 Capsid protein VP3 × 5 （B0L5R5） 9H2 Fab heavy chain × 5 9H2 Fab light chain × 5 Consistent with protein count
4 Protein heterocomplex Heteromer Protein 36 Capsid protein VP3 × 6 （B0L5R5） 9H2 Fab heavy chain × 6 9H2 Fab light chain × 6 Consistent with protein count
5 Protein heterocomplex Heteromer Protein 6 Capsid protein VP3 × 1 （B0L5R5） 9H2 Fab heavy chain × 1 9H2 Fab light chain × 1 Consistent with protein count

Other States of the Same Protein in the Database

Monomer
1l1n 1l1n 1ra6 1ra7 1raj 1rdr 1tql 2bbp 2ijf 2ily 2ilz 2im0

32 assemblies; showing the first 12

Homodimer
1ng7 2ijd 2ijd

3 assemblies

Homotetramer
1hxs 1hxs 2plv 2plv 5z3q

5 assemblies

Other homooligomers
1hxs 1hxs 1hxs 1hxs 1pov 1pov 1pov 1pov 1pov 1pov 1xyr 1xyr

30 assemblies; showing the first 12

Heteromeric or nucleic-acid complex
1al2 1al2 1al2 1al2 1al2 1al2 1ar6 1ar6 1ar6 1ar6 1ar6 1ar6

181 assemblies; showing the first 12

View Construct and Data Evidence
UniProt name POLG_POL1M
Isoform —
PDB entities 1, 2, 4
Chains and sequence ranges Author chain 1； PDBConstruct 1–282； UniProt 600–881 Author chain 2； PDBConstruct 1–265； UniProt 77–341 Author chain 4； PDBConstruct 1–68； UniProt 2–69

Capsid protein VP3

OrganismNot specified

UniProt B0L5R5

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 360 Capsid protein VP1 × 60 （P03300） Capsid protein VP2 × 60 （P03300） Capsid protein VP4 × 60 （P03300） 9H2 Fab heavy chain × 60 9H2 Fab light chain × 60 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 6 Capsid protein VP1 × 1 （P03300） Capsid protein VP2 × 1 （P03300） Capsid protein VP4 × 1 （P03300） 9H2 Fab heavy chain × 1 9H2 Fab light chain × 1 Consistent with protein count
3 Protein heterocomplex Heteromer Protein 30 Capsid protein VP1 × 5 （P03300） Capsid protein VP2 × 5 （P03300） Capsid protein VP4 × 5 （P03300） 9H2 Fab heavy chain × 5 9H2 Fab light chain × 5 Consistent with protein count
4 Protein heterocomplex Heteromer Protein 36 Capsid protein VP1 × 6 （P03300） Capsid protein VP2 × 6 （P03300） Capsid protein VP4 × 6 （P03300） 9H2 Fab heavy chain × 6 9H2 Fab light chain × 6 Consistent with protein count
5 Protein heterocomplex Heteromer Protein 6 Capsid protein VP1 × 1 （P03300） Capsid protein VP2 × 1 （P03300） Capsid protein VP4 × 1 （P03300） 9H2 Fab heavy chain × 1 9H2 Fab light chain × 1 Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
8e8l 8e8l 8e8l 8e8l 8e8l

5 assemblies

View Construct and Data Evidence
UniProt name B0L5R5_9ENTO
Isoform —
PDB entities 3
Chains and sequence ranges Author chain 3； PDBConstruct 1–235； UniProt 342–576

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id8e8l
Deposition date deposition_date2022-08-25
Structure title title9H2 Fab-poliovirus 1 complex
Keywords keywordsComplex, Fab, poliovirus, neutralizing, VIRUS-IMMUNE SYSTEM complex; VIRUS/IMMUNE SYSTEM
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

8e8l__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

8e8l__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 1010 1011 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

8e8l__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）0.00 Å
Rg (electron density)140.70 Å
Total Rg140.80 Å
Atom count499080
Residues64080
Excluded volume8852100 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 8e8l__assembly_1__model_1 360-meric （360） Success 4.1.3-1-20251215 (887e7ef) View Download
2 1 8e8l__assembly_2__model_1 hexameric （6） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
3 1 8e8l__assembly_3__model_1 30-meric （30） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
4 1 8e8l__assembly_4__model_1 36-meric （36） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
5 1 8e8l__assembly_5__model_1 hexameric （6） Excluded — —
Exclusion reason： Auxiliary symmetry representation; not a complete or representative biological assembly.
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (6)

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6. Fold Classification (SCOP + CATH) 3 domains

CATH v4.4 (3 domains)

Domain ID domain_id8e8l201
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology120 — Jelly Rolls
Homologous superfamily homologous superfamily20 —
Domain ID domain_id8e8lH01
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily10 — Immunoglobulins
Domain ID domain_id8e8lL01
Class class2 — Mainly Beta
Architecture architecture60 — Sandwich
Topology topology40 — Immunoglobulin-like
Homologous superfamily homologous superfamily10 — Immunoglobulins
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7. Citations (1)