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8yfm

Crystal structure of FIP200 claw/TNIP1_FIR_pS122

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

RB1-inducible coiled-coil protein 1

Homo sapiens

UniProt Q8TDY2

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 2 TNIP1_FIR_pS122 peptide × 1 （Q15025） SULFATE ION × 1 water × 2 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 2 TNIP1_FIR_pS122 peptide × 1 （Q15025） GLYCEROL × 1 water × 2 Consistent with protein count

Other States of the Same Protein in the Database

Monomer
6dce

1 assemblies

Homodimer
6gma 6gma 6gma 7czg 7czg

5 assemblies

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
7czm 7d0e 7ea2 7eaa 8soi 8sqz 8srm 8w6b 8yfk 8yfk 8yfk 8yfk

21 assemblies; showing the first 12

View Construct and Data Evidence
UniProt name RBCC1_HUMAN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 1–105； UniProt 1490–1594 Author chain D； PDBConstruct 1–105； UniProt 1490–1594

TNIP1_FIR_pS122 peptide

OrganismNot specified

UniProt Q15025

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 2 RB1-inducible coiled-coil protein 1 × 1 （Q8TDY2） SULFATE ION × 1 water × 2 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 2 RB1-inducible coiled-coil protein 1 × 1 （Q8TDY2） GLYCEROL × 1 water × 2 Consistent with protein count

Other States of the Same Protein in the Database

Monomer

None

Homodimer

None

Homotetramer

None

Other homooligomers

None

Heteromeric or nucleic-acid complex
7eal 7eal 7eao 7eb9 8yfk 8yfk 8yfk 8yfk 8yfm 8yfm 8yfn 8yfn

13 assemblies; showing the first 12

View Construct and Data Evidence
UniProt name TNIP1_HUMAN
Isoform —
PDB entities 2
Chains and sequence ranges Author chain B； PDBConstruct 1–11； UniProt 118–128 Author chain E； PDBConstruct 1–11； UniProt 118–128

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id8yfm
Deposition date deposition_date2024-02-24
Structure title titleCrystal structure of FIP200 claw/TNIP1_FIR_pS122
Keywords keywordsphosphorylation, selective mitophagy, PROTEIN BINDING; PROTEIN BINDING
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

8yfm__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

8yfm__assembly_1__model_1 | I(q)

10-2 10-1 105 106 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

8yfm__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg（Guinier）15.11 Å
Rg (electron density)13.72 Å
Total Rg15.15 Å
Atom count854
Residues104
Excluded volume15319 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 8yfm__assembly_1__model_1 dimeric （2） Success 4.1.3-1-20251215 (887e7ef) View Download
2 1 8yfm__assembly_2__model_1 dimeric （2） Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (5)

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7. Citations (1)