SAXSdb — 9jpr

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1. Protein Identity and Related Structures Protein Identity & Related Structures

Glutathione S-transferase class-mu 26 kDa isozyme,Viral capsid 39 protein

Helicoverpa armigera nucleopolyhedrovirus

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Insufficient information	Homooligomer	Protein 8	No other associated polymer	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	GST26_SCHJA
Isoform	—
PDB entities	1
Chains and sequence ranges	Author chain A； PDBConstruct 1–218； UniProt 1–218 Author chain B； PDBConstruct 1–218； UniProt 1–218 Author chain C； PDBConstruct 1–218； UniProt 1–218 Author chain D； PDBConstruct 1–218； UniProt 1–218 Author chain E； PDBConstruct 1–218； UniProt 1–218 Author chain F； PDBConstruct 1–218； UniProt 1–218 Author chain G； PDBConstruct 1–218； UniProt 1–218 Author chain H； PDBConstruct 1–218； UniProt 1–218

Glutathione S-transferase class-mu 26 kDa isozyme,Viral capsid 39 protein

Helicoverpa armigera nucleopolyhedrovirus

UniProt Q77K63

State in the Current Structure

Assembly	Physical composition	Protein state	Molecular copy count	Associated components	Data consistency
1	Insufficient information	Homooligomer	Protein 8	No other associated polymer	Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence

UniProt name	Q77K63_9ABAC
Isoform	—
PDB entities	1
Chains and sequence ranges	Author chain A； PDBConstruct 237–529； UniProt 1–293 Author chain B； PDBConstruct 237–529； UniProt 1–293 Author chain C； PDBConstruct 237–529； UniProt 1–293 Author chain D； PDBConstruct 237–529； UniProt 1–293 Author chain E； PDBConstruct 237–529； UniProt 1–293 Author chain F； PDBConstruct 237–529； UniProt 1–293 Author chain G； PDBConstruct 237–529； UniProt 1–293 Author chain H； PDBConstruct 237–529； UniProt 1–293

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id	9jpr
Deposition date deposition_date	2024-09-26
Structure title title	Local refinement of H11 nanotubes assembled from baculovirus capsid protein
Keywords keywords	capsid protein, self-assembly, Baculovirus, nanotube, VIRAL PROTEIN; VIRAL PROTEIN
Experimental Method method	ELECTRON MICROSCOPY

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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

9jpr__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

9jpr__assembly_1__model_1 | I(q)

100 plotted points; both axes use logarithmic scales.

9jpr__assembly_1__model_1 | P(r) · Pending

P(r) will be calculated and displayed separately for the same assembly/model.

Rg（Guinier）	55.95 Å
Rg (electron density)	56.15 Å
Total Rg	56.12 Å
Atom count	17424
Residues	2160
Excluded volume	310360 Å³
Maximum q	0.500 Å⁻¹

Assembly	Model	Structure unit	Oligomeric description	Status	CRYSOL	Actions
1	1	`9jpr__assembly_1__model_1`	octameric （8）	Success	4.1.3-1-20251215 (887e7ef)	View Download

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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (1)

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Unit-cell length a length_a	1.000 Å
Unit-cell length b length_b	1.000 Å
Unit-cell length c length_c	1.000 Å
Unit-cell angle α angle_alpha	90.00 °
Unit-cell angle β angle_beta	90.00 °
Unit-cell angle γ angle_gamma	90.00 °
Molecules per unit cell Z z_pdb	—

Space group space_group	P 1
Space-group number int_tables_number	1
Crystal system crystal_system	—

Resolution resolution	2.80 Å
Resolution测定Method resolution_method	—
颗粒数 num_particles	5975424

Description description	Glutathione S-transferase class-mu 26 kDa isozyme,Viral capsid 39 protein
Molecular weight formula_weight	60525.2 kDa
EC 编号 ec_number	2.5.1.18
Source method src_method	man
Copy count entity_count	8

Polymer type type	polypeptide(L)
Chain IDs strand_id	A,B,C,D,E,F,G,H
Atom count atom_count	17424

Local refinement of H11 nanotubes assembled from baculovirus capsid protein

1. Protein Identity and Related Structures Protein Identity & Related Structures

Glutathione S-transferase class-mu 26 kDa isozyme,Viral capsid 39 protein

State in the Current Structure

Other States of the Same Protein in the Database

Glutathione S-transferase class-mu 26 kDa isozyme,Viral capsid 39 protein

State in the Current Structure

Other States of the Same Protein in the Database

2. Structure Basics 2. Structure Basics

3. Official assembly/model SAXS Official SAXS Profiles

9jpr__assembly_1__model_1

9jpr__assembly_1__model_1 | I(q)

9jpr__assembly_1__model_1 | P(r) · Pending

4. Crystallography and Experiment 4. Crystallography & Experiment

Unit cell Unit Cell

Symmetry Symmetry

冷冻电镜 EM 3D

5. Entities and Polymers Entities & Polymers (1)

Entity 1 Entity 1 polymer

Polymer Polymer

Source Source

7. Citations (1)

Source organism organism	Helicoverpa armigera nucleopolyhedrovirus
NCBI taxonomy ID ncbi_taxonomy_id	51313
Host organism host_organism	Escherichia coli BL21

Local refinement of H11 nanotubes assembled from baculovirus capsid protein

1. Protein Identity and Related Structures Protein Identity & Related Structures

Glutathione S-transferase class-mu 26 kDa isozyme,Viral capsid 39 protein

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

Glutathione S-transferase class-mu 26 kDa isozyme,Viral capsid 39 protein

State in the Current Structure

Other States of the Same Protein in the Database

Monomer

Homodimer

Homotetramer

Other homooligomers

Heteromeric or nucleic-acid complex

2. Structure Basics 2. Structure Basics

3. Official assembly/model SAXS Official SAXS Profiles

9jpr__assembly_1__model_1

9jpr__assembly_1__model_1 | I(q)

9jpr__assembly_1__model_1 | P(r) · Pending

4. Crystallography and Experiment 4. Crystallography & Experiment

Unit cell Unit Cell

Symmetry Symmetry

冷冻电镜 EM 3D

5. Entities and Polymers Entities & Polymers (1)

Entity 1 Entity 1 polymer

Polymer Polymer

Source Source

7. Citations (1)