9riv
Population B fibril generated from the Heterotypic interaction of Abeta40 and Medin.
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9riv |
| deposition_date | 2025-06-11 |
| title | Population B fibril generated from the Heterotypic interaction of Abeta40 and Medin. |
| keywords | Amyloid Beta 40, Aggregation, Neurodegeneration, Medin, PROTEIN FIBRIL; PROTEIN FIBRIL |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 24.04 Å |
| rg_electron | 22.35 Å |
| i0 | 31701900.00 |
| molecular_weight | 43098.0 kDa |
| excluded_volume | 53670 ų |
| envelope_volume | 65405 ų |
| shell_volume | 24388 ų |
| envelope_diameter | 70.4 Å |
| shell_rg | 29.14 Å |
| envelope_rg | 22.34 Å |
| shape_rg | 22.43 Å |
| total_rg | 22.88 Å |
| total_atoms | 3050 |
| n_residues | 400 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 69.7 Å |
| rg_real | 23.93 Å |
| rg_real_error | 0.35 Å |
| i0_real | 3.1700e+07 |
| i0_real_error | 3.5630e+05 |
| rg_reciprocal | 23.96 Å |
| i0_reciprocal | 31700000.0000 |
| total_estimate | 0.9141 |
| solution_quality | EXCELLENT a EXCELLENT solution |
| n_peaks | 3 |
| r_peak_primary | 25.0 Å |
| skewness | 0.137 |
| kurtosis | -0.682 |
| angular_range | — – 0.3300 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 5136000.0000 |
| n_real_points | 65 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.989; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 1.000; Smooth: 0.914 |