9rsm
NetF 9mer pre-pore structure on 2N2 nanodiscs.
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9rsm |
| deposition_date | 2025-07-01 |
| title | NetF 9mer pre-pore structure on 2N2 nanodiscs. |
| keywords | pore forming toxin, hemolysin, clostridium perfringens, pre-pore., TOXIN; TOXIN |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 44.84 Å |
| rg_electron | 44.25 Å |
| i0 | 1067320000.00 |
| molecular_weight | 272380.0 kDa |
| excluded_volume | 340830 ų |
| envelope_volume | 481960 ų |
| shell_volume | 85575 ų |
| envelope_diameter | 125.8 Å |
| shell_rg | 55.00 Å |
| envelope_rg | 42.29 Å |
| shape_rg | 44.30 Å |
| total_rg | 44.51 Å |
| total_atoms | 37881 |
| n_residues | 2394 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 124.4 Å |
| rg_real | 44.45 Å |
| rg_real_error | 0.63 Å |
| i0_real | 1.0670e+09 |
| i0_real_error | 1.6810e+07 |
| rg_reciprocal | 44.83 Å |
| i0_reciprocal | 1068000000.0000 |
| total_estimate | 0.8694 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 1 |
| r_peak_primary | 67.5 Å |
| skewness | -0.139 |
| kurtosis | -0.772 |
| angular_range | — – 0.1750 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 164400000.0000 |
| n_real_points | 36 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.968; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.976; Smooth: 0.417 |