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9v27

Cryo- EM structure of small subunit (body) of 75S ribosome with A/P- & P/E- tRNAs from Entamoeba histolytica

Method: ELECTRON MICROSCOPY Dmax: 201.0 Å Quality: GOOD

SAXS Profile

SAXS profile for 9v27

P(r) Distribution

P(r) distribution for 9v27
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1. Structure Basics

entry_id9v27
deposition_date2025-05-19
last_revision2025-10-08
titleCryo- EM structure of small subunit (body) of 75S ribosome with A/P- & P/E- tRNAs from Entamoeba histolytica
keywordsSSU-body of 75S Ribosome, A/P-tRNA, P/E-tRNA, Entamoeba histolytica, Ribosome; RIBOSOME
methodELECTRON MICROSCOPY
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Download Data

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2. SAXS Parameters (CRYSOL)

rg_guinier59.14 Å
rg_electron59.93 Å
i010982500000.00
molecular_weight608710.0 kDa
excluded_volume647320 ų
envelope_volume1056900 ų
shell_volume143390 ų
envelope_diameter217.1 Å
shell_rg63.89 Å
envelope_rg60.01 Å
shape_rg59.93 Å
total_rg59.97 Å
total_atoms41199
n_residues3279
n_harmonics20
q_range— – 0.5000 Å−1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3
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3. P(r) Analysis (GNOM)

dmax201.0 Å
rg_real59.22 Å
rg_real_error1.61 Å
i0_real1.0980e+10
i0_real_error2.4230e+08
rg_reciprocal59.06 Å
i0_reciprocal10980000000.0000
total_estimate0.8560
solution_quality GOOD a GOOD solution
n_peaks1
r_peak_primary67.0 Å
skewness0.408
kurtosis-0.296
angular_range— – 0.1350 Å−1
current_alpha0.0001
highest_alpha962700000.0000
n_real_points28
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.825; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.999; Smooth: 0.651
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4. Crystallography & Experiment

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5. Entities & Polymer Info (22)

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6. Citations (1)

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7. Files & Curves (10)