9xbm
Cryo-EM structure of Sup35NM S17R fibril formed at 37 degrees (S17R37C)
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9xbm |
| deposition_date | 2025-10-24 |
| last_revision | 2025-12-10 |
| title | Cryo-EM structure of Sup35NM S17R fibril formed at 37 degrees (S17R37C) |
| keywords | Yeast, Sup35NM, Amyloid, PROTEIN FIBRIL; PROTEIN FIBRIL |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 22.35 Å |
| rg_electron | 21.70 Å |
| i0 | 29248000.00 |
| molecular_weight | 37810.0 kDa |
| excluded_volume | 45439 ų |
| envelope_volume | 52042 ų |
| shell_volume | 20674 ų |
| envelope_diameter | 79.4 Å |
| shell_rg | 28.20 Å |
| envelope_rg | 22.40 Å |
| shape_rg | 21.69 Å |
| total_rg | 22.45 Å |
| total_atoms | 2685 |
| n_residues | 325 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 79.8 Å |
| rg_real | 22.48 Å |
| rg_real_error | 0.79 Å |
| i0_real | 2.9250e+07 |
| i0_real_error | 3.8110e+05 |
| rg_reciprocal | 22.45 Å |
| i0_reciprocal | 29250000.0000 |
| total_estimate | 0.7495 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 3 |
| r_peak_primary | 23.0 Å |
| skewness | 0.564 |
| kurtosis | -0.107 |
| angular_range | — – 0.3550 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 9758000.0000 |
| n_real_points | 67 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.631; Stabil: 0.998; Sysdev: 1.000; Positv: 1.000; Valcen: 0.854; Smooth: 0.000 |