9xbo
Cryo-EM structure of Sup35NM fibril formed at 37 degrees (Sc37)
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9xbo |
| deposition_date | 2025-10-24 |
| last_revision | 2025-12-10 |
| title | Cryo-EM structure of Sup35NM fibril formed at 37 degrees (Sc37) |
| keywords | Yeast, Sup35NM, Amyloid, PROTEIN FIBRIL; PROTEIN FIBRIL |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 25.24 Å |
| rg_electron | 24.39 Å |
| i0 | 59412600.00 |
| molecular_weight | 53110.0 kDa |
| excluded_volume | 63150 ų |
| envelope_volume | 76976 ų |
| shell_volume | 26470 ų |
| envelope_diameter | 79.8 Å |
| shell_rg | 31.62 Å |
| envelope_rg | 24.63 Å |
| shape_rg | 24.32 Å |
| total_rg | 25.29 Å |
| total_atoms | 3770 |
| n_residues | 460 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 79.5 Å |
| rg_real | 25.23 Å |
| rg_real_error | 0.50 Å |
| i0_real | 5.9410e+07 |
| i0_real_error | 8.6420e+05 |
| rg_reciprocal | 25.23 Å |
| i0_reciprocal | 59410000.0000 |
| total_estimate | 0.9058 |
| solution_quality | EXCELLENT a EXCELLENT solution |
| n_peaks | 2 |
| r_peak_primary | 27.8 Å |
| skewness | 0.275 |
| kurtosis | -0.576 |
| angular_range | — – 0.3150 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 9500000.0000 |
| n_real_points | 64 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.951; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.967; Smooth: 0.950 |