9xbp
Cryo-EM structure of Sup35NM S17R fibril formed at 4 degrees (S17R4C)
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9xbp |
| deposition_date | 2025-10-24 |
| last_revision | 2025-12-10 |
| title | Cryo-EM structure of Sup35NM S17R fibril formed at 4 degrees (S17R4C) |
| keywords | Yeast, Sup35NM, Amyloid, PROTEIN FIBRIL; PROTEIN FIBRIL |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 19.22 Å |
| rg_electron | 18.35 Å |
| i0 | 21311000.00 |
| molecular_weight | 31794.0 kDa |
| excluded_volume | 38122 ų |
| envelope_volume | 43815 ų |
| shell_volume | 19593 ų |
| envelope_diameter | 58.3 Å |
| shell_rg | 24.89 Å |
| envelope_rg | 18.66 Å |
| shape_rg | 18.31 Å |
| total_rg | 19.23 Å |
| total_atoms | 2250 |
| n_residues | 280 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 58.1 Å |
| rg_real | 19.11 Å |
| rg_real_error | 0.28 Å |
| i0_real | 2.1310e+07 |
| i0_real_error | 2.4370e+05 |
| rg_reciprocal | 19.13 Å |
| i0_reciprocal | 21310000.0000 |
| total_estimate | 0.7495 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 2 |
| r_peak_primary | 21.8 Å |
| skewness | 0.155 |
| kurtosis | -0.549 |
| angular_range | — – 0.4150 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 5044000.0000 |
| n_real_points | 73 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.954; Stabil: 1.000; Sysdev: 0.295; Positv: 1.000; Valcen: 0.995; Smooth: 0.997 |