9yds
H-ring subunit FlgO and FlgP in Vibrio cholerae at assembled, opened state
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9yds |
| deposition_date | 2025-09-23 |
| title | H-ring subunit FlgO and FlgP in Vibrio cholerae at assembled, opened state |
| keywords | In situ cryo-EM, sheathed flagellar motor, Vibrio cholerae, H-ring, assembled state, MOTOR PROTEIN; MOTOR PROTEIN |
| method | ELECTRON MICROSCOPY |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | — Å |
| rg_electron | 187.90 Å |
| i0 | 53008800000.00 |
| molecular_weight | 1907300.0 kDa |
| excluded_volume | 2360600 ų |
| envelope_volume | 6277800 ų |
| shell_volume | 275570 ų |
| envelope_diameter | 453.9 Å |
| shell_rg | 208.50 Å |
| envelope_rg | 162.50 Å |
| shape_rg | 188.00 Å |
| total_rg | 187.90 Å |
| total_atoms | 133980 |
| n_residues | 17052 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 443.5 Å |
| rg_real | 186.00 Å |
| rg_real_error | 1.49 Å |
| i0_real | 5.2030e+10 |
| i0_real_error | 1.3030e+09 |
| rg_reciprocal | 126.50 Å |
| i0_reciprocal | 37600000000.0000 |
| total_estimate | 0.7188 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 2 |
| r_peak_primary | 332.6 Å |
| skewness | -0.318 |
| kurtosis | -1.182 |
| angular_range | — – 0.0400 Å−1 |
| current_alpha | 0.6657 |
| highest_alpha | 632100000.0000 |
| n_real_points | 9 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.014; Oscil: 0.547; Stabil: 0.889; Sysdev: 1.000; Positv: 1.000; Valcen: 0.040; Smooth: 0.000 |