9yjl
Joint X-ray/neutron structure of wild-type Bacillus halodurans RNase H1 in the apo-form
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9yjl |
| deposition_date | 2025-10-03 |
| title | Joint X-ray/neutron structure of wild-type Bacillus halodurans RNase H1 in the apo-form |
| keywords | rna hydrolase, nucleic acid binding, HYDROLASE; HYDROLASE |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 16.07 Å |
| rg_electron | 14.70 Å |
| i0 | 4637560.00 |
| molecular_weight | 17179.0 kDa |
| excluded_volume | 22035 ų |
| envelope_volume | 25149 ų |
| shell_volume | 14103 ų |
| envelope_diameter | 54.1 Å |
| shell_rg | 20.94 Å |
| envelope_rg | 15.35 Å |
| shape_rg | 14.85 Å |
| total_rg | 15.55 Å |
| total_atoms | 2359 |
| n_residues | 134 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 56.1 Å |
| rg_real | 15.98 Å |
| rg_real_error | 0.33 Å |
| i0_real | 4.6380e+06 |
| i0_real_error | 5.9820e+04 |
| rg_reciprocal | 15.99 Å |
| i0_reciprocal | 4638000.0000 |
| total_estimate | 0.7775 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 19.9 Å |
| skewness | 0.202 |
| kurtosis | -0.294 |
| angular_range | — – 0.4950 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 1549000.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.705; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.988; Smooth: 0.000 |