9yjm
Joint X-ray/neutron structure of D132N Bacillus halodurans RNase H1 in the apo-form
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9yjm |
| deposition_date | 2025-10-03 |
| title | Joint X-ray/neutron structure of D132N Bacillus halodurans RNase H1 in the apo-form |
| keywords | rna hydrolase, nucleic acid binding, HYDROLASE; HYDROLASE |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 16.13 Å |
| rg_electron | 14.71 Å |
| i0 | 4474200.00 |
| molecular_weight | 16954.0 kDa |
| excluded_volume | 21803 ų |
| envelope_volume | 25177 ų |
| shell_volume | 14122 ų |
| envelope_diameter | 52.3 Å |
| shell_rg | 21.03 Å |
| envelope_rg | 15.30 Å |
| shape_rg | 14.83 Å |
| total_rg | 15.68 Å |
| total_atoms | 2330 |
| n_residues | 134 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 52.0 Å |
| rg_real | 16.03 Å |
| rg_real_error | 0.30 Å |
| i0_real | 4.4740e+06 |
| i0_real_error | 4.7990e+04 |
| rg_reciprocal | 16.04 Å |
| i0_reciprocal | 4474000.0000 |
| total_estimate | 0.6747 |
| solution_quality | REASONABLE a REASONABLE solution |
| n_peaks | 3 |
| r_peak_primary | 20.4 Å |
| skewness | 0.182 |
| kurtosis | -0.327 |
| angular_range | — – 0.4950 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 1433000.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.832; Stabil: 0.999; Sysdev: 0.424; Positv: 1.000; Valcen: 0.999; Smooth: 0.000 |