The ubiquitin-associated domain of human thirty-eight negative kinase-1 rigidly fused to the 1TEL crystallization chaperone

entry_id	9z2l
deposition_date	2025-11-05
last_revision	2025-11-26
title	The ubiquitin-associated domain of human thirty-eight negative kinase-1 rigidly fused to the 1TEL crystallization chaperone
keywords	;Sterile Alpha Motif (SAM) of Human Translocation ETS Leukemia (TEL), protein crystallization chaperone, TELSAM, ETV6, TRANSCRIPTION, 1TEL Crystallization Chaperone, ONCOPROTEIN, TNK1, UBA, Ubiquitin-Associated Domain, Thirty-eight Negative Kinase-1 ;; ONCOPROTEIN
method	X-RAY DIFFRACTION

rg_guinier	23.16 Å
rg_electron	22.28 Å
i0	19256900.00
molecular_weight	32559.0 kDa
excluded_volume	40425 ų
envelope_volume	50889 ų
shell_volume	20157 ų
envelope_diameter	73.0 Å
shell_rg	27.87 Å
envelope_rg	22.11 Å
shape_rg	22.26 Å
total_rg	23.10 Å
total_atoms	2304
n_residues	305
n_harmonics	20
q_range	— – 0.5000 Å−1
n_points	101
shell_type	directional
solvent_density	0.3340 e/ų
contrast_shell	0.0300 e/ų
crysol_version	4.1.3

dmax	71.8 Å
rg_real	23.12 Å
rg_real_error	0.44 Å
i0_real	1.9260e+07
i0_real_error	2.4870e+05
rg_reciprocal	23.13 Å
i0_reciprocal	19260000.0000
total_estimate	0.9131
solution_quality	EXCELLENT a EXCELLENT solution
n_peaks	1
r_peak_primary	70.7 Å
skewness	0.235
kurtosis	-0.548
angular_range	— – 0.3450 Å−1
current_alpha	0.0000
highest_alpha	4212000.0000
n_real_points	66
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.965; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.992; Smooth: 0.978

Unit Cell

length_a	38.004 Å
length_b	77.854 Å
length_c	118.995 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	8

Symmetry

space_group	P 21 21 21
int_tables_number	19
crystal_system	orthorhombic

Refinement

resolution	2.020 Å
resolution_low	59.500 Å
r_factor	—
r_work	0.2307
r_free	0.2739

Diffraction

temperature

100.0 K

Files (7)

• pr_distribution /app/data/pr_computation/z2/9z2l/pr_distribution.json
• pr_output /app/data/pr_computation/z2/9z2l/9z2l.pr.out
• pr_plot /app/data/visualization/pr_computation/z2/9z2l/9z2l_pr_distribution.png
• saxs_curve_dat /app/data/saxs_computation/z2/9z2l/9z2l.dat
• saxs_fit /app/data/saxs_computation/z2/9z2l/9z2l.fit
• saxs_log /app/data/saxs_computation/z2/9z2l/9z2l.log
• saxs_plot /app/data/visualization/saxs_computation/z2/9z2l/9z2l_saxs_profile.png

Curves (3)

fit	/app/data/saxs_computation/z2/9z2l/9z2l.fit
pddf	/app/data/pr_computation/z2/9z2l/9z2l.pr.out
profile	/app/data/saxs_computation/z2/9z2l/9z2l.dat