9znh
Crystal Structure of 6,7-dimethyl-8-ribityllumazine synthase from Bordetella pertussis
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9znh |
| deposition_date | 2025-12-12 |
| last_revision | 2025-12-24 |
| title | Crystal Structure of 6,7-dimethyl-8-ribityllumazine synthase from Bordetella pertussis |
| keywords | SSGCID, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, RIBOFLAVIN SYNTHASE, TRANSFERASE; TRANSFERASE |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 27.13 Å |
| rg_electron | 25.94 Å |
| i0 | 100480000.00 |
| molecular_weight | 77178.0 kDa |
| excluded_volume | 96052 ų |
| envelope_volume | 114990 ų |
| shell_volume | 35703 ų |
| envelope_diameter | 84.7 Å |
| shell_rg | 34.24 Å |
| envelope_rg | 25.85 Å |
| shape_rg | 25.97 Å |
| total_rg | 26.69 Å |
| total_atoms | 5406 |
| n_residues | 760 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 80.7 Å |
| rg_real | 26.96 Å |
| rg_real_error | 0.51 Å |
| i0_real | 1.0050e+08 |
| i0_real_error | 1.3180e+06 |
| rg_reciprocal | 27.01 Å |
| i0_reciprocal | 100500000.0000 |
| total_estimate | 0.9121 |
| solution_quality | EXCELLENT a EXCELLENT solution |
| n_peaks | 2 |
| r_peak_primary | 33.4 Å |
| skewness | 0.144 |
| kurtosis | -0.544 |
| angular_range | — – 0.2900 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 26690000.0000 |
| n_real_points | 59 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.965; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.987; Smooth: 0.972 |