Current Protein Identity:P03732
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Difference tags compare only the current result set; every original PDB and assembly record remains separate.
Related-Structure Differences
Each row represents one biological assembly in one PDB entry; multiple monomers of the same protein are listed separately.
| PDB Entry | Assembly / Oligomeric State | Construct | Mutations and Modifications | Ligands, Ions and Non-polymers | Experimental Method | Experimental Conditions | Structure Quality |
|---|---|---|---|---|---|---|---|
| 1Z1Z NMR structure of the gpu tail protein from lambda bacteriophage Deposited 2005-03-07 | Assembly 1 Protein monomer Monomer;Protein × 1 PDB declaration: monomeric(1) Consistent with protein count |
Chain A
1–131(131 aa)
|
Not recorded | No recorded non-water small molecule | SOLUTION NMR |
NMR measurement conditions
pH 7.8;293 K;Ionic strength (raw mmCIF value) 50 mM KCl;Pressure 1
NMR sample composition
0.9 mM gpU, U-15N,13C, 10 mM Tris-d11, pH 7.8, 50 mM potassium chloride, 0.02% sodium azide, 10% D2O, 90% H2O | 10% D2O, 90% H2O
|
Resolution not provided |
| 3FZ2 Crystal structure of the tail terminator protein from phage lambda (gpU-D74A) Deposited 2009-01-23 | Assembly 1 Protein homooligomer Homooligomer;Protein × 6 PDB declaration: hexameric(6) Consistent with protein count |
Chain A
1–131(131 aa)
Chain B
1–131(131 aa)
Chain E
1–131(131 aa)
Chain F
1–131(131 aa)
Chain I
1–131(131 aa)
Chain K
1–131(131 aa)
|
Mutation:D74A Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:D74A Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:D74A Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:D74A Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:D74A Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:D74A Non-standard monomer:Yes (specific site not provided by mmCIF) | SO4 SULFATE ION × 7 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;298 K;0.2M Di-ammonium tartrate, 2.2M Ammonium sulfate, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 2.70 Å R-free 0.283 |
| 3FZ2 Crystal structure of the tail terminator protein from phage lambda (gpU-D74A) Deposited 2009-01-23 | Assembly 2 Protein homooligomer Homooligomer;Protein × 6 PDB declaration: hexameric(6) Consistent with protein count |
Chain C
1–131(131 aa)
Chain D
1–131(131 aa)
Chain G
1–131(131 aa)
Chain H
1–131(131 aa)
Chain J
1–131(131 aa)
Chain L
1–131(131 aa)
|
Mutation:D74A Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:D74A Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:D74A Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:D74A Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:D74A Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:D74A Non-standard monomer:Yes (specific site not provided by mmCIF) | SO4 SULFATE ION × 6 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;298 K;0.2M Di-ammonium tartrate, 2.2M Ammonium sulfate, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 2.70 Å R-free 0.283 |
| 3FZ2 Crystal structure of the tail terminator protein from phage lambda (gpU-D74A) Deposited 2009-01-23 | Assembly 3 Protein homooligomer Homooligomer;Protein × 12 PDB declaration: dodecameric(12) Consistent with protein count |
Chain A
1–131(131 aa)
Chain B
1–131(131 aa)
Chain C
1–131(131 aa)
Chain D
1–131(131 aa)
Chain E
1–131(131 aa)
Chain F
1–131(131 aa)
Chain G
1–131(131 aa)
Chain H
1–131(131 aa)
Chain I
1–131(131 aa)
Chain J
1–131(131 aa)
Chain K
1–131(131 aa)
Chain L
1–131(131 aa)
|
Mutation:D74A Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:D74A Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:D74A Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:D74A Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:D74A Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:D74A Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:D74A Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:D74A Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:D74A Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:D74A Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:D74A Non-standard monomer:Yes (specific site not provided by mmCIF) Mutation:D74A Non-standard monomer:Yes (specific site not provided by mmCIF) | SO4 SULFATE ION × 13 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;298 K;0.2M Di-ammonium tartrate, 2.2M Ammonium sulfate, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 2.70 Å R-free 0.283 |
| 3FZB Crystal structure of the tail terminator protein from phage lambda (gpU-WT) Deposited 2009-01-24 | Assembly 1 Protein homooligomer Homooligomer;Protein × 5 PDB declaration: pentameric(5) Consistent with protein count |
Chain A
1–131(131 aa)
Chain B
1–131(131 aa)
Chain F
1–131(131 aa)
Chain H
1–131(131 aa)
Chain I
1–131(131 aa)
|
Not recorded | SO4 SULFATE ION × 2 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;298 K;0.2M Tri-sodium citrate, 2.2M Ammonium sulfate, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 2.80 Å R-free 0.309 |
| 3FZB Crystal structure of the tail terminator protein from phage lambda (gpU-WT) Deposited 2009-01-24 | Assembly 2 Protein homooligomer Homooligomer;Protein × 5 PDB declaration: pentameric(5) Consistent with protein count |
Chain C
1–131(131 aa)
Chain D
1–131(131 aa)
Chain E
1–131(131 aa)
Chain G
1–131(131 aa)
Chain J
1–131(131 aa)
|
Not recorded | SO4 SULFATE ION × 1 | X-RAY DIFFRACTION |
X-ray crystallization conditions
VAPOR DIFFUSION, HANGING DROP;pH 7.5;298 K;0.2M Tri-sodium citrate, 2.2M Ammonium sulfate, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
|
Resolution 2.80 Å R-free 0.309 |
| 8IYD Tail cap of phage lambda tail Deposited 2023-04-04 | Assembly 1 Protein heterocomplex Heteromer;Protein × 30 PDB declaration: 30-meric(30) Consistent with protein count |
Chain G
1–131(131 aa)
Chain K
1–131(131 aa)
Chain Q
1–131(131 aa)
Chain U
1–131(131 aa)
Chain W
1–131(131 aa)
Chain u
1–131(131 aa)
|
Not recorded | No recorded non-water small molecule | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7.5
cryo-EM vitrification conditions
Cryogen NITROGEN
|
Resolution 3.10 Å |
| 8K37 Structure of the bacteriophage lambda neck Deposited 2023-07-14 | Assembly 1 Protein heterocomplex Heteromer;Protein × 18 PDB declaration: octadecameric(18) Consistent with protein count |
Chain A
1–131(131 aa)
Chain B
1–131(131 aa)
Chain C
1–131(131 aa)
Chain D
1–131(131 aa)
Chain E
1–131(131 aa)
Chain F
1–131(131 aa)
|
Not recorded | No recorded non-water small molecule | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7.4
cryo-EM vitrification conditions
Cryogen ETHANE
|
Resolution 3.50 Å |
| 8XOW Mature virion portal of bacteriophage lambda Deposited 2024-01-02 | Assembly 1 Protein heterocomplex Heteromer;Protein × 36 PDB declaration: 36-meric(36) Consistent with protein count |
Chain U
1–131(131 aa)
Chain U1
1–131(131 aa)
Chain U2
1–131(131 aa)
Chain U3
1–131(131 aa)
Chain U4
1–131(131 aa)
Chain U5
1–131(131 aa)
|
Not recorded | No recorded non-water small molecule | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7
cryo-EM vitrification conditions
Cryogen NITROGEN
|
Resolution 3.32 Å |
| 8XPM Mature virion portal of phage lambda with DNA Deposited 2024-01-04 | Assembly 1 Protein–DNA Heteromer;Protein × 66 PDB declaration: 68-meric(68) Consistent with all polymers |
Chain U
1–131(131 aa)
Chain U1
1–131(131 aa)
Chain U2
1–131(131 aa)
Chain U3
1–131(131 aa)
Chain U4
1–131(131 aa)
Chain U5
1–131(131 aa)
|
Not recorded | No recorded non-water small molecule | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7
cryo-EM vitrification conditions
Cryogen NITROGEN
|
Resolution 3.90 Å |
| 8XQB Mature virion portal vertex of bacteriophage lambda Deposited 2024-01-05 | Assembly 1 Protein heterocomplex Heteromer;Protein × 71 PDB declaration: 71-meric(71) Consistent with protein count |
Chain U
1–131(131 aa)
Chain U1
1–131(131 aa)
Chain U2
1–131(131 aa)
Chain U3
1–131(131 aa)
Chain U4
1–131(131 aa)
Chain U5
1–131(131 aa)
|
Not recorded | No recorded non-water small molecule | ELECTRON MICROSCOPY |
cryo-EM buffer
pH 7
cryo-EM vitrification conditions
Cryogen NITROGEN
|
Resolution 4.07 Å |