当前蛋白身份:Q9H2S1 重新检索
本组结构的主要差异维度
构建体不同 突变/修饰不同 组装状态不同 配体/离子不同 实验方法不同 实验环境不同 结构质量指标不同

差异标签只比较当前检索结果;所有PDB和assembly原始记录仍分别保留。

相关结构差异明细

一行代表一个 PDB 条目中的一个 biological assembly;同一蛋白的多个单体会分别列出。

PDB 条目 Assembly / 聚集状态 构建体 突变与修饰 配体、离子与非聚合物 实验方法 实验环境 结构质量
5V02 A positive allosteric modulator binding pocket in SK2 ion channels is shared by Riluzole and CyPPA 提交 2017-02-28 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 B 395–486(92 aa) 片段:UNP residues 395-486
未记录 SO4 SULFATE ION × 2 657 6-(trifluoromethoxy)-1,3-benzothiazol-2-amine × 1 GOL GLYCEROL × 1 CA CALCIUM ION × 2 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;295 K;ammonia sulfate
分辨率 1.78 Å R-free 0.215
5V03 A positive allosteric modulator binding pocket in SK2 ion channels is shared by Riluzole and CyPPA 提交 2017-02-28 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 B 395–486(92 aa) 片段:UNP residues 395-486
未记录 SO4 SULFATE ION × 1 658 N-(4-chlorophenyl)-2-(3,5-dimethyl-1H-pyrazol-1-yl)pyrimidin-4-amine × 1 CA CALCIUM ION × 2 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, HANGING DROP;295 K;ammonia sulfate
分辨率 1.58 Å R-free 0.220
5WBX Structural insights into the potency of SK/IK channel positive modulators 提交 2017-06-29 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 B 395–486(92 aa)
突变:N407A SO4 SULFATE ION × 4 GOL GLYCEROL × 2 CA CALCIUM ION × 2 AJY (3Z)-6-bromo-3-(hydroxyimino)-5-methyl-1,3-dihydro-2H-indol-2-one × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 5.8;293.15 K;0.1 M Sodium itrate tribasic dihydrate 0.5 M Ammonium sulfate 1.5 M Lithium sulfate monohydrate
分辨率 1.90 Å R-free 0.243
5WBX Structural insights into the potency of SK/IK channel positive modulators 提交 2017-06-29 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 B 395–486(92 aa)
突变:N407A SO4 SULFATE ION × 8 GOL GLYCEROL × 4 CA CALCIUM ION × 4 AJY (3Z)-6-bromo-3-(hydroxyimino)-5-methyl-1,3-dihydro-2H-indol-2-one × 2 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 5.8;293.15 K;0.1 M Sodium itrate tribasic dihydrate 0.5 M Ammonium sulfate 1.5 M Lithium sulfate monohydrate
分辨率 1.90 Å R-free 0.243
5WC5 Structural insights into the potency of SK/IK channel positive modulators 提交 2017-06-29 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 B 395–486(92 aa)
突变:N407A SO4 SULFATE ION × 6 GOL GLYCEROL × 1 CA CALCIUM ION × 2 AJV 7-fluoro-3-(hydroxyamino)-2H-indol-2-one × 1 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 5.8;293.15 K;0.1 M Sodium citrate tribasic dihydrate 0.5 M Ammonium sulfate 1.5 M Litium sulfate monohydrate
分辨率 2.30 Å R-free 0.250
5WC5 Structural insights into the potency of SK/IK channel positive modulators 提交 2017-06-29 Assembly 2 蛋白异源复合物 异源复合物;蛋白 × 4 PDB 声明:tetrameric(4) 与蛋白数一致
链 B 395–486(92 aa)
突变:N407A SO4 SULFATE ION × 12 GOL GLYCEROL × 2 CA CALCIUM ION × 4 AJV 7-fluoro-3-(hydroxyamino)-2H-indol-2-one × 2 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 5.8;293.15 K;0.1 M Sodium citrate tribasic dihydrate 0.5 M Ammonium sulfate 1.5 M Litium sulfate monohydrate
分辨率 2.30 Å R-free 0.250
6ALE A V-to-F substitution in SK2 channels causes Ca2+ hypersensitivity and improves locomotion in a C. elegans ALS model 提交 2017-08-07 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 2 PDB 声明:dimeric(2) 与蛋白数一致
链 B 394–486(93 aa) 片段:calmodulin binding domain (UNP residues 394-486)
未记录 SO4 SULFATE ION × 4 1KP (3E)-6,7-dichloro-3-(hydroxyimino)-1,3-dihydro-2H-indol-2-one × 1 GOL GLYCEROL × 1 CA CALCIUM ION × 2 X-RAY DIFFRACTION
X-ray结晶条件 VAPOR DIFFUSION, SITTING DROP;pH 5.6;293.15 K;0.1 M Sodium Citrate Tribasic dehydrate 0.6 M Ammonium sulfate 1.4 M Lithium sulfate monohydrate
分辨率 2.50 Å R-free 0.255
9O48 Cryo-EM structure of the human SK2-4 chimera/calmodulin channel complex in the Ca2+ bound state 提交 2025-04-08 Assembly 1 信息不足 异源复合物;蛋白 × 8 PDB 声明:octameric(8) 与蛋白数一致
链 A 124–412(289 aa) 片段:SK4 residues 1-15 + SK2 residues 124-412 + SK4 residues 306-428
链 B 124–412(289 aa) 片段:SK4 residues 1-15 + SK2 residues 124-412 + SK4 residues 306-428
链 C 124–412(289 aa) 片段:SK4 residues 1-15 + SK2 residues 124-412 + SK4 residues 306-428
链 D 124–412(289 aa) 片段:SK4 residues 1-15 + SK2 residues 124-412 + SK4 residues 306-428
未记录 K POTASSIUM ION × 2 CA CALCIUM ION × 16 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 8;20 mM Tris pH 8, 150 mM KCl, 2 mM CaCl2, 0.005% GDN, 0.0005% CHS
cryo-EM玻璃化条件 冷冻剂 ETHANE;5 uL of sample was applied to grids at 4 degree temperature with 100% humidity. After 30 seconds, grids were blotted for 5 seconds with blot force 25 and plunged into liquid ethane.
分辨率 3.10 Å
9O51 Cryo-EM structure of the human SK2-4 chimera/calmodulin channel complex in the Ca2+ free state 提交 2025-04-09 Assembly 1 信息不足 异源复合物;蛋白 × 8 PDB 声明:octameric(8) 与蛋白数一致
链 A 124–412(289 aa) 片段:SK4 residues 1-15 + SK2 residues 124-412 + SK4 residues 306-428
链 B 124–412(289 aa) 片段:SK4 residues 1-15 + SK2 residues 124-412 + SK4 residues 306-428
链 C 124–412(289 aa) 片段:SK4 residues 1-15 + SK2 residues 124-412 + SK4 residues 306-428
链 D 124–412(289 aa) 片段:SK4 residues 1-15 + SK2 residues 124-412 + SK4 residues 306-428
未记录 K POTASSIUM ION × 2 CA CALCIUM ION × 4 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 8;20 mM Tris pH 8, 150 mM KCl, 5 mM EGTA, 0.005% GDN, 0.0005% CHS
cryo-EM玻璃化条件 冷冻剂 ETHANE;5 uL of sample was applied to grids at 4 degree temperature with 100% humidity. After 30 seconds, grids were blotted for 5 seconds with blot force 25 and plunged into liquid ethane.
分辨率 3.40 Å
9O52 Cryo-EM structure of the human SK2-4 chimera/calmodulin channel complex bound to the bee toxin apamin 提交 2025-04-09 Assembly 1 信息不足 异源复合物;蛋白 × 9 PDB 声明:nonameric(9) 与蛋白数一致
链 A 124–412(289 aa) 片段:SK4 residues 1-15 + SK2 residues 124-412 + SK4 residues 306-428
链 B 124–412(289 aa) 片段:SK4 residues 1-15 + SK2 residues 124-412 + SK4 residues 306-428
链 C 124–412(289 aa) 片段:SK4 residues 1-15 + SK2 residues 124-412 + SK4 residues 306-428
链 D 124–412(289 aa) 片段:SK4 residues 1-15 + SK2 residues 124-412 + SK4 residues 306-428
未记录 K POTASSIUM ION × 4 CA CALCIUM ION × 16 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 8;20 mM Tris pH 8, 150 mM KCl, 2 mM CaCl2, 0.005% GDN, 0.0005% CHS
cryo-EM玻璃化条件 冷冻剂 ETHANE;5 uL of sample was applied to grids at 4 degree temperature with 100% humidity. After 30 seconds, grids were blotted for 5 seconds with blot force 25 and plunged into liquid ethane.
分辨率 3.18 Å
9O53 Cryo-EM structure of the human SK2-4 chimera/calmodulin channel complex bound to a small molecule inhibitor 提交 2025-04-09 Assembly 1 信息不足 异源复合物;蛋白 × 8 PDB 声明:octameric(8) 与蛋白数一致
链 A 124–412(289 aa) 片段:SK4 residues 1-15 + SK2 residues 124-412 + SK4 residues 306-428
链 B 124–412(289 aa) 片段:SK4 residues 1-15 + SK2 residues 124-412 + SK4 residues 306-428
链 C 124–412(289 aa) 片段:SK4 residues 1-15 + SK2 residues 124-412 + SK4 residues 306-428
链 D 124–412(289 aa) 片段:SK4 residues 1-15 + SK2 residues 124-412 + SK4 residues 306-428
未记录 A1B8D N-(2,1,3-benzoxadiazol-4-yl)-3-(4-methoxybenzene-1-sulfonamido)benzamide × 4 K POTASSIUM ION × 4 CA CALCIUM ION × 16 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 8;20 mM Tris pH 8, 150 mM KCl, 2 mM CaCl2, 0.005% GDN, 0.0005% CHS
cryo-EM玻璃化条件 冷冻剂 ETHANE;5 uL of sample was applied to grids at 4 degree temperature with 100% humidity. After 30 seconds, grids were blotted for 5 seconds with blot force 25 and plunged into liquid ethane.
分辨率 3.30 Å
9O5O Cryo-EM structure of the human SK2-4 chimera/calmodulin channel complex bound to a small molecule activator 提交 2025-04-10 Assembly 1 信息不足 异源复合物;蛋白 × 8 PDB 声明:octameric(8) 与蛋白数一致
链 A 124–412(289 aa) 片段:SK4 residues 1-15 + SK2 residues 124-412 + SK4 residues 306-428
链 B 124–412(289 aa) 片段:SK4 residues 1-15 + SK2 residues 124-412 + SK4 residues 306-428
链 C 124–412(289 aa) 片段:SK4 residues 1-15 + SK2 residues 124-412 + SK4 residues 306-428
链 D 124–412(289 aa) 片段:SK4 residues 1-15 + SK2 residues 124-412 + SK4 residues 306-428
未记录 A1B8G N-(2,1,3-benzoxadiazol-4-yl)-4-(trifluoromethyl)benzamide × 4 K POTASSIUM ION × 2 CA CALCIUM ION × 16 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 8;20 mM Tris pH 8, 150 mM KCl, 2 mM CaCl2, 0.005% GDN, 0.0005% CHS
cryo-EM玻璃化条件 冷冻剂 ETHANE;5 uL of sample was applied to grids at 4 degree temperature with 100% humidity. After 30 seconds, grids were blotted for 5 seconds with blot force 25 and plunged into liquid ethane.
分辨率 3.10 Å
9VU9 channel D complex with 4 提交 2025-07-12 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 7 PDB 声明:heptameric(7) 与蛋白数一致
链 A 1–579(579 aa)
链 B 1–579(579 aa)
链 C 1–579(579 aa)
链 D 1–579(579 aa)
未记录 A1ETX (3~{S})-3-(1~{H}-benzimidazol-2-ylamino)-~{N}-(cyanomethyl)-~{N}-methyl-3-[3-(trifluoromethyl)phenyl]propanamide × 1 K POTASSIUM ION × 4 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.5
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 3.34 Å
9VUA channel A complex with 1 提交 2025-07-12 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 8 PDB 声明:octameric(8) 与蛋白数一致
链 A 1–579(579 aa)
链 B 1–579(579 aa)
链 C 1–579(579 aa)
链 D 1–579(579 aa)
未记录 K POTASSIUM ION × 4 POV (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate × 4 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.5
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 3.23 Å
9VUB channel C complex with 3 提交 2025-07-12 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 8 PDB 声明:octameric(8) 与蛋白数一致
链 A 1–579(579 aa)
链 B 1–579(579 aa)
链 C 1–579(579 aa)
链 D 1–579(579 aa)
未记录 POV (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate × 32 CLR CHOLESTEROL × 8 CA CALCIUM ION × 12 A1B92 Rimtuzalcap × 4 K POTASSIUM ION × 3 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.5
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 3.35 Å
9VUC channel B complex with 2 提交 2025-07-12 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 7 PDB 声明:heptameric(7) 与蛋白数一致
链 A 1–579(579 aa)
链 B 1–579(579 aa)
链 C 1–579(579 aa)
链 D 1–579(579 aa)
未记录 K POTASSIUM ION × 4 Y7Z UCL1684 × 1 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 7.5
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 2.96 Å
9ZRQ Cryo-EM structure of KCa2.2/calmodulin channel in complex with SKA31. 提交 2025-12-20 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 8 PDB 声明:octameric(8) 与蛋白数一致
链 A 117–477(361 aa)
链 B 117–477(361 aa)
链 C 117–477(361 aa)
链 D 117–477(361 aa)
未记录 K POTASSIUM ION × 4 A1C3Q naphtho[1,2-d][1,3]thiazol-2-amine × 4 CA CALCIUM ION × 8 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 8
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 2.77 Å
9ZRR Cryo-EM structure of KCa2.2/calmodulin channel in complex with SKA111. 提交 2025-12-20 Assembly 1 蛋白异源复合物 异源复合物;蛋白 × 8 PDB 声明:octameric(8) 与蛋白数一致
链 A 117–477(361 aa)
链 B 117–477(361 aa)
链 C 117–477(361 aa)
链 D 117–477(361 aa)
未记录 K POTASSIUM ION × 2 A1C3U 5-methylnaphtho[1,2-d][1,3]thiazol-2-amine × 4 CA CALCIUM ION × 12 ELECTRON MICROSCOPY
cryo-EM缓冲液 pH 8
cryo-EM玻璃化条件 冷冻剂 ETHANE
分辨率 3.31 Å