← Back to search

1an0

CDC42HS-GDP COMPLEX

Method: X-RAY DIFFRACTION D_max: 90.8 Å Quality: GOOD

SAXS Profile

P(r) Distribution

▼

1. Structure Basics

entry_id	1an0
deposition_date	1997-06-26
title	CDC42HS-GDP COMPLEX
keywords	GTPASE, G-PROTEIN, LIPOPROTEIN, PRENYLATION; GTPASE
method	X-RAY DIFFRACTION

▼

Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

▼

2. SAXS Parameters (CRYSOL)

rg_guinier	27.37 Å
rg_electron	26.93 Å
i0	30340600.00
molecular_weight	42959.0 kDa
excluded_volume	53878 Å³
envelope_volume	69262 Å³
shell_volume	22375 Å³
envelope_diameter	94.7 Å
shell_rg	32.81 Å
envelope_rg	26.76 Å
shape_rg	26.90 Å
total_rg	27.69 Å
total_atoms	2998
n_residues	372
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

▼

3. P(r) Analysis (GNOM)

dmax	90.8 Å
rg_real	27.56 Å
rg_real_error	0.79 Å
i0_real	3.0340e+07
i0_real_error	4.6800e+05
rg_reciprocal	27.51 Å
i0_reciprocal	30340000.0000
total_estimate	0.8521
solution_quality	GOOD a GOOD solution
n_peaks	2
r_peak_primary	23.5 Å
skewness	0.414
kurtosis	-0.562
angular_range	— – 0.2900 Å⁻¹
current_alpha	0.0000
highest_alpha	4593000.0000
n_real_points	59
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.792; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.817; Smooth: 0.880

▶

4. Crystallography & Experiment

▶

5. Entities & Polymer Info (4)

Entity 1 polymer

description	CDC42HS-GDP
formula_weight	21264.2 kDa
src_method	man
entity_count	2

Polymer

type	polypeptide(L)
strand_id	A,B
atom_count	3063

MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKSRRCVL

Source

organism	Homo sapiens
common_name	human
ncbi_taxonomy_id	9606
host_organism	Escherichia coli

Entity 2 non-polymer

description	MAGNESIUM ION
formula_weight	24.3 kDa
src_method	syn
entity_count	2

Entity 3 non-polymer

description	GUANOSINE-5'-DIPHOSPHATE
formula_weight	443.2 kDa
src_method	syn
entity_count	2

Entity 4 water

description	water
formula_weight	18.0 kDa
src_method	nat
entity_count	65

▶

6. Citations (1)

▶

length_a	99.440 Å
length_b	99.440 Å
length_c	102.670 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	16

space_group	P 41 21 2
int_tables_number	92
crystal_system	—

resolution	2.800 Å
resolution_low	8.000 Å
r_factor	0.2280
r_work	0.2280
r_free	0.3440

fit	/app/data/saxs_computation/an/1an0/1an0.fit
pddf	/app/data/pr_computation/an/1an0/1an0.pr.out
profile	/app/data/saxs_computation/an/1an0/1an0.dat

CDC42HS-GDP COMPLEX

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction