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1be3

CYTOCHROME BC1 COMPLEX FROM BOVINE

Method: X-RAY DIFFRACTION D_max: 152.7 Å Quality: GOOD

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	1be3
deposition_date	1998-05-19
title	CYTOCHROME BC1 COMPLEX FROM BOVINE
keywords	ELECTRON TRANSPORT, CYTOCHROME, MEMBRANE PROTEIN; ELECTRON TRANSPORT
method	X-RAY DIFFRACTION

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	50.00 Å
rg_electron	49.79 Å
i0	753364000.00
molecular_weight	230330.0 kDa
excluded_volume	289300 Å³
envelope_volume	418260 Å³
shell_volume	72251 Å³
envelope_diameter	163.6 Å
shell_rg	50.75 Å
envelope_rg	49.29 Å
shape_rg	49.77 Å
total_rg	49.88 Å
total_atoms	16222
n_residues	2049
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	152.7 Å
rg_real	50.38 Å
rg_real_error	1.50 Å
i0_real	7.5340e+08
i0_real_error	1.5020e+07
rg_reciprocal	50.00 Å
i0_reciprocal	753000000.0000
total_estimate	0.8280
solution_quality	GOOD a GOOD solution
n_peaks	1
r_peak_primary	44.3 Å
skewness	0.406
kurtosis	-0.635
angular_range	— – 0.1550 Å⁻¹
current_alpha	0.0000
highest_alpha	68630000.0000
n_real_points	32
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.939; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.943; Smooth: 0.002

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4. Crystallography & Experiment

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5. Entities & Polymer Info (14)

Entity 1 polymer

description	CYTOCHROME BC1 COMPLEX
formula_weight	49266.3 kDa
ec_number	1.10.2.2
src_method	nat
entity_count	1

Polymer

type	polypeptide(L)
strand_id	A
atom_count	16222

TATYAQALQSVPETQVSQLDNGLRVASEQSSQPTCTVGVWIDAGSRYESEKNNGAGYFVEHLAFKGTKNRPGNALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIVQNCSLEDSQIEKERDVILQELQENDTSMRDVVFNYLHATAFQGTPLAQSVEGPSENVRKLSRADLTEYLSRHYKAPRMVLAAAGGLEHRQLLDLAQKHFSGLSGTYDEDAVPTLSPCRFTGSQICHREDGLPLAHVAIAVEGPGWAHPDNVALQVANAIIGHYDCTYGGGAHLSSPLASIAATNKLCQSFQTFNICYADTGLLGAHFVCDHMSIDDMMFVLQGQWMRLCTSATESEVLRGKNLLRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDARVVREVCSKYFYDQCPAVAGFGPIEQLPDYNRIRSGMFWLRF

Entity 2 polymer

description	CYTOCHROME BC1 COMPLEX
formula_weight	46575.5 kDa
ec_number	1.10.2.2
src_method	nat
entity_count	1

Polymer

type	polypeptide(L)
strand_id	B

SLKVAPKVKATEAPAGVPPHPQDLEFTRLPNGLVIASLENYAPASRIGLFIKAGSRYENSNNLGTSHLLRLASSLTTKGASSFKITRGIEAVGGKLSVTSTRENMAYTVECLRDDVDILMEFLLNVTTAPEFRRWEVAALQPQLRIDKAVALQNPQAHVIENLHAAAYRNALANSLYCPDYRIGKVTPVELHDYVQNHFTSARMALIGLGVSHPVLKQVAEQFLNIRGGLGLSGAKAKYHGGEIREQNGDSLVHAALVAESAAIGSAEANAFSVLQHVLGAGPHVKRGSNATSSLYQAVAKGVHQPFDVSAFNASYSDSGLFGFYTISQAASAGDVIKAAYNQVKTIAQGNLSNPDVQAAKNKLKAGYLMSVESSEGFLDEVGSQALAAGSYTPPSTVLQQIDAVADADVINAAKKFVSGRKSMAASGNLGHTPFIDEL

Entity 3 polymer

description	CYTOCHROME BC1 COMPLEX
formula_weight	42620.3 kDa
ec_number	1.10.2.2
src_method	nat
entity_count	1

Polymer

type	polypeptide(L)
strand_id	C

MTNIRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLYMHVGRGLYYGSYTFLETWNIGVILLLTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMAIAMVHLLFLHETGSNNPTGISSDVDKIPFHPYYTIKDILGALLLILALMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILALIPLLHTSKQRSMMFRPLSQCLFWALVADLLTLTWIGGQPVEHPYITIGQLASVLYFLLILVLMPTAGTIENKLLKW

Entity 4 polymer

description	CYTOCHROME BC1 COMPLEX
formula_weight	27323.3 kDa
ec_number	1.10.2.2
src_method	nat
entity_count	1

Polymer

type	polypeptide(L)
strand_id	D

SDLELHPPSYPWSHRGLLSSLDHTSIRRGFQVYKQVCSSCHSMDYVAYRHLVGVCYTEDEAKALAEEVEVQDGPNEDGEMFMRPGKLSDYFPKPYPNPEAARAANNGALPPDLSYIVRARHGGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPGQAIGMAPPIYNEVLEFDDGTPATMSQVAKDVCTFLRWAAEPEHDHRKRMGLKMLLMMGLLLPLVYAMKRHKWSVLKSRKLAYRPPK

Entity 5 polymer

description	CYTOCHROME BC1 COMPLEX
formula_weight	21640.6 kDa
ec_number	1.10.2.2
src_method	nat
entity_count	1

Polymer

type	polypeptide(L)
strand_id	E

SHTDIKVPDFSDYRRPEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPSYEFTSDDMVIVG

Entity 6 polymer

description	CYTOCHROME BC1 COMPLEX
formula_weight	13371.2 kDa
ec_number	1.10.2.2
src_method	nat
entity_count	1

Polymer

type	polypeptide(L)
strand_id	F

AGRPAVSASSRWLEGIRKWYYNAAGFNKLGLMRDDTIHENDDVKEAIRRLPENLYDDRVFRIKRALDLSMRQQILPKEQWTKYEEDKSYLEPYLKEVIRERKEREEWAKK

Entity 7 polymer

description	CYTOCHROME BC1 COMPLEX
formula_weight	9606.0 kDa
ec_number	1.10.2.2
src_method	nat
entity_count	1

Polymer

type	polypeptide(L)
strand_id	G

GRQFGHLTRVRHVITYSLSPFEQRAFPHYFSKGIPNVLRRTRACILRVAPPFVAFYLVYTWGTQEFEKSKRKNPAAYENDR

Entity 8 polymer

description	CYTOCHROME BC1 COMPLEX
formula_weight	9189.1 kDa
ec_number	1.10.2.2
src_method	nat
entity_count	1

Polymer

type	polypeptide(L)
strand_id	H

GDPKEEEEEEEELVDPLTTVREQCEQLEKCVKARERLELCDERVSSRSQTEEDCTEELLDFLHARDHCVAHKLFNSLK

Entity 9 polymer

description	CYTOCHROME BC1 COMPLEX
formula_weight	7964.3 kDa
ec_number	1.10.2.2
src_method	nat
entity_count	1

Polymer

type	polypeptide(L)
strand_id	I

MLSVAARSGPFAPVLSATSRGVAGALRPLVQAAVPATSESPVLDLKRSVLCRESLRGQAAGRPLVASVSLNVPASVRY

Entity 10 polymer

description	CYTOCHROME BC1 COMPLEX
formula_weight	7209.3 kDa
ec_number	1.10.2.2
src_method	nat
entity_count	1

Polymer

type	polypeptide(L)
strand_id	J

VAPTLTARLYSLLFRRTSTFALTIVVGALFFERAFDQGADAIYEHINEGKLWKHIKHKYENK

Entity 11 polymer

description	CYTOCHROME BC1 COMPLEX
formula_weight	6370.4 kDa
ec_number	1.10.2.2
src_method	nat
entity_count	1

Polymer

type	polypeptide(L)
strand_id	K

MLTRFLGPRYRQLARNWVPTAQLWGAVGAVGLVSATDSRLILDWVPYINGKFKKDD

Entity 12 non-polymer

description	PROTOPORPHYRIN IX CONTAINING FE
formula_weight	616.5 kDa
src_method	syn
entity_count	2

Entity 13 non-polymer

description	HEME C
formula_weight	618.5 kDa
src_method	syn
entity_count	1

Entity 14 non-polymer

description	FE2/S2 (INORGANIC) CLUSTER
formula_weight	175.8 kDa
src_method	syn
entity_count	1

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6. Citations (1)

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length_a	211.200 Å
length_b	211.200 Å
length_c	339.280 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	120.00 °
z_pdb	12

space_group	P 65 2 2
int_tables_number	179
crystal_system	—

resolution	3.000 Å
resolution_low	40.000 Å
r_factor	—
r_work	0.2600
r_free	0.3200

fit	/app/data/saxs_computation/be/1be3/1be3.fit
pddf	/app/data/pr_computation/be/1be3/1be3.pr.out
profile	/app/data/saxs_computation/be/1be3/1be3.dat

CYTOCHROME BC1 COMPLEX FROM BOVINE

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

Diffraction

5. Entities & Polymer Info (14)

Entity 1 polymer

Polymer

Entity 2 polymer

Polymer

Entity 3 polymer

Polymer

Entity 4 polymer

Polymer

Entity 5 polymer

Polymer

Entity 6 polymer

Polymer

Entity 7 polymer

Polymer

Entity 8 polymer

Polymer

Entity 9 polymer

Polymer

Entity 10 polymer

Polymer

Entity 11 polymer

Polymer

Entity 12 non-polymer

Entity 13 non-polymer

Entity 14 non-polymer

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)