1l0l

structure of bovine mitochondrial cytochrome bc1 complex with a bound fungicide famoxadone

Method: X-RAY DIFFRACTION
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1. Protein Identity and Related Structures Protein Identity & Related Structures

UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I

OrganismNot specified

UniProt P31800

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 11 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2 × 1 (P23004) Cytochrome B × 1 (P00157) Cytochrome c1, heme protein × 1 (P00125) UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT × 1 (P13272) Ubiquinol-cytochrome C reductase complex 14 kDa protein × 1 (P00129) Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C × 1 (P13271) Ubiquinol-cytochrome C reductase complex 11 kDa protein × 1 (P00126) UBIQUINOL-CYTOCHROME C REDUCTASE 8 KDA PROTEIN × 1 (P13272) Ubiquinol-cytochrome C reductase complex 7.2 kDa protein × 1 (P00130) Ubiquinol-cytochrome C reductase complex 6.4 kDa protein × 1 (P07552) PROTOPORPHYRIN IX CONTAINING FE × 3 FAMOXADONE × 1 FE2/S2 (INORGANIC) CLUSTER × 1 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 22 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2 × 2 (P23004) Cytochrome B × 2 (P00157) Cytochrome c1, heme protein × 2 (P00125) UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT × 2 (P13272) Ubiquinol-cytochrome C reductase complex 14 kDa protein × 2 (P00129) Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C × 2 (P13271) Ubiquinol-cytochrome C reductase complex 11 kDa protein × 2 (P00126) UBIQUINOL-CYTOCHROME C REDUCTASE 8 KDA PROTEIN × 2 (P13272) Ubiquinol-cytochrome C reductase complex 7.2 kDa protein × 2 (P00130) Ubiquinol-cytochrome C reductase complex 6.4 kDa protein × 2 (P07552) PROTOPORPHYRIN IX CONTAINING FE × 6 FAMOXADONE × 2 FE2/S2 (INORGANIC) CLUSTER × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name UQCR1_BOVIN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–446; UniProt 35–480

UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2

OrganismNot specified

UniProt P23004

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 11 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I × 1 (P31800) Cytochrome B × 1 (P00157) Cytochrome c1, heme protein × 1 (P00125) UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT × 1 (P13272) Ubiquinol-cytochrome C reductase complex 14 kDa protein × 1 (P00129) Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C × 1 (P13271) Ubiquinol-cytochrome C reductase complex 11 kDa protein × 1 (P00126) UBIQUINOL-CYTOCHROME C REDUCTASE 8 KDA PROTEIN × 1 (P13272) Ubiquinol-cytochrome C reductase complex 7.2 kDa protein × 1 (P00130) Ubiquinol-cytochrome C reductase complex 6.4 kDa protein × 1 (P07552) PROTOPORPHYRIN IX CONTAINING FE × 3 FAMOXADONE × 1 FE2/S2 (INORGANIC) CLUSTER × 1 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 22 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I × 2 (P31800) Cytochrome B × 2 (P00157) Cytochrome c1, heme protein × 2 (P00125) UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT × 2 (P13272) Ubiquinol-cytochrome C reductase complex 14 kDa protein × 2 (P00129) Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C × 2 (P13271) Ubiquinol-cytochrome C reductase complex 11 kDa protein × 2 (P00126) UBIQUINOL-CYTOCHROME C REDUCTASE 8 KDA PROTEIN × 2 (P13272) Ubiquinol-cytochrome C reductase complex 7.2 kDa protein × 2 (P00130) Ubiquinol-cytochrome C reductase complex 6.4 kDa protein × 2 (P07552) PROTOPORPHYRIN IX CONTAINING FE × 6 FAMOXADONE × 2 FE2/S2 (INORGANIC) CLUSTER × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name UQCR2_BOVIN
Isoform —
PDB entities 2
Chains and sequence ranges Author chain B; PDBConstruct 1–439; UniProt 15–453

Cytochrome B

OrganismNot specified

UniProt P00157

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 11 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I × 1 (P31800) UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2 × 1 (P23004) Cytochrome c1, heme protein × 1 (P00125) UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT × 1 (P13272) Ubiquinol-cytochrome C reductase complex 14 kDa protein × 1 (P00129) Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C × 1 (P13271) Ubiquinol-cytochrome C reductase complex 11 kDa protein × 1 (P00126) UBIQUINOL-CYTOCHROME C REDUCTASE 8 KDA PROTEIN × 1 (P13272) Ubiquinol-cytochrome C reductase complex 7.2 kDa protein × 1 (P00130) Ubiquinol-cytochrome C reductase complex 6.4 kDa protein × 1 (P07552) PROTOPORPHYRIN IX CONTAINING FE × 3 FAMOXADONE × 1 FE2/S2 (INORGANIC) CLUSTER × 1 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 22 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I × 2 (P31800) UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2 × 2 (P23004) Cytochrome c1, heme protein × 2 (P00125) UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT × 2 (P13272) Ubiquinol-cytochrome C reductase complex 14 kDa protein × 2 (P00129) Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C × 2 (P13271) Ubiquinol-cytochrome C reductase complex 11 kDa protein × 2 (P00126) UBIQUINOL-CYTOCHROME C REDUCTASE 8 KDA PROTEIN × 2 (P13272) Ubiquinol-cytochrome C reductase complex 7.2 kDa protein × 2 (P00130) Ubiquinol-cytochrome C reductase complex 6.4 kDa protein × 2 (P07552) PROTOPORPHYRIN IX CONTAINING FE × 6 FAMOXADONE × 2 FE2/S2 (INORGANIC) CLUSTER × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CYB_BOVIN
Isoform —
PDB entities 3
Chains and sequence ranges Author chain C; PDBConstruct 1–379; UniProt 1–379

Cytochrome c1, heme protein

OrganismNot specified

UniProt P00125

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 11 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I × 1 (P31800) UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2 × 1 (P23004) Cytochrome B × 1 (P00157) UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT × 1 (P13272) Ubiquinol-cytochrome C reductase complex 14 kDa protein × 1 (P00129) Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C × 1 (P13271) Ubiquinol-cytochrome C reductase complex 11 kDa protein × 1 (P00126) UBIQUINOL-CYTOCHROME C REDUCTASE 8 KDA PROTEIN × 1 (P13272) Ubiquinol-cytochrome C reductase complex 7.2 kDa protein × 1 (P00130) Ubiquinol-cytochrome C reductase complex 6.4 kDa protein × 1 (P07552) PROTOPORPHYRIN IX CONTAINING FE × 3 FAMOXADONE × 1 FE2/S2 (INORGANIC) CLUSTER × 1 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 22 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I × 2 (P31800) UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2 × 2 (P23004) Cytochrome B × 2 (P00157) UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT × 2 (P13272) Ubiquinol-cytochrome C reductase complex 14 kDa protein × 2 (P00129) Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C × 2 (P13271) Ubiquinol-cytochrome C reductase complex 11 kDa protein × 2 (P00126) UBIQUINOL-CYTOCHROME C REDUCTASE 8 KDA PROTEIN × 2 (P13272) Ubiquinol-cytochrome C reductase complex 7.2 kDa protein × 2 (P00130) Ubiquinol-cytochrome C reductase complex 6.4 kDa protein × 2 (P07552) PROTOPORPHYRIN IX CONTAINING FE × 6 FAMOXADONE × 2 FE2/S2 (INORGANIC) CLUSTER × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name CY1_BOVIN
Isoform —
PDB entities 4
Chains and sequence ranges Author chain D; PDBConstruct 1–241; UniProt 1–241

UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT

OrganismNot specified

UniProt P13272

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 11 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I × 1 (P31800) UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2 × 1 (P23004) Cytochrome B × 1 (P00157) Cytochrome c1, heme protein × 1 (P00125) Ubiquinol-cytochrome C reductase complex 14 kDa protein × 1 (P00129) Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C × 1 (P13271) Ubiquinol-cytochrome C reductase complex 11 kDa protein × 1 (P00126) Ubiquinol-cytochrome C reductase complex 7.2 kDa protein × 1 (P00130) Ubiquinol-cytochrome C reductase complex 6.4 kDa protein × 1 (P07552) PROTOPORPHYRIN IX CONTAINING FE × 3 FAMOXADONE × 1 FE2/S2 (INORGANIC) CLUSTER × 1 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 22 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I × 2 (P31800) UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2 × 2 (P23004) Cytochrome B × 2 (P00157) Cytochrome c1, heme protein × 2 (P00125) Ubiquinol-cytochrome C reductase complex 14 kDa protein × 2 (P00129) Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C × 2 (P13271) Ubiquinol-cytochrome C reductase complex 11 kDa protein × 2 (P00126) Ubiquinol-cytochrome C reductase complex 7.2 kDa protein × 2 (P00130) Ubiquinol-cytochrome C reductase complex 6.4 kDa protein × 2 (P07552) PROTOPORPHYRIN IX CONTAINING FE × 6 FAMOXADONE × 2 FE2/S2 (INORGANIC) CLUSTER × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name UCRI_BOVIN
Isoform —
PDB entities 5, 9
Chains and sequence ranges Author chain E; PDBConstruct 1–196; UniProt 79–274 Author chain I; PDBConstruct 1–78; UniProt 1–78

Ubiquinol-cytochrome C reductase complex 14 kDa protein

OrganismNot specified

UniProt P00129

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 11 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I × 1 (P31800) UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2 × 1 (P23004) Cytochrome B × 1 (P00157) Cytochrome c1, heme protein × 1 (P00125) UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT × 1 (P13272) Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C × 1 (P13271) Ubiquinol-cytochrome C reductase complex 11 kDa protein × 1 (P00126) UBIQUINOL-CYTOCHROME C REDUCTASE 8 KDA PROTEIN × 1 (P13272) Ubiquinol-cytochrome C reductase complex 7.2 kDa protein × 1 (P00130) Ubiquinol-cytochrome C reductase complex 6.4 kDa protein × 1 (P07552) PROTOPORPHYRIN IX CONTAINING FE × 3 FAMOXADONE × 1 FE2/S2 (INORGANIC) CLUSTER × 1 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 22 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I × 2 (P31800) UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2 × 2 (P23004) Cytochrome B × 2 (P00157) Cytochrome c1, heme protein × 2 (P00125) UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT × 2 (P13272) Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C × 2 (P13271) Ubiquinol-cytochrome C reductase complex 11 kDa protein × 2 (P00126) UBIQUINOL-CYTOCHROME C REDUCTASE 8 KDA PROTEIN × 2 (P13272) Ubiquinol-cytochrome C reductase complex 7.2 kDa protein × 2 (P00130) Ubiquinol-cytochrome C reductase complex 6.4 kDa protein × 2 (P07552) PROTOPORPHYRIN IX CONTAINING FE × 6 FAMOXADONE × 2 FE2/S2 (INORGANIC) CLUSTER × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name UCR6_BOVIN
Isoform —
PDB entities 6
Chains and sequence ranges Author chain F; PDBConstruct 1–110; UniProt 1–110

Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C

OrganismNot specified

UniProt P13271

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 11 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I × 1 (P31800) UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2 × 1 (P23004) Cytochrome B × 1 (P00157) Cytochrome c1, heme protein × 1 (P00125) UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT × 1 (P13272) Ubiquinol-cytochrome C reductase complex 14 kDa protein × 1 (P00129) Ubiquinol-cytochrome C reductase complex 11 kDa protein × 1 (P00126) UBIQUINOL-CYTOCHROME C REDUCTASE 8 KDA PROTEIN × 1 (P13272) Ubiquinol-cytochrome C reductase complex 7.2 kDa protein × 1 (P00130) Ubiquinol-cytochrome C reductase complex 6.4 kDa protein × 1 (P07552) PROTOPORPHYRIN IX CONTAINING FE × 3 FAMOXADONE × 1 FE2/S2 (INORGANIC) CLUSTER × 1 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 22 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I × 2 (P31800) UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2 × 2 (P23004) Cytochrome B × 2 (P00157) Cytochrome c1, heme protein × 2 (P00125) UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT × 2 (P13272) Ubiquinol-cytochrome C reductase complex 14 kDa protein × 2 (P00129) Ubiquinol-cytochrome C reductase complex 11 kDa protein × 2 (P00126) UBIQUINOL-CYTOCHROME C REDUCTASE 8 KDA PROTEIN × 2 (P13272) Ubiquinol-cytochrome C reductase complex 7.2 kDa protein × 2 (P00130) Ubiquinol-cytochrome C reductase complex 6.4 kDa protein × 2 (P07552) PROTOPORPHYRIN IX CONTAINING FE × 6 FAMOXADONE × 2 FE2/S2 (INORGANIC) CLUSTER × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name UCRQ_BOVIN
Isoform —
PDB entities 7
Chains and sequence ranges Author chain G; PDBConstruct 1–81; UniProt 1–81

Ubiquinol-cytochrome C reductase complex 11 kDa protein

OrganismNot specified

UniProt P00126

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 11 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I × 1 (P31800) UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2 × 1 (P23004) Cytochrome B × 1 (P00157) Cytochrome c1, heme protein × 1 (P00125) UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT × 1 (P13272) Ubiquinol-cytochrome C reductase complex 14 kDa protein × 1 (P00129) Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C × 1 (P13271) UBIQUINOL-CYTOCHROME C REDUCTASE 8 KDA PROTEIN × 1 (P13272) Ubiquinol-cytochrome C reductase complex 7.2 kDa protein × 1 (P00130) Ubiquinol-cytochrome C reductase complex 6.4 kDa protein × 1 (P07552) PROTOPORPHYRIN IX CONTAINING FE × 3 FAMOXADONE × 1 FE2/S2 (INORGANIC) CLUSTER × 1 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 22 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I × 2 (P31800) UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2 × 2 (P23004) Cytochrome B × 2 (P00157) Cytochrome c1, heme protein × 2 (P00125) UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT × 2 (P13272) Ubiquinol-cytochrome C reductase complex 14 kDa protein × 2 (P00129) Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C × 2 (P13271) UBIQUINOL-CYTOCHROME C REDUCTASE 8 KDA PROTEIN × 2 (P13272) Ubiquinol-cytochrome C reductase complex 7.2 kDa protein × 2 (P00130) Ubiquinol-cytochrome C reductase complex 6.4 kDa protein × 2 (P07552) PROTOPORPHYRIN IX CONTAINING FE × 6 FAMOXADONE × 2 FE2/S2 (INORGANIC) CLUSTER × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name UCRH_BOVIN
Isoform —
PDB entities 8
Chains and sequence ranges Author chain H; PDBConstruct 1–78; UniProt 1–78

Ubiquinol-cytochrome C reductase complex 7.2 kDa protein

OrganismNot specified

UniProt P00130

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 11 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I × 1 (P31800) UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2 × 1 (P23004) Cytochrome B × 1 (P00157) Cytochrome c1, heme protein × 1 (P00125) UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT × 1 (P13272) Ubiquinol-cytochrome C reductase complex 14 kDa protein × 1 (P00129) Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C × 1 (P13271) Ubiquinol-cytochrome C reductase complex 11 kDa protein × 1 (P00126) UBIQUINOL-CYTOCHROME C REDUCTASE 8 KDA PROTEIN × 1 (P13272) Ubiquinol-cytochrome C reductase complex 6.4 kDa protein × 1 (P07552) PROTOPORPHYRIN IX CONTAINING FE × 3 FAMOXADONE × 1 FE2/S2 (INORGANIC) CLUSTER × 1 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 22 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I × 2 (P31800) UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2 × 2 (P23004) Cytochrome B × 2 (P00157) Cytochrome c1, heme protein × 2 (P00125) UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT × 2 (P13272) Ubiquinol-cytochrome C reductase complex 14 kDa protein × 2 (P00129) Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C × 2 (P13271) Ubiquinol-cytochrome C reductase complex 11 kDa protein × 2 (P00126) UBIQUINOL-CYTOCHROME C REDUCTASE 8 KDA PROTEIN × 2 (P13272) Ubiquinol-cytochrome C reductase complex 6.4 kDa protein × 2 (P07552) PROTOPORPHYRIN IX CONTAINING FE × 6 FAMOXADONE × 2 FE2/S2 (INORGANIC) CLUSTER × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name UCR10_BOVIN
Isoform —
PDB entities 10
Chains and sequence ranges Author chain J; PDBConstruct 1–62; UniProt 1–62

Ubiquinol-cytochrome C reductase complex 6.4 kDa protein

OrganismNot specified

UniProt P07552

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein heterocomplex Heteromer Protein 11 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I × 1 (P31800) UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2 × 1 (P23004) Cytochrome B × 1 (P00157) Cytochrome c1, heme protein × 1 (P00125) UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT × 1 (P13272) Ubiquinol-cytochrome C reductase complex 14 kDa protein × 1 (P00129) Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C × 1 (P13271) Ubiquinol-cytochrome C reductase complex 11 kDa protein × 1 (P00126) UBIQUINOL-CYTOCHROME C REDUCTASE 8 KDA PROTEIN × 1 (P13272) Ubiquinol-cytochrome C reductase complex 7.2 kDa protein × 1 (P00130) PROTOPORPHYRIN IX CONTAINING FE × 3 FAMOXADONE × 1 FE2/S2 (INORGANIC) CLUSTER × 1 Consistent with protein count
2 Protein heterocomplex Heteromer Protein 22 UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I × 2 (P31800) UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2 × 2 (P23004) Cytochrome B × 2 (P00157) Cytochrome c1, heme protein × 2 (P00125) UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT × 2 (P13272) Ubiquinol-cytochrome C reductase complex 14 kDa protein × 2 (P00129) Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C × 2 (P13271) Ubiquinol-cytochrome C reductase complex 11 kDa protein × 2 (P00126) UBIQUINOL-CYTOCHROME C REDUCTASE 8 KDA PROTEIN × 2 (P13272) Ubiquinol-cytochrome C reductase complex 7.2 kDa protein × 2 (P00130) PROTOPORPHYRIN IX CONTAINING FE × 6 FAMOXADONE × 2 FE2/S2 (INORGANIC) CLUSTER × 2 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name UCR11_BOVIN
Isoform —
PDB entities 11
Chains and sequence ranges Author chain K; PDBConstruct 1–56; UniProt 1–56

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id1l0l
Deposition date deposition_date2002-02-11
Structure title titlestructure of bovine mitochondrial cytochrome bc1 complex with a bound fungicide famoxadone
Keywords keywords;cytochrome bc1, membrane protein, heme protein, iron sulfur protein, cytochrome b, cytochrome c1, mitochondrial processing protease, mpp, OXIDOREDUCTASE ;; OXIDOREDUCTASE
Experimental Method methodX-RAY DIFFRACTION
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

1l0l__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

1l0l__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

1l0l__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)49.92 Å
Rg (electron density)49.67 Å
Total Rg49.76 Å
Atom count16795
Residues2118
Excluded volume299540 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 1l0l__assembly_1__model_1 undecameric (11) Success 4.1.3-1-20251215 (887e7ef) View Download
2 1 1l0l__assembly_2__model_1 22-meric (22) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (14)

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6. Fold Classification (SCOP + CATH) 31 domains

SCOP 2.08 (16 domains)

Domain ID domain_idd1l0la1
Class classd — Alpha and beta proteins (a+b)
Fold Fold foldd.185 — LuxS/MPP-like metallohydrolase
Superfamily Superfamily superfamilyd.185.1 — LuxS/MPP-like metallohydrolase
Family Family familyd.185.1.1 — MPP-like
Domain ID domain_idd1l0la2
Class classd — Alpha and beta proteins (a+b)
Fold Fold foldd.185 — LuxS/MPP-like metallohydrolase
Superfamily Superfamily superfamilyd.185.1 — LuxS/MPP-like metallohydrolase
Family Family familyd.185.1.1 — MPP-like
Domain ID domain_idd1l0lb1
Class classd — Alpha and beta proteins (a+b)
Fold Fold foldd.185 — LuxS/MPP-like metallohydrolase
Superfamily Superfamily superfamilyd.185.1 — LuxS/MPP-like metallohydrolase
Family Family familyd.185.1.1 — MPP-like
Domain ID domain_idd1l0lb2
Class classd — Alpha and beta proteins (a+b)
Fold Fold foldd.185 — LuxS/MPP-like metallohydrolase
Superfamily Superfamily superfamilyd.185.1 — LuxS/MPP-like metallohydrolase
Family Family familyd.185.1.1 — MPP-like
Domain ID domain_idd1l0lc1
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.32 — a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Superfamily Superfamily superfamilyf.32.1 — a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Family Family familyf.32.1.1 — a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Domain ID domain_idd1l0lc2
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.21 — Heme-binding four-helical bundle
Superfamily Superfamily superfamilyf.21.1 — Transmembrane di-heme cytochromes
Family Family familyf.21.1.2 — Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Domain ID domain_idd1l0ld1
Class classa — All alpha proteins
Fold Fold folda.3 — Cytochrome c
Superfamily Superfamily superfamilya.3.1 — Cytochrome c
Family Family familya.3.1.3 — Cytochrome bc1 domain
Domain ID domain_idd1l0ld2
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.23 — Single transmembrane helix
Superfamily Superfamily superfamilyf.23.11 — Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
Family Family familyf.23.11.1 — Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor
Domain ID domain_idd1l0le1
Class classb — All beta proteins
Fold Fold foldb.33 — ISP domain
Superfamily Superfamily superfamilyb.33.1 — ISP domain
Family Family familyb.33.1.1 — Rieske iron-sulfur protein (ISP)
Domain ID domain_idd1l0le2
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.23 — Single transmembrane helix
Superfamily Superfamily superfamilyf.23.12 — ISP transmembrane anchor
Family Family familyf.23.12.1 — ISP transmembrane anchor
Domain ID domain_idd1l0lf_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.27 — 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Superfamily Superfamily superfamilyf.27.1 — 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Family Family familyf.27.1.1 — 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Domain ID domain_idd1l0lg_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.23 — Single transmembrane helix
Superfamily Superfamily superfamilyf.23.13 — Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Family Family familyf.23.13.1 — Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Domain ID domain_idd1l0lh_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.28 — Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Superfamily Superfamily superfamilyf.28.1 — Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Family Family familyf.28.1.1 — Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Domain ID domain_idd1l0li_
Class classd — Alpha and beta proteins (a+b)
Fold Fold foldd.184 — Non-globular alpha+beta subunits of globular proteins
Superfamily Superfamily superfamilyd.184.1 — Non-globular alpha+beta subunits of globular proteins
Family Family familyd.184.1.3 — Ubiquinol-cytochrome c reductase 8 kDa protein
Domain ID domain_idd1l0lj_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.23 — Single transmembrane helix
Superfamily Superfamily superfamilyf.23.14 — Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Family Family familyf.23.14.1 — Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Domain ID domain_idd1l0lk_
Class classf — Membrane and cell surface proteins and peptides
Fold Fold foldf.23 — Single transmembrane helix
Superfamily Superfamily superfamilyf.23.15 — Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
Family Family familyf.23.15.1 — Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)

CATH v4.4 (15 domains)

Domain ID domain_id1l0lA01
Class class3 — Alpha Beta
Architecture architecture30 — 2-Layer Sandwich
Topology topology830 — Cytochrome Bc1 Complex; Chain A, domain 1
Homologous superfamily homologous superfamily10 — Metalloenzyme, LuxS/M16 peptidase-like
Domain ID domain_id1l0lA02
Class class3 — Alpha Beta
Architecture architecture30 — 2-Layer Sandwich
Topology topology830 — Cytochrome Bc1 Complex; Chain A, domain 1
Homologous superfamily homologous superfamily10 — Metalloenzyme, LuxS/M16 peptidase-like
Domain ID domain_id1l0lB01
Class class3 — Alpha Beta
Architecture architecture30 — 2-Layer Sandwich
Topology topology830 — Cytochrome Bc1 Complex; Chain A, domain 1
Homologous superfamily homologous superfamily10 — Metalloenzyme, LuxS/M16 peptidase-like
Domain ID domain_id1l0lB02
Class class3 — Alpha Beta
Architecture architecture30 — 2-Layer Sandwich
Topology topology830 — Cytochrome Bc1 Complex; Chain A, domain 1
Homologous superfamily homologous superfamily10 — Metalloenzyme, LuxS/M16 peptidase-like
Domain ID domain_id1l0lC00
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology810 — Cytochrome Bc1 Complex; Chain C
Homologous superfamily homologous superfamily10 — Cytochrome Bc1 Complex; Chain C
Domain ID domain_id1l0lD01
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology5 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces
Homologous superfamily homologous superfamily100 — Cytochrome c1, transmembrane anchor, C-terminal
Domain ID domain_id1l0lD02
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology760 — Cytochrome Bc1 Complex; Chain D, domain 2
Homologous superfamily homologous superfamily10 — Cytochrome c-like domain
Domain ID domain_id1l0lE01
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology5 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces
Homologous superfamily homologous superfamily270 — Ubiquinol cytochrome reductase, transmembrane domain
Domain ID domain_id1l0lE02
Class class2 — Mainly Beta
Architecture architecture102 — 3-layer Sandwich
Topology topology10 — Rieske Iron-sulfur Protein
Homologous superfamily homologous superfamily10 — Rieske [2Fe-2S] iron-sulphur domain
Domain ID domain_id1l0lF00
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology1090 — Cytochrome Bc1 Complex; Chain F
Homologous superfamily homologous superfamily10 — Cytochrome b-c1 complex subunit 7
Domain ID domain_id1l0lG00
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology5 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces
Homologous superfamily homologous superfamily210 — Cytochrome b-c1 complex subunit 8
Domain ID domain_id1l0lH00
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology287 — Helix Hairpins
Homologous superfamily homologous superfamily20 — Ubiquinol-cytochrome C reductase hinge domain
Domain ID domain_id1l0lI00
Class class2 — Mainly Beta
Architecture architecture10 — Ribbon
Topology topology210 — Cytochrome Bc1 Complex; Chain I
Homologous superfamily homologous superfamily10 — Cytochrome Bc1 Complex; Chain I
Domain ID domain_id1l0lJ00
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology5 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces
Homologous superfamily homologous superfamily260 — Cytochrome b-c1 complex subunit 9
Domain ID domain_id1l0lK00
Class class1 — Mainly Alpha
Architecture architecture20 — Up-down Bundle
Topology topology5 — Single alpha-helices involved in coiled-coils or other helix-helix interfaces
Homologous superfamily homologous superfamily220 —
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7. Citations (1)