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1s6v

Structure of a cytochrome c peroxidase-cytochrome c site specific cross-link

Method: X-RAY DIFFRACTION Dmax: 99.1 Å Quality: GOOD
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Cytochrome c peroxidase, mitochondrial

Saccharomyces cerevisiae

UniProt P00431

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 2 PDB declaration: dimeric（2） Consistent with protein copy count Chain A； UniProt 68–361 Mutation：C128A, V197C Cytochrome c, iso-1 × 1 （P00044） IOD IODIDE ION × 1 HEC HEME C × 2 X-RAY DIFFRACTION X-ray crystallization conditions：VAPOR DIFFUSION, SITTING DROP；298 K；PEG 3350, KI, VAPOR DIFFUSION, SITTING DROP, temperature 298K Resolution 1.88 Å R-free 0.243
2 Protein heterocomplex Heteromer Protein × 2 PDB declaration: dimeric（2） Consistent with protein copy count Chain C； UniProt 68–361 Mutation：C128A, V197C Cytochrome c, iso-1 × 1 （P00044） HEC HEME C × 2 X-RAY DIFFRACTION X-ray crystallization conditions：VAPOR DIFFUSION, SITTING DROP；298 K；PEG 3350, KI, VAPOR DIFFUSION, SITTING DROP, temperature 298K Resolution 1.88 Å R-free 0.243

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 1S6V Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
1A2F PROBING THE STRENGTH AND CHARACTER OF AN ASP-HIS-X HYDROGEN BOND BY INTRODUCING BURIED CHARGES Deposited 1998-01-02 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：M172K HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions dialysis；DIALYSIS AGAINST DISTILLED WATER, dialysis
Resolution 2.10 Å
1A2G PROBING THE STRENGTH AND CHARACTER OF AN ASP-HIS-X HYDROGEN BOND BY INTRODUCING BURIED CHARGES Deposited 1998-01-02 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：M231H HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions dialysis；DIALYSIS AGAINST DISTILLED WATER, dialysis
Resolution 2.10 Å
1AA4 SPECIFICITY OF LIGAND BINDING IN A BURIED POLAR CAVITY OF CYTOCHROME C PEROXIDASE Deposited 1997-01-22 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：T1M, T2K, P3T, W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；20% MPD, 40 MM PHOSPHATE PH 6.0
Resolution 2.10 Å
1AC4 VARIATION IN THE STRENGTH OF A CH TO O HYDROGEN BOND IN AN ARTIFICIAL PROTEIN CAVITY (2,3,4-TRIMETHYL-1,3-THIAZOLE) Deposited 1997-02-12 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 TMT 2,3,4-TRIMETHYL-1,3-THIAZOLE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；20% MPD, 40 MM PHOSPHATE PH 6.0. A SINGLE CRYSTAL OF W191G WAS SOAKED IN 50MM 2,3,4-TRIMETHYLTHIAZOLE IN 40% MPD AND 60 MM PHOSPHATE AT PH 4.5.
Resolution 2.10 Å
1AC8 VARIATION IN THE STRENGTH OF A CH TO O HYDROGEN BOND IN AN ARTIFICIAL PROTEIN CAVITY (3,4,5-TRIMETHYLTHIAZOLE) Deposited 1997-02-14 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 TMZ 3,4,5-TRIMETHYL-1,3-THIAZOLE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；20% MPD, 40 MM PHOSPHATE PH 6.0. A SINGLE CRYSTAL OF W191G WAS SOAKED IN 50MM 3,4,5-TRIMETHYLTHIAZOLE IN 40% MPD AND 60 MM PHOSPHATE AT PH 4.5.
Resolution 2.10 Å
1AEB SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (3-METHYLTHIAZOLE) Deposited 1997-02-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 3MT 3-METHYLTHIAZOLIUM ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；20% MPD, 40 MM PHOSPHATE PH 6.0. A SINGLE CRYSTAL OF W191G WAS SOAKED IN 50MM 3-METHYLTHIAZOLIUM IODIDE IN 40% MPD AND 60 MM PHOSPHATE AT PH 4.5.
Resolution 2.10 Å
1AED SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (3,4-DIMETHYLTHIAZOLE) Deposited 1997-02-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 DTI 3,4-DIMETHYLTHIAZOLIUM ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；20% MPD, 40 MM PHOSPHATE PH 6.0. A SINGLE CRYSTAL OF W191G WAS SOAKED IN 50MM 3,4-DIMETHYLTHIAZOLIUM IODIDE IN 40% MPD AND 60 MM PHOSPHATE AT PH 4.5.
Resolution 2.10 Å
1AEE SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (ANILINE) Deposited 1997-02-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 ANL ANILINE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；20% MPD, 40 MM PHOSPHATE PH 6.0. A SINGLE CRYSTAL OF W191G WAS SOAKED IN 50MM ANILINE IN 40% MPD AND 60 MM PHOSPHATE AT PH 4.5.
Resolution 2.10 Å
1AEF SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (3-AMINOPYRIDINE) Deposited 1997-02-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 3AP 3-AMINOPYRIDINE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；20% MPD, 40 MM PHOSPHATE PH 6.0. A SINGLE CRYSTAL OF W191G WAS SOAKED IN 50MM 3-AMINOPYRIDINE IN 40% MPD AND 60 MM PHOSPHATE AT PH 4.5.
Resolution 2.10 Å
1AEG SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (4-AMINOPYRIDINE) Deposited 1997-02-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 4AP 4-AMINOPYRIDINE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；20% MPD, 40 MM PHOSPHATE PH 6.0. A SINGLE CRYSTAL OF W191G WAS SOAKED IN 50MM 4-AMINOPYRIDINE IN 40% MPD AND 60 MM PHOSPHATE AT PH 4.5.
Resolution 2.10 Å
1AEH SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (2-AMINO-4-METHYLTHIAZOLE) Deposited 1997-02-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 24T 2-AMINO-4-METHYLTHIAZOLE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；20% MPD, 40 MM PHOSPHATE PH 6.0. A SINGLE CRYSTAL OF W191G WAS SOAKED IN 50MM 2-AMINO-4-METHYLTHIAZOLE IN 40% MPD AND 60 MM PHOSPHATE AT PH 4.5.
Resolution 2.10 Å
1AEJ SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (1-VINYLIMIDAZOLE) Deposited 1997-02-25 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 NVI 1-VINYLIMIDAZOLE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；20% MPD, 40 MM PHOSPHATE PH 6.0. A SINGLE CRYSTAL OF W191G WAS SOAKED IN 50MM 1-VINYLIMIDAZOLE, 5MM ETHANOL, IN 40% MPD AND 60 MM PHOSPHATE AT PH 4.5.
Resolution 2.10 Å
1AEK SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (INDOLINE) Deposited 1997-02-25 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 IDM INDOLINE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；20% MPD, 40 MM PHOSPHATE PH 6.0. A SINGLE CRYSTAL OF W191G WAS SOAKED IN 50MM INDOLINE, 10MM ETHANOL, IN 40% MPD AND 60 MM PHOSPHATE AT PH 4.5.
Resolution 2.10 Å
1AEM SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (IMIDAZO[1,2-A]PYRIDINE) Deposited 1997-02-25 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 MPI IMIDAZO[1,2-A]PYRIDINE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；20% MPD, 40 MM PHOSPHATE PH 6.0. A SINGLE CRYSTAL OF W191G WAS SOAKED IN 50MM IMIDAZO[1,2-A]PYRIDINE, 10MM ETHANOL, IN 40% MPD AND 60 MM PHOSPHATE AT PH 4.5.
Resolution 2.10 Å
1AEN SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (2-AMINO-5-METHYLTHIAZOLE) Deposited 1997-02-25 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 25T 2-AMINO-5-METHYLTHIAZOLE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；20% MPD, 40 MM PHOSPHATE PH 6.0. A SINGLE CRYSTAL OF W191G WAS SOAKED IN 50MM 3,4,5-TRIMETHYLTHIAZOLE IN 40% MPD AND 60 MM PHOSPHATE AT PH 4.5.
Resolution 2.10 Å
1AEO SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (2-AMINOPYRIDINE) Deposited 1997-02-25 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 2AP 2-AMINOPYRIDINE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；20% MPD, 40 MM PHOSPHATE PH 6.0. A SINGLE CRYSTAL OF W191G WAS SOAKED IN 50MM 2-AMINOPYRIDINE IN 40% MPD AND 60 MM PHOSPHATE AT PH 4.5.
Resolution 2.10 Å
1AEQ VARIATION IN THE STRENGTH OF A CH TO O HYDROGEN BOND IN AN ARTIFICIAL PROTEIN CAVITY (2-ETHYLIMIDAZOLE) Deposited 1997-02-25 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 2EZ 2-ETHYLIMIDAZOLE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；20% MPD, 40 MM PHOSPHATE PH 6.0. A SINGLE CRYSTAL OF W191G WAS SOAKED IN 50MM 2-ETHYLIMIDAZOLE IN 40% MPD AND 60 MM PHOSPHATE AT PH 4.5.
Resolution 2.10 Å
1AES SPECIFICITY OF LIGAND BINDING TO A BURIED POLAR CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE (IMIDAZOLE) Deposited 1997-02-25 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 IMD IMIDAZOLE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；20% MPD, 40 MM PHOSPHATE PH 6.0. A SINGLE CRYSTAL OF W191G WAS SOAKED IN 50MM IMIDAZOLE IN 40% MPD AND 60 MM PHOSPHATE AT PH 4.5.
Resolution 2.10 Å
1AET VARIATION IN THE STRENGTH OF A CH TO O HYDROGEN BOND IN AN ARTIFICIAL PROTEIN CAVITY (1-METHYLIMIDAZOLE) Deposited 1997-02-25 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 1MZ 1-METHYLIMIDAZOLE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；20% MPD, 40 MM PHOSPHATE PH 6.0. A SINGLE CRYSTAL OF W191G WAS SOAKED IN 50MM 1-METHYLIMIDAZOLE IN 40% MPD AND 60 MM PHOSPHATE AT PH 4.5.
Resolution 2.10 Å
1AEU SPECIFICITY OF LIGAND BINDING IN A POLAR CAVITY OF CYTOCHROME C PEROXIDASE (2-METHYLIMIDAZOLE) Deposited 1997-02-25 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 2MZ 2-METHYLIMIDAZOLE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；20% MPD, 40 MM PHOSPHATE PH 6.0. A SINGLE CRYSTAL OF W191G WAS SOAKED IN 50MM 2-METHYLIMIDAZOLE IN 40% MPD AND 60 MM PHOSPHATE AT PH 4.5.
Resolution 2.10 Å
1AEV INTRODUCTION OF NOVEL SUBSTRATE OXIDATION INTO CYTOCHROME C PEROXIDASE BY CAVITY COMPLEMENTATION: OXIDATION OF 2-AMINOTHIAZOLE AND COVALENT MODIFICATION OF THE ENZYME (2-AMINOTHIAZOLE) Deposited 1997-02-25 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 AMT 2-AMINOTHIAZOLE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；20% MPD, 40 MM PHOSPHATE PH 6.0. A SINGLE CRYSTAL OF W191G WAS SOAKED IN 50MM 2-AMINOTHIAZOLE IN 40% MPD AND 60 MM PHOSPHATE AT PH 4.5.
Resolution 2.10 Å
1BEJ INTERACTION BETWEEN PROXIMAL AND DISTALS REGIONS OF CYTOCHROME C PEROXIDASE Deposited 1998-05-16 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：MET ILE ADDED AT N-TERMINUS, W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；100 MM BTP PH 6.0; 30% MPD
Resolution 2.40 Å
1BEK EFFECT OF UNNATURAL HEME SUBSTITUTION ON KINETICS OF ELECTRON TRANSFER IN CYTOCHROME C PEROXIDASE Deposited 1998-05-16 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；50 MM POTASSIUM PHOSPHATE; 30% MPD, pH 6
Resolution 2.20 Å
1BEM INTERACTION BETWEEN PROXIMAL AND DISTALS REGIONS OF CYTOCHROME C PEROXIDASE Deposited 1998-05-16 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：MET ILE ADDED AT N-TERMINUS, W191Q HEM PROTOPORPHYRIN IX CONTAINING FE × 1 MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1 X-RAY DIFFRACTION
X-ray crystallization conditions 100 MM MES/TRIS; 30% MPD
Resolution 2.20 Å
1BEP EFFECT OF UNNATURAL HEME SUBSTITUTION ON KINETICS OF ELECTRON TRANSFER IN CYTOCHROME C PEROXIDASE Deposited 1998-05-16 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Not recorded CCH [7-ETHENYL-12-FORMYL-3,8,13,17-TERTRAMETHYL-21H,23H-PORPHINE-2,18-DIPROPANOATO(2)-N21,N22,N23,N24]IRON × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；30% MPD; 50 MM POTASSIUM PHOSPHATE, PH 6.0
Resolution 2.20 Å
1BEQ INTERACTION BETWEEN PROXIMAL AND DISTALS REGIONS OF CYTOCHROME C PEROXIDASE Deposited 1998-05-16 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：MET ILE ADDED AT N-TERMINUS, W191Y HEM PROTOPORPHYRIN IX CONTAINING FE × 1 MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；30% MPD; 50 MM MES/TRIS, PH 6.0
Resolution 2.16 Å
1BES INTERACTION BETWEEN PROXIMAL AND DISTALS REGIONS OF CYTOCHROME C PEROXIDASE Deposited 1998-05-16 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：MET ILE ADDED AT N-TERMINUS, W191Y CL CHLORIDE ION × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；30% MPD, 20 MM TRIS/MES PH 6.0, 150 MM NACL
Resolution 2.00 Å
1BJ9 EFFECT OF UNNATURAL HEME SUBSTITUTION ON KINETICS OF ELECTRON TRANSFER IN CYTOCHROME C PEROXIDASE Deposited 1998-07-03 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：T53I, D152G, N272D DDH [7,12-DEACETYL-3,8,13,17-TETRAMETHYL-21H,23H-PORPHINE-2,18-DIPROPANOATO(2-)-N21,N22,N23,N24]-IRON × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；pH 6
Resolution 2.20 Å
1BVA MANGANESE BINDING MUTANT IN CYTOCHROME C PEROXIDASE Deposited 1998-09-15 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Mutation：D37E,P44D,V45D MN MANGANESE (II) ION × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；20% MPD, 35 MM PHOSPHATE, PH 6.0, 5 MM MNSO4.
Resolution 1.89 Å
1CCA THE ASP-HIS-FE TRIAD OF CYTOCHROME C PEROXIDASE CONTROLS THE REDUCTION POTENTIAL, ELECTRONIC STRUCTURE, AND COUPLING OF THE TRYPTOPHAN FREE-RADICAL TO THE HEME Deposited 1993-01-04 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 1.80 Å
1CCB THE ASP-HIS-FE TRIAD OF CYTOCHROME C PEROXIDASE CONTROLS THE REDUCTION POTENTIAL, ELECTRONIC STRUCTURE, AND COUPLING OF THE TRYPTOPHAN FREE-RADICAL TO THE HEME Deposited 1993-01-04 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.10 Å
1CCC THE ASP-HIS-FE TRIAD OF CYTOCHROME C PEROXIDASE CONTROLS THE REDUCTION POTENTIAL, ELECTRONIC STRUCTURE, AND COUPLING OF THE TRYPTOPHAN FREE-RADICAL TO THE HEME Deposited 1993-01-04 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.00 Å
1CCE CONSTRUCTION OF A BIS-AQUO HEME ENZYME AND REPLACEMENT WITH EXOGENOUS LIGAND Deposited 1994-05-04 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.30 Å
1CCG CONSTRUCTION OF A BIS-AQUO HEME ENZYME AND REPLACEMENT WITH EXOGENOUS LIGAND Deposited 1994-05-04 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 IMD IMIDAZOLE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.10 Å
1CCI HOW FLEXIBLE ARE PROTEINS? TRAPPING OF A FLEXIBLE LOOP Deposited 1996-12-18 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：INS(MKT) AT N-TERMINUS, T53I, D152G, F202 DMI 2,3-DIMETHYLIMIDAZOLIUM ION × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；25% MPD, 70 MM PHOSPHATE PH 6.0
Resolution 2.40 Å
1CCJ CONFORMER SELECTION BY LIGAND BINDING OBSERVED WITH PROTEIN CRYSTALLOGRAPHY Deposited 1997-01-22 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：T1M, T2K, P3T, F202G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions dialaysis；DIALYSIS AGAINST DISTILLED WATER, dialaysis
Resolution 2.10 Å
1CCK ALTERING SUBSTRATE SPECIFICITY OF CYTOCHROME C PEROXIDASE TOWARDS A SMALL MOLECULAR SUBSTRATE PEROXIDASE BY SUBSTITUTING TYROSINE FOR PHE 202 Deposited 1998-01-02 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：F202Y HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions dialaysis；DIALYSIS AGAINST DISTILLED WATER, dialaysis
Resolution 2.10 Å
1CCL PROBING THE STRENGTH AND CHARACTER OF AN ASP-HIS-X HYDROGEN BOND BY INTRODUCING BURIED CHARGES Deposited 1998-01-02 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：F202K HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions dialaysis；DIALYSIS AGAINST DISTILLED WATER, dialaysis
Resolution 2.00 Å
1CCP X-RAY STRUCTURES OF RECOMBINANT YEAST CYTOCHROME C PEROXIDASE AND THREE HEME-CLEFT MUTANTS PREPARED BY SITE-DIRECTED MUTAGENESIS Deposited 1990-02-28 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.20 Å
1CMP SMALL MOLECULE BINDING TO AN ARTIFICIALLY CREATED CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE Deposited 1993-11-23 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Not recorded DMI 2,3-DIMETHYLIMIDAZOLIUM ION × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 1.90 Å
1CMQ SMALL MOLECULE BINDING TO AN ARTIFICIALLY CREATED CAVITY AT THE ACTIVE SITE OF CYTOCHROME C PEROXIDASE Deposited 1993-11-23 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.30 Å
1CMT THE ROLE OF ASPARTATE-235 IN THE BINDING OF CATIONS TO AN ARTIFICIAL CAVITY AT THE RADICAL SITE OF CYTOCHROME C PEROXIDASE Deposited 1995-04-11 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.10 Å
1CMU THE ROLE OF ASPARTATE-235 IN THE BINDING OF CATIONS TO AN ARTIFICIAL CAVITY AT THE RADICAL SITE OF CYTOCHROME C PEROXIDASE Deposited 1995-04-10 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.10 Å
1CPD A CATION BINDING MOTIF STABILIZES THE COMPOUND I RADICAL OF CYTOCHROME C PEROXIDASE Deposited 1994-08-18 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Not recorded NH4 AMMONIUM ION × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.20 Å
1CPE A CATION BINDING MOTIF STABILIZES THE COMPOUND I RADICAL OF CYTOCHROME C PEROXIDASE Deposited 1994-08-18 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Not recorded K POTASSIUM ION × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.20 Å
1CPF A CATION BINDING MOTIF STABILIZES THE COMPOUND I RADICAL OF CYTOCHROME C PEROXIDASE Deposited 1994-08-18 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.20 Å
1CPG A CATION BINDING MOTIF STABILIZES THE COMPOUND I RADICAL OF CYTOCHROME C PEROXIDASE Deposited 1994-08-18 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Not recorded K POTASSIUM ION × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.20 Å
1CYF IDENTIFYING THE PHYSIOLOGICAL ELECTRON TRANSFER SITE OF CYTOCHROME C PEROXIDASE BY STRUCTURE-BASED ENGINEERING Deposited 1995-07-03 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Mutation：INS(MET ILE AT N-TERMINUS), C128A, A193C HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.35 Å
1DCC 2.2 ANGSTROM STRUCTURE OF OXYPEROXIDASE: A MODEL FOR THE ENZYME:PEROXIDE COMPLEX Deposited 1994-06-01 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Not recorded OXY OXYGEN MOLECULE × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.20 Å
1DJ1 CRYSTAL STRUCTURE OF R48A MUTANT OF CYTOCHROME C PEROXIDASE Deposited 1999-11-30 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：R48A HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；291 K；POTASSIUM PHOSPHATE, 2-METHYL-2,4-PENTANEDIOL, pH 6, VAPOR DIFFUSION, SITTING DROP, temperature 291K
Resolution 1.93 Å
1DJ5 CRYSTAL STRUCTURE OF R48A MUTANT OF CYTOCHROME C PEROXIDASE WITH N-HYDROXYGUANIDINE BOUND Deposited 1999-12-01 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：R48A HEM PROTOPORPHYRIN IX CONTAINING FE × 1 HGU N-HYDROXYGUANIDINE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；291 K；POTASSIUM PHOSPHATE, 2-METHYL-2,4-PENTANEDIOL, N-HYDROXYGUANIDINE, pH 6, VAPOR DIFFUSION, SITTING DROP, temperature 291K
Resolution 1.93 Å
1DS4 CYTOCHROME C PEROXIDASE H175G MUTANT, IMIDAZOLE COMPLEX, PH 6, 100K Deposited 2000-01-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 70–361（292 aa）
Mutation：H175G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 IMD IMIDAZOLE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；291 K；MPD, MES, PH 6, IMIDAZOLE, VAPOR DIFFUSION, SITTING DROP, temperature 291K
Resolution 2.02 Å
1DSE CYTOCHROME C PEROXIDASE H175G MUTANT, IMIDAZOLE COMPLEX, WITH PHOSPHATE BOUND, PH 6, 100K Deposited 2000-01-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 70–361（292 aa）
Mutation：H175G PO4 PHOSPHATE ION × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 IMD IMIDAZOLE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions MICRODIALYSIS；pH 6；277 K；phosphate, imidazole, pH 6, MICRODIALYSIS, temperature 277K
Resolution 2.00 Å
1DSG CYTOCHROME C PEROXIDASE H175G MUTANT, IMIDAZOLE COMPLEX AT PH 5, ROOM TEMPERATURE. Deposited 2000-01-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 70–361（292 aa）
Mutation：H175G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 IMD IMIDAZOLE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions MICRODIALYSIS；pH 5.2；288 K；MES, imidazole, pH 5.2, MICRODIALYSIS, temperature 288K
Resolution 2.56 Å
1DSO CYTOCHROME C PEROXIDASE H175G MUTANT, IMIDAZOLE COMPLEX AT PH 6, ROOM TEMPERATURE. Deposited 2000-01-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 70–361（292 aa）
Mutation：H175G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 IMD IMIDAZOLE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions MICRODIALYSIS；pH 6；288 K；MES, imidazole, pH 6, MICRODIALYSIS, temperature 288K
Resolution 2.03 Å
1DSP CYTOCHROME C PEROXIDASE H175G MUTANT, IMIDAZOLE COMPLEX AT PH 7, ROOM TEMPERATURE. Deposited 2000-01-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 70–361（292 aa）
Mutation：H175G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 IMD IMIDAZOLE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions MICRODIALYSIS；pH 7；288 K；MES, imidazole, pH 7, MICRODIALYSIS, temperature 288K
Resolution 2.03 Å
1EBE Laue diffraction study on the structure of cytochrome c peroxidase compound I Deposited 2001-07-25 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 O OXYGEN ATOM × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；SEE REFERENCE EDWARDS ET AL. BIOCHEMISTRY 26, 1503-1511 (1987), pH 6.00
Resolution 2.20 Å
1JCI Stabilization of the Engineered Cation-binding Loop in Cytochrome c Peroxidase (CcP) Deposited 2001-06-09 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Mutation：A176T, G192T, A194N, N195P, T199D, E201S K POTASSIUM ION × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；277 K；2-Methyl-2,4-Pentanediol, potassium phosphate, pH 6.0, vapor diffusion, sitting drop, temperature 277K
Resolution 1.90 Å R-free 0.199
1JDR Crystal Structure of a Proximal Domain Potassium Binding Variant of Cytochrome c Peroxidase Deposited 2001-06-14 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Mutation：A176T, G192T, A194N, T199D, E201S K POTASSIUM ION × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；277 K；2,5-methyl-4-pentanediol, potassium phosphate, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Resolution 1.50 Å R-free 0.234
1KOK Crystal Structure of Mesopone Cytochrome c Peroxidase (MpCcP) Deposited 2001-12-20 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Not recorded HIF FE(III)-(4-MESOPORPHYRINONE) × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；277 K；2-Methyl-2,4-Pentanediol, potassium phosphate, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Resolution 1.70 Å R-free 0.207
1KRJ Engineering Calcium-binding site into Cytochrome c Peroxidase (CcP) Deposited 2002-01-09 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa） Fragment：Proximal Cation-binding Loop
Mutation：A176T, G192D, A194T, T199D, E201S K POTASSIUM ION × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；277 K；2-Methyl-2,4-Pentanediol (MPD), potassium phosphate, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Resolution 2.00 Å
1KXM Crystal structure of Cytochrome c Peroxidase with a Proposed Electron Transfer Pathway Excised to Form a Ligand Binding Channel. Deposited 2002-02-01 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 72–362（291 aa） Fragment：RESIDUES 72-362, NUMBERED 4-292
Mutation：P190G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 BZI BENZIMIDAZOLE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；298 K；MPD, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 298.0K
Resolution 1.74 Å R-free 0.214
1KXN Crystal Structure of Cytochrome c Peroxidase with a Proposed Electron Transfer Pathway Excised to Form a Ligand Binding Channel. Deposited 2002-02-01 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 72–362（291 aa） Fragment：RESIDUES 72-362, NUMBERED 4-292
Mutation：P190G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；298 K；MPD, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Resolution 1.80 Å R-free 0.194
1MK8 Crystal Structure of a Mutant Cytochrome c Peroxidase showing a Novel Trp-Tyr Covalent Cross-link Deposited 2002-08-28 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Mutation：H52Y HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；277 K；2-Methyl-2,4-Pentanediol (MPD), tris-phosphate, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Resolution 1.65 Å R-free 0.198
1MKQ Crystal Structure of the Mutant Variant of Cytochrome c Peroxidase in the 'Open' Uncross-linked form Deposited 2002-08-29 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Mutation：H52Y HEM PROTOPORPHYRIN IX CONTAINING FE × 1 MPD (4S)-2-METHYL-2,4-PENTANEDIOL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；277 K；2-Methyl-2,4-Pentanediol (MPD), Tris-phosphate, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Resolution 1.64 Å R-free 0.208
1MKR Crystal Structure of a Mutant Variant of Cytochrome c Peroxidase (Plate like crystals) Deposited 2002-08-29 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Mutation：H52Y HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；277 K；2-Methyl-2,4-Pentanediol (MPD), Tris-phosphate buffer, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Resolution 1.58 Å R-free 0.219
1ML2 Crystal Structure of a Mutant Variant of Cytochrome c Peroxidase with Zn(II)-(20-oxo-Protoporphyrin IX) Deposited 2002-08-29 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Mutation：H52Y ZEM 20-OXO-PROTOPORPHYRIN IX CONTAINING ZN(II) × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；277 K；2-Methyl-2,4-Pentanediol (MPD), tris-phosphate, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Resolution 1.65 Å R-free 0.215
1RYC CYTOCHROME C PEROXIDASE W191G FROM SACCHAROMYCES CEREVISIAE Deposited 1996-05-10 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 1–361（361 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 BZI BENZIMIDAZOLE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 1.80 Å
1S73 Crystal Structure of Mesopone Cytochrome c Peroxidase (R-isomer) [MpCcP-R] Deposited 2004-01-28 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Not recorded FMI FE-(4-MESOPORPHYRINONE)-R-ISOMER × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；277 K；tris-phosphate buffer, 2-methyl-2,4-pentanediol, pH 6, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Resolution 1.53 Å R-free 0.202
1SBM Crystal Structure of Reduced Mesopone cytochrome c peroxidase (R-isomer) Deposited 2004-02-10 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Not recorded FMI FE-(4-MESOPORPHYRINONE)-R-ISOMER × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；277 K；2-methyl-2,4-pentanediol (MPD), 100mM potassium phosphate, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Resolution 1.69 Å R-free 0.200
1SDQ Structure of reduced-NO adduct of mesopone cytochrome c peroxidase Deposited 2004-02-13 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Not recorded FMI FE-(4-MESOPORPHYRINONE)-R-ISOMER × 1 NO NITRIC OXIDE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；277 K；2-methyl-2,4-pentanediol (MPD), 50mM tris-phosphate, pH 6, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Resolution 1.69 Å R-free 0.215
1SOG Cyrstal Structure of Cytochrome c Peroxidase Mutant: CcPK2M2 Deposited 2004-03-14 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa） Fragment：CcPK2M2
Mutation：A176T, G192T, A194N, T199D, E201S, M230L, M231Q K POTASSIUM ION × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；277 K；MPD, Tris-phosphate, 18crown6, 15crown5, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Resolution 1.85 Å R-free 0.201
1STQ Cyrstal Structure of Cytochrome c Peroxidase Mutant: CcPK2M3 Deposited 2004-03-25 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Mutation：M172S, A176T, G192T, A194N, T199D, E201S, M230L, M231Q K POTASSIUM ION × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；277 K；MPD, Potassium Phosphate, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Resolution 1.82 Å R-free 0.216
1U74 Electron Transfer Complex between cytochrome C and cytochrome C peroxidase Deposited 2004-08-02 Different construct Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain A 68–361（294 aa） Fragment：1.11.1.5
Not recorded PO4 PHOSPHATE ION × 1 ZNH PROTOPORPHYRIN IX CONTAINING ZN × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；PEG 3350, sodium chloride, n-octyl-beta-D-glucoside, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
Resolution 2.40 Å R-free 0.287
1U74 Electron Transfer Complex between cytochrome C and cytochrome C peroxidase Deposited 2004-08-02 Different construct Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain C 68–361（294 aa） Fragment：1.11.1.5
Not recorded PO4 PHOSPHATE ION × 1 ZNH PROTOPORPHYRIN IX CONTAINING ZN × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；PEG 3350, sodium chloride, n-octyl-beta-D-glucoside, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
Resolution 2.40 Å R-free 0.287
1Z53 The 1.13 Angstrom Structure of Iron-free Cytochrome c Peroxidase Deposited 2005-03-17 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Not recorded PP9 PROTOPORPHYRIN IX × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；277 K；30% 2-methyl-2,4-pentanediol (MPD), 50 mM Tris-phosphate, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Resolution 1.13 Å R-free 0.177
1ZBY High-Resolution Crystal Structure of Native (Resting) Cytochrome c Peroxidase (CcP) Deposited 2005-04-09 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；277 K；30% 2-methyl-2,4-pentanediol (MPD), 50mM Tris-phosphate, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Resolution 1.20 Å R-free 0.149
1ZBZ High-Resolution Crystal Structure of Compound I intermediate of Cytochrome c Peroxidase (CcP) Deposited 2005-04-09 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；277 K；30% 2-methyl-2,4-pentanediol (MPD), 50mM Tris-phosphate buffer, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K
Resolution 1.29 Å R-free 0.155
2ANZ cytochrome c peroxidase in complex with 2,6-diaminopyridine Deposited 2005-08-11 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 26D PYRIDINE-2,6-DIAMINE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6；310 K；MES, MPD, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 310K
Resolution 1.75 Å R-free 0.210
2AQD cytochrome c peroxidase (CCP) in complex with 2,5-diaminopyridine Deposited 2005-08-17 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：cytochrome c peroxidase
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 DA1 PYRIDINE-2,5-DIAMINE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；310 K；MPD, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 310K
Resolution 1.35 Å R-free 0.163
2AS1 cytochrome c peroxidase in complex with thiopheneamidine Deposited 2005-08-22 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：cytochrome c peroxidase
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 TP5 THIOPHENE-3-CARBOXIMIDAMIDE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；291 K；MPD, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Resolution 1.55 Å R-free 0.200
2AS2 cytochrome c peroxidase in complex with 2-iminopiperidine Deposited 2005-08-22 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：cytochrome c peroxidase
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 2IM PIPERIDIN-2-IMINE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；291 K；MPD, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Resolution 1.45 Å R-free 0.177
2AS3 cytochrome c peroxidase in complex with phenol Deposited 2005-08-22 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：cytochrome c peroxidase
Mutation：W191G K POTASSIUM ION × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 IPH PHENOL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 4.5；291 K；MPD, acetate, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Resolution 1.40 Å R-free 0.188
2AS4 cytochrome c peroxidase in complex with 3-fluorocatechol Deposited 2005-08-22 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：cytochrome c peroxidase
Mutation：W191G K POTASSIUM ION × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 3FA 3-FLUOROBENZENE-1,2-DIOL × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 4.5；291 K；MPD, acetate, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Resolution 1.30 Å R-free 0.175
2AS6 cytochrome c peroxidase in complex with cyclopentylamine Deposited 2005-08-22 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：cytochrome c peroxidase
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 1CB CYCLOPENTANAMINE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；291 K；MPD, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Resolution 1.45 Å R-free 0.183
2B0Z Crystal structure of the protein-protein complex between F82I cytochrome c and cytochrome c peroxidase Deposited 2005-09-15 Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain A 68–361（294 aa）
Not recorded ZNH PROTOPORPHYRIN IX CONTAINING ZN × 1 HEC HEME C × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.70 Å R-free 0.289
2B10 Crystal Structure of the Protein-Protein Complex between F82S cytochrome c and cytochrome c peroxidase Deposited 2005-09-15 Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain A 68–361（294 aa）
Not recorded ZNH PROTOPORPHYRIN IX CONTAINING ZN × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 7；298 K；PEG 3350, NaCl, BOG, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Resolution 2.80 Å R-free 0.306
2B10 Crystal Structure of the Protein-Protein Complex between F82S cytochrome c and cytochrome c peroxidase Deposited 2005-09-15 Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain C 68–361（294 aa）
Not recorded ZNH PROTOPORPHYRIN IX CONTAINING ZN × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 7；298 K；PEG 3350, NaCl, BOG, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Resolution 2.80 Å R-free 0.306
2B11 Crystal structure of the protein-protein complex between F82W cytochrome c and cytochrome c peroxidase Deposited 2005-09-15 Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain A 68–361（294 aa）
Mutation：F82W ZNH PROTOPORPHYRIN IX CONTAINING ZN × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 7；298 K；PEG 3350, NaCl, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Resolution 2.30 Å R-free 0.293
2B11 Crystal structure of the protein-protein complex between F82W cytochrome c and cytochrome c peroxidase Deposited 2005-09-15 Different mutation/modification Different experimental conditions Different structure-quality metrics Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain C 68–361（294 aa）
Mutation：F82W HEC HEME C × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 7；298 K；PEG 3350, NaCl, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Resolution 2.30 Å R-free 0.293
2B12 Crystal structure of the protein-protein complex between F82Y cytochrome c and cytochrome c peroxidase Deposited 2005-09-15 Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain A 68–361（294 aa）
Not recorded ZNH PROTOPORPHYRIN IX CONTAINING ZN × 1 HEC HEME C × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 7；298 K；PEG 3350, NaCl, BOG, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Resolution 3.02 Å R-free 0.268
2CCP X-RAY STRUCTURES OF RECOMBINANT YEAST CYTOCHROME C PEROXIDASE AND THREE HEME-CLEFT MUTANTS PREPARED BY SITE-DIRECTED MUTAGENESIS Deposited 1990-02-28 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Mutation：D235N HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.20 Å
2CEP ROLE OF MET-230 IN INTRAMOLECULAR ELECTRON TRANSFER BETWEEN THE OXYFERRYL HEME AND TRP 191 IN CYTOCHROME C PEROXIDASE COMPOUND II Deposited 1994-05-31 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.20 Å
2CYP Crystal structure of yeast cytochrome C peroxidase refined at 1.7-angstroms resolution Deposited 1985-08-27 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 O OXYGEN ATOM × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 1.70 Å
2EUN Cytochrome c peroxidase (CCP) in complex with 2,4-diaminopyrimidine Deposited 2005-10-29 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 LG3 PYRIMIDINE-2,4-DIAMINE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6；298 K；50 mM potassium phosphate 20% MPD, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Resolution 1.70 Å R-free 0.226
2EUO Cytochrome c peroxidase (CCP) in complex with 1-methyl-1-lambda-5-pyridin-3-yl-amine Deposited 2005-10-29 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 LG5 1-METHYL-1,6-DIHYDROPYRIDIN-3-AMINE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6；298 K；50 mM KPi 20% MPD, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Resolution 1.45 Å R-free 0.181
2EUP Cytochrome c peroxidase (CCP) in complex with 2-amino-5-picoline Deposited 2005-10-29 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 LG4 5-METHYLPYRIDIN-2-AMINE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6；298 K；50 mM KPi 20 % MDP, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Resolution 1.40 Å R-free 0.181
2EUQ Cytochrome c peroxydase (CCP) in complex with 3-thienylmethylamine Deposited 2005-10-29 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 BVC 1-THIEN-3-YLMETHANAMINE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6；298 K；50 mM KPi 20% MPD, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Resolution 1.30 Å R-free 0.166
2EUR Cytochrome c peroxidase (CCP) in complex with 4-pyridylcarbinol Deposited 2005-10-29 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 PY7 PYRIDIN-4-YLMETHANOL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6；298 K；50 mM KPi 20% MPD, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Resolution 1.39 Å R-free 0.171
2EUS Cytochrome c peroxidase (CCP) in complex with benzylamine Deposited 2005-10-29 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 ABN BENZYLAMINE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6；298 K；50 mM KPi 20% MDP, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Resolution 1.55 Å R-free 0.178
2EUT Cytochrome c peroxidase (CCP) in complex with 2-amino-4-picoline Deposited 2005-10-29 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 BVF 4-METHYLPYRIDIN-2-AMINE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6；298 K；50 mM KPi 20% MPD, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Resolution 1.12 Å R-free 0.152
2EUU Cytochrome c peroxidase (CCP) in complex with 1H-imidazol-2-ylmethanol Deposited 2005-10-29 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 BVG 1H-IMIDAZOL-2-YLMETHANOL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6；298 K；50 mM KPi 20% MPD, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Resolution 1.45 Å R-free 0.161
2GB8 Solution structure of the complex between yeast iso-1-cytochrome c and yeast cytochrome c peroxidase Deposited 2006-03-10 Different construct Different mutation/modification Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain A 68–361（294 aa） Fragment：cytochrome c peroxidase
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 HEC HEME C × 1 SOLUTION NMR
NMR measurement conditions pH 6；301 K；Ionic strength (raw mmCIF value) 120mM；Pressure ambient
NMR sample composition 0.3-0.4mM Cc(Fe3+)-CcP(Fe3+), 1:1 complex; 20mM NaPi, 100mM NaCl pH 6.0 | 20mM NaPi, 100mM NaCl pH 6.0
Resolution not provided
2IA8 Kinetic and Crystallographic Studies of a Redesigned Manganese-Binding Site in Cytochrome c Peroxidase Deposited 2006-09-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 4.6；277 K；1.0 M hexanediol in 0.1 M sodium acetate trihydrate, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Resolution 1.48 Å R-free 0.247
2ICV Kinetic and Crystallographic Studies of a Redesigned Manganese-Binding Site in Cytochrome c Peroxidase Deposited 2006-09-13 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Not recorded CO COBALT (II) ION × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 4.6；277 K；1.0 M hexanediol in 0.1 M sodium acetate trihydrate, VAPOR DIFFUSION, HANGING DROP, temperature 277K, pH 4.6
Resolution 1.60 Å R-free 0.257
2JTI Solution structure of the yeast iso-1-cytochrome c (T12A) : yeast cytochrome c peroxidase complex Deposited 2007-08-01 Different mutation/modification Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain A 68–361（294 aa）
Mutation：N38C,N200C,S263C,T288C,C128A HEM PROTOPORPHYRIN IX CONTAINING FE × 1 HEC HEME C × 1 SOLUTION NMR
NMR measurement conditions pH 6；303 K；Pressure ambient
NMR sample composition 0.3-0.4 mM [U-15N] CC, 0.3-0.4 mM CCP, 93% H2O/7% D2O | 93% H2O/7% D2O
Resolution not provided
2N18 Dominant form of the low-affinity complex of yeast cytochrome c and cytochrome c peroxidase Deposited 2015-03-24 Different construct Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 3 PDB declaration: trimeric
Chain A 68–361（294 aa） Fragment：UNP residues 68-361
Mutation：C128A, V197C HEM PROTOPORPHYRIN IX CONTAINING FE × 1 HEC HEME C × 2 SOLUTION NMR
NMR measurement conditions pH 6；298 K；Ionic strength (raw mmCIF value) 15；Pressure ambient
NMR sample composition 0.4 mM [U-2H; U-15N] CcP, 0.4 mM Cc, 0.4 mM Cc1, 20 mM sodium phosphate, 93% H2O/7% D2O | 93% H2O/7% D2O
Resolution not provided
2PCB CRYSTAL STRUCTURE OF A COMPLEX BETWEEN ELECTRON TRANSFER PARTNERS, CYTOCHROME C PEROXIDASE AND CYTOCHROME C Deposited 1993-04-14 Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain A 68–361（294 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.80 Å
2PCB CRYSTAL STRUCTURE OF A COMPLEX BETWEEN ELECTRON TRANSFER PARTNERS, CYTOCHROME C PEROXIDASE AND CYTOCHROME C Deposited 1993-04-14 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain C 68–361（294 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.80 Å
2PCC CRYSTAL STRUCTURE OF A COMPLEX BETWEEN ELECTRON TRANSFER PARTNERS, CYTOCHROME C PEROXIDASE AND CYTOCHROME C Deposited 1993-04-14 Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain A 68–361（294 aa）
Not recorded SO4 SULFATE ION × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.30 Å
2PCC CRYSTAL STRUCTURE OF A COMPLEX BETWEEN ELECTRON TRANSFER PARTNERS, CYTOCHROME C PEROXIDASE AND CYTOCHROME C Deposited 1993-04-14 Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain C 68–361（294 aa）
Not recorded SO4 SULFATE ION × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.30 Å
2V23 Structure of cytochrome c peroxidase mutant N184R Y36A Deposited 2007-05-31 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Mutation：YES HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions MICRODIALYSIS；pH 6；MICRODIALYSIS INTO 50MM POTASSIUM PHOSPHATE, PH 6.0 CONTAINING 30% V/V MPD
Resolution 1.80 Å R-free 0.192
2V2E Structure of isoniazid (INH) bound to cytochrome c peroxidase mutant N184R Y36A Deposited 2007-06-05 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：RESIDUES 71-361
Mutation：YES HEM PROTOPORPHYRIN IX CONTAINING FE × 1 ISZ 4-(DIAZENYLCARBONYL)PYRIDINE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions MICRODIALYSIS；pH 6；MICRODIALYSIS INTO 50MM POTASSIUM PHOSPHATE, PH 6.0 CONTAINING 30% V/V MPD. ISONIAZID WAS DISSOLVED INTO THE MOTHER LIQUOR (300MM) AND SOAKED INTO THE CRYSTAL.
Resolution 1.68 Å R-free 0.187
2X07 cytochrome c peroxidase: engineered ascorbate binding site Deposited 2009-12-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 69–361（293 aa） Fragment：RESIDUES 69-361
Mutation：YES HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；DIALYSIS AGAINST PHOSPHATE BUFFER 50 MM PH 6, MPD 30%
Resolution 1.86 Å R-free 0.247
2X08 cytochrome c peroxidase: ascorbate bound to the engineered ascorbate binding site Deposited 2009-12-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 69–361（293 aa） Fragment：RESIDUES 69-361
Mutation：YES ASC ASCORBIC ACID × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；DIALYSIS AGAINST PHOSPHATE BUFFER 50 MM PH 6, MPD 30%
Resolution 2.01 Å
2XIL The structure of cytochrome c peroxidase Compound I Deposited 2010-06-30 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：RESIDUES 71-361
Not recorded MPD (4S)-2-METHYL-2,4-PENTANEDIOL × 3 MRD (4R)-2-METHYLPENTANE-2,4-DIOL × 3 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6.5；KPI 50 MM PH 6.5, MPD 30% (V/V)
Resolution 1.68 Å R-free 0.199
2XJ5 The structure of cytochrome c peroxidase Compound II Deposited 2010-07-02 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：RESIDUES 71-361
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 MPD (4S)-2-METHYL-2,4-PENTANEDIOL × 6 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6.5；KPI 50 MM PH 6.5, MPD 30% VOLUME
Resolution 1.69 Å R-free 0.197
2XJ8 The structure of ferrous cytochrome c peroxidase Deposited 2010-07-02 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：RESIDUES 71-361
Not recorded MPD (4S)-2-METHYL-2,4-PENTANEDIOL × 2 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6.5；pH 6.5
Resolution 1.69 Å R-free 0.210
2Y5A Cytochrome c peroxidase (CCP) W191G bound to 3-aminopyridine Deposited 2011-01-12 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：RESIDUES 71-361
Mutation：YES HEM PROTOPORPHYRIN IX CONTAINING FE × 1 3AP 3-AMINOPYRIDINE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions CRYSTAL WAS SOAKED IN: 125 MM ACETIC ACID / BTP PH 4.5, 25% MPD.
Resolution 1.25 Å R-free 0.164
2YCG Structure of unreduced ferric cytochrome c peroxidase obtained by multicrystal method Deposited 2011-03-14 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 MPD (4S)-2-METHYL-2,4-PENTANEDIOL × 2 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6.5；pH 6.5
Resolution 1.81 Å R-free 0.196
3CCP X-RAY STRUCTURES OF RECOMBINANT YEAST CYTOCHROME C PEROXIDASE AND THREE HEME-CLEFT MUTANTS PREPARED BY SITE-DIRECTED MUTAGENESIS Deposited 1990-02-28 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Mutation：W191F HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.20 Å
3CCX ALTERING SUBSTRATE SPECIFICITY AT THE HEME EDGE OF CYTOCHROME C PEROXIDASE Deposited 1995-03-17 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.30 Å
3E2N Engineering ascorbate peroxidase activity into cytochrome c peroxidase Deposited 2008-08-05 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–96（29 aa） Fragment：UNP residues 68-361, see remark 999
Chain A 110–361（252 aa） Fragment：UNP residues 68-361, see remark 999
Mutation：N251R, W258F Mutation：N251R, W258F HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；298 K；22% 2-methyl-2,4-pentanediol (MPD), 0.05M Tris-phosphate, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Resolution 1.30 Å
3E2O Crystal structure of cytochrome c peroxidase, N184R mutant Deposited 2008-08-05 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa） Fragment：UNP residues 68-361
Mutation：N184R HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；298 K；22% 2-methyl-2,4-pentanediol (MPD), 0.05M Tris-phosphate, pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Resolution 1.06 Å R-free 0.199
3EXB Crystal structure of Cytochrome C Peroxidase with a Proposed Electron Pathway Excised in a Complex with a Peptide Wire Deposited 2008-10-16 Different construct Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain A 68–361（294 aa） Fragment：sequence database residues 72-362
Mutation：P190G, W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION；pH 6；282 K；200 mM KPi, 25% MPD, pH 6.0, VAPOR DIFFUSION, temperature 282K
Resolution 1.60 Å R-free 0.190
3M23 Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate Deposited 2010-03-06 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：UNP residues 71-361
Mutation：N184R HEM PROTOPORPHYRIN IX CONTAINING FE × 1 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；277.2 K；10uL (350-400uM protein), 22% MPD, 50mM tris phoshate buffer pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277.2K
Resolution 1.40 Å
3M25 Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate Deposited 2010-03-06 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：UNP resideus 71-361
Mutation：N184R HEM PROTOPORPHYRIN IX CONTAINING FE × 1 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；277.2 K；10uL (350-400uM protein), 22% MPD, 50mM tris phoshate buffer pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277.2K
Resolution 1.40 Å
3M26 Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate Deposited 2010-03-06 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：UNP residues 71-361
Mutation：N184R HEM PROTOPORPHYRIN IX CONTAINING FE × 1 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；277.2 K；10uL (350-400uM protein), 22% MPD, 50mM tris phoshate buffer pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277.2K
Resolution 1.40 Å
3M27 Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate Deposited 2010-03-06 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：UNP residues 71-361
Mutation：N184R HEM PROTOPORPHYRIN IX CONTAINING FE × 1 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；277.2 K；10uL (350-400uM protein), 22% MPD, 50mM tris phoshate buffer pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277.2K
Resolution 1.40 Å
3M28 Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate Deposited 2010-03-06 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：UNP residues 71-361
Mutation：N184R HEM PROTOPORPHYRIN IX CONTAINING FE × 1 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；277.2 K；10uL (350-400uM protein), 22% MPD, 50mM tris phoshate buffer pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277.2K
Resolution 1.40 Å
3M29 Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate Deposited 2010-03-06 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：UNP residues 71-361
Mutation：N184R HEM PROTOPORPHYRIN IX CONTAINING FE × 1 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；277.2 K；10uL (350-400uM protein), 22% MPD, 50mM tris phoshate buffer pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277.2K
Resolution 1.40 Å
3M2A Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate Deposited 2010-03-06 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：UNP residues 71-361
Mutation：N184R HEM PROTOPORPHYRIN IX CONTAINING FE × 1 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；277.2 K；10uL (350-400uM protein), 22% MPD, 50mM tris phoshate buffer pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277.2K
Resolution 1.40 Å
3M2B Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate Deposited 2010-03-06 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：UNP residues 71-361
Mutation：N184R HEM PROTOPORPHYRIN IX CONTAINING FE × 1 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；277.2 K；10uL (350-400uM protein), 22% MPD, 50mM tris phoshate buffer pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277.2K
Resolution 1.40 Å
3M2C Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate Deposited 2010-03-06 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：UNP residues 71-361
Mutation：N184R HEM PROTOPORPHYRIN IX CONTAINING FE × 1 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；277.2 K；10uL (350-400uM protein), 22% MPD, 50mM tris phoshate buffer pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277.2K
Resolution 1.40 Å
3M2D Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate Deposited 2010-03-06 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：UNP residues 71-361
Mutation：N184R HEM PROTOPORPHYRIN IX CONTAINING FE × 1 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；277.2 K；10uL (350-400uM protein), 22% MPD, 50mM tris phoshate buffer pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277.2K
Resolution 1.40 Å
3M2E Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate Deposited 2010-03-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：UNP residues 71-361
Mutation：N184R HEM PROTOPORPHYRIN IX CONTAINING FE × 1 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；277.2 K；10uL (350-400uM protein), 22% MPD, 50mM tris phoshate buffer pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277.2K
Resolution 1.40 Å
3M2F Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate Deposited 2010-03-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：UNP residues 71-361
Mutation：N184R HEM PROTOPORPHYRIN IX CONTAINING FE × 1 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；277.2 K；10uL (350-400uM protein), 22% MPD, 50mM tris phoshate buffer pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277.2K
Resolution 1.40 Å
3M2G Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate Deposited 2010-03-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：UNP residues 71-361
Mutation：N184R HEM PROTOPORPHYRIN IX CONTAINING FE × 1 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；277.2 K；10uL (350-400uM protein), 22% MPD, 50mM tris phoshate buffer pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277.2K
Resolution 1.40 Å
3M2H Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate Deposited 2010-03-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：UNP residues 71-361
Mutation：N184R HEM PROTOPORPHYRIN IX CONTAINING FE × 1 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；277.2 K；10uL (350-400uM protein), 22% MPD, 50mM tris phoshate buffer pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277.2K
Resolution 1.40 Å R-free 0.155
3M2I Crystallographic and Single Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate Deposited 2010-03-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：UNP residues 71-361
Mutation：N184R HEM PROTOPORPHYRIN IX CONTAINING FE × 1 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions pH 6；277.2 K；10uL (350-400uM protein), 22% MPD, 50mM tris phoshate buffer pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277.2K
Resolution 1.40 Å
3R98 Joint Neutron and X-ray structure of Cytochrome c peroxidase Deposited 2011-03-25 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 69–361（293 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 Experimental method not declared
X-ray crystallization conditions MICRODIALYSIS；pH 6；298 K；50mM potassium phosphate, 30% MPD, pH 6.0(in D2O), MICRODIALYSIS, temperature 298K
Resolution not provided
3R99 Joint Neutron and X-ray structure of Cytochrome c peroxidase Deposited 2011-03-25 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 69–361（293 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 Experimental method not declared
X-ray crystallization conditions MICRODIALYSIS；pH 6；298 K；50mM potassium phosphate, 30% MPD, pH 6.0(in D2O), MICRODIALYSIS, temperature 298K
Resolution not provided
4A6Z Cytochrome c peroxidase with bound guaiacol Deposited 2011-11-10 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Mutation：YES HEM PROTOPORPHYRIN IX CONTAINING FE × 1 JZ3 Guaiacol × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 1.61 Å R-free 0.210
4A71 cytochrome c peroxidase in complex with phenol Deposited 2011-11-10 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Mutation：YES HEM PROTOPORPHYRIN IX CONTAINING FE × 1 IPH PHENOL × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 1.61 Å R-free 0.186
4A78 cytochrome c peroxidase M119W in complex with guiacol Deposited 2011-11-11 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Mutation：YES HEM PROTOPORPHYRIN IX CONTAINING FE × 1 JZ3 Guaiacol × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.01 Å R-free 0.232
4A7M cytochrome c peroxidase S81W mutant Deposited 2011-11-14 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Mutation：YES HEM PROTOPORPHYRIN IX CONTAINING FE × 1 MRD (4R)-2-METHYLPENTANE-2,4-DIOL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions MICRODIALYSIS；pH 6；MICRODIALYSIS AGAINST 30% MPD., pH 6.0
Resolution 1.71 Å R-free 0.209
4CCP X-RAY STRUCTURES OF RECOMBINANT YEAST CYTOCHROME C PEROXIDASE AND THREE HEME-CLEFT MUTANTS PREPARED BY SITE-DIRECTED MUTAGENESIS Deposited 1990-02-28 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Mutation：W51F HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.20 Å
4CCX ALTERING SUBSTRATE SPECIFICITY AT THE HEME EDGE OF CYTOCHROME C PEROXIDASE Deposited 1995-03-17 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 1.90 Å
4JB4 Expression, Purification, Characterization, and Solution NMR Study of Highly Deuterated Yeast Cytochrome c Peroxidase with Enhanced Solubility Deposited 2013-02-19 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa） Fragment：cytochrome-c peroxidase, UNP residues 68-361
Mutation：T1M, T2K, P3T HEM PROTOPORPHYRIN IX CONTAINING FE × 1 F FLUORIDE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 5；298 K；0.2M NH4Cl, 0.1 M CH3COONa pH5.0 and 20% w/v PEG 6000, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Resolution 2.39 Å R-free 0.279
4JB4 Expression, Purification, Characterization, and Solution NMR Study of Highly Deuterated Yeast Cytochrome c Peroxidase with Enhanced Solubility Deposited 2013-02-19 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain C 68–361（294 aa） Fragment：cytochrome-c peroxidase, UNP residues 68-361
Mutation：T1M, T2K, P3T HEM PROTOPORPHYRIN IX CONTAINING FE × 1 F FLUORIDE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 5；298 K；0.2M NH4Cl, 0.1 M CH3COONa pH5.0 and 20% w/v PEG 6000, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Resolution 2.39 Å R-free 0.279
4NFG K13R mutant of horse cytochrome c and yeast cytochrome c peroxidase complex Deposited 2013-10-31 Different construct Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain A 71–361（291 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 UNX UNKNOWN LIGAND × 1 HEC HEME C × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 7；298 K；15% PEG 3350, 150 mM NaCl, 0.5 mM 1:1 ratio of horse cytochrome c and yeast cytochrome c peroxidase, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Resolution 2.11 Å R-free 0.236
4P4Q Complex of yeast cytochrome c peroxidase (W191F) with iso-1 cytochrome c Deposited 2014-03-12 Different construct Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain A 68–361（294 aa） Fragment：UNP residues 68-361
Mutation：W191F HEM PROTOPORPHYRIN IX CONTAINING FE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；298 K；PEG 3350 15-15%, 100 mM NaAcetate, 175 mM NaCl
Resolution 2.01 Å R-free 0.278
4P4Q Complex of yeast cytochrome c peroxidase (W191F) with iso-1 cytochrome c Deposited 2014-03-12 Different construct Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain C 68–361（294 aa） Fragment：UNP residues 68-361
Mutation：W191F HEM PROTOPORPHYRIN IX CONTAINING FE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；298 K；PEG 3350 15-15%, 100 mM NaAcetate, 175 mM NaCl
Resolution 2.01 Å R-free 0.278
4XV4 CcP gateless cavity Deposited 2015-01-26 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：unp residues 71-361
Mutation：P190G, W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 25T 2-AMINO-5-METHYLTHIAZOLE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6；283 K；Compound soaked into crystal grown in equal volume of 500mM MES buffer and 25% MPD
Resolution 1.69 Å R-free 0.150
4XV5 CcP gateless cavity Deposited 2015-01-26 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：unp residues 71-362
Mutation：P190G, W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 BZI BENZIMIDAZOLE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6；283 K；Compound soaked into crystal grown in equal volume of 500mM MES buffer and 25% MPD
Resolution 1.65 Å R-free 0.150
4XV6 CcP gateless cavity Deposited 2015-01-26 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：P190G, W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6；283 K；CRYSTAL GROWN IN EQUAL VOLUME OF 500mM MES BUFFER AND 25% MPD
Resolution 1.55 Å R-free 0.136
4XV7 CcP gateless cavity Deposited 2015-01-26 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：RESIDUES 72-362, NUMBERED 4-292
Mutation：P190G, W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 1LQ quinazolin-4-amine × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6；283 K；Compound soaked into crystal grown in equal volume of 500mM MES buffer and 25% MPD
Resolution 1.62 Å R-free 0.148
4XV8 CcP gateless cavity Deposited 2015-01-26 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：unp residues 71-361
Mutation：P190G, W191G HEM PROTOPORPHYRIN IX CONTAINING FE × 1 BEN BENZAMIDINE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6；283 K；Compound soaked into crystal grown in equal volume of 500mM MES buffer and 25% MPD
Resolution 1.57 Å R-free 0.140
4XVA Crystal structure of wild type cytochrome c peroxidase Deposited 2015-01-26 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 69–361（293 aa） Fragment：unp residues 69-361
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 BZI BENZIMIDAZOLE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6；283 K；Compound soaked into crystal grown in equal volume of 500mM MES buffer and 25% MPD
Resolution 2.66 Å R-free 0.276
4XVA Crystal structure of wild type cytochrome c peroxidase Deposited 2015-01-26 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain C 69–361（293 aa） Fragment：unp residues 69-361
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 BZI BENZIMIDAZOLE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6；283 K；Compound soaked into crystal grown in equal volume of 500mM MES buffer and 25% MPD
Resolution 2.66 Å R-free 0.276
4XVA Crystal structure of wild type cytochrome c peroxidase Deposited 2015-01-26 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 3 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain E 69–361（293 aa） Fragment：unp residues 69-361
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 BZI BENZIMIDAZOLE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6；283 K；Compound soaked into crystal grown in equal volume of 500mM MES buffer and 25% MPD
Resolution 2.66 Å R-free 0.276
4XVA Crystal structure of wild type cytochrome c peroxidase Deposited 2015-01-26 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 4 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain G 69–361（293 aa） Fragment：unp residues 69-361
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6；283 K；Compound soaked into crystal grown in equal volume of 500mM MES buffer and 25% MPD
Resolution 2.66 Å R-free 0.276
5CCP HISTIDINE 52 IS A CRITICAL RESIDUE FOR RAPID FORMATION OF CYTOCHROME C PEROXIDASE COMPOUND I Deposited 1993-06-07 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Mutation：H52L HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.20 Å
5CIB Complex of yeast cytochrome c peroxidase (W191G) bound to 2,4-dimethylaniline with iso-1 cytochrome c Deposited 2015-07-11 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 4 PDB declaration: tetrameric
Chain A 68–361（294 aa） Fragment：cytochrome c peroxidase
Chain C 68–361（294 aa） Fragment：cytochrome c peroxidase
Mutation：W191G Mutation：W191G HEC HEME C × 4 51S 2,4-dimethylaniline × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；298 K；PEG 3350 15-15%, 100 mM NaAcetate, 175 mM NaCl
Resolution 3.01 Å R-free 0.304
5CIC Complex of yeast cytochrome c peroxidase (W191G) bound to 3-aminobenzotrifluoride with iso-1 cytochrome c Deposited 2015-07-11 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 4 PDB declaration: tetrameric
Chain A 68–361（294 aa）
Chain C 68–361（294 aa）
Mutation：W191G Mutation：W191G HEC HEME C × 4 51R 3-(trifluoromethyl)aniline × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；289 K；PEG 3350 15-15%, 100 mM NaAcetate, 175 mM NaCl
Resolution 2.10 Å R-free 0.228
5CID Complex of yeast cytochrome c peroxidase (W191G) bound to o-toluidine with iso-1 cytochrome c Deposited 2015-07-12 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 4 PDB declaration: tetrameric
Chain A 68–361（294 aa） Fragment：W191G
Chain C 68–361（294 aa） Fragment：W191G
Not recorded HEC HEME C × 4 51V 2-methylaniline × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；298 K；PEG 3350 15-15%, 100 mM NaAcetate, 175 mM NaCl
Resolution 2.76 Å R-free 0.268
5CIE Complex of yeast cytochrome c peroxidase (W191G) bound to aniline with iso-1 cytochrome c Deposited 2015-07-12 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 4 PDB declaration: tetrameric
Chain A 68–361（294 aa）
Chain C 68–361（294 aa）
Mutation：W191G Mutation：W191G HEC HEME C × 4 ANL ANILINE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；298 K；PEG 3350 15-15%, 100 mM NaAcetate, 175 mM NaCl
Resolution 2.60 Å R-free 0.294
5CIF Complex of yeast cytochrome c peroxidase (W191F) with iso-1 cytochrome c Deposited 2015-07-12 Different construct Different mutation/modification Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain A 68–361（294 aa） Fragment：UNP residues 68-361
Mutation：W191F HEC HEME C × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；298 K；PEG 3350 15-15%, 100 mM NaAcetate, 175 mM NaCl
Resolution 2.01 Å R-free 0.268
5CIF Complex of yeast cytochrome c peroxidase (W191F) with iso-1 cytochrome c Deposited 2015-07-12 Different construct Different mutation/modification Different experimental conditions Different structure-quality metrics Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain C 68–361（294 aa） Fragment：UNP residues 68-361
Mutation：W191F HEC HEME C × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；298 K；PEG 3350 15-15%, 100 mM NaAcetate, 175 mM NaCl
Resolution 2.01 Å R-free 0.268
5CIG Complex of yeast cytochrome c peroxidase (W191G) with iso-1 cytochrome c Deposited 2015-07-12 Different construct Different mutation/modification Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain A 68–361（294 aa） Fragment：UNP residues 68-361
Mutation：W191G HEC HEME C × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；289 K；PEG 3350 15-15%, 100 mM NaAcetate, 175 mM NaCl
Resolution 2.06 Å R-free 0.298
5CIG Complex of yeast cytochrome c peroxidase (W191G) with iso-1 cytochrome c Deposited 2015-07-12 Different construct Different mutation/modification Different experimental conditions Different structure-quality metrics Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain C 68–361（294 aa） Fragment：UNP residues 68-361
Mutation：W191G HEC HEME C × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；289 K；PEG 3350 15-15%, 100 mM NaAcetate, 175 mM NaCl
Resolution 2.06 Å R-free 0.298
5CIH Complex of yeast cytochrome c peroxidase (W191Y) with iso-1 cytochrome c Deposited 2015-07-12 Different construct Different mutation/modification Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain A 68–361（294 aa） Fragment：UNP residues 68-361
Mutation：T53I, D152G, W191Y HEC HEME C × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；298 K；PEG 3350 15-15%, 100 mM NaAcetate, 175 mM NaCl
Resolution 2.60 Å R-free 0.310
5CIH Complex of yeast cytochrome c peroxidase (W191Y) with iso-1 cytochrome c Deposited 2015-07-12 Different construct Different mutation/modification Different experimental conditions Different structure-quality metrics Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain C 68–361（294 aa） Fragment：UNP residues 68-361
Mutation：T53I, D152G, W191Y HEC HEME C × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；298 K；PEG 3350 15-15%, 100 mM NaAcetate, 175 mM NaCl
Resolution 2.60 Å R-free 0.310
5D6M Mn(II)-loaded MnCcP.1 Deposited 2015-08-12 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa） Fragment：UNP residues 71-361
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 MN MANGANESE (II) ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；277 K；0.2 M Sodium iodide, 20% w/v Polyethylene glycol 3,350
Resolution 1.65 Å R-free 0.197
5EJT Thermally annealed ferryl Cytochrome C Peroxidase crystal structure Deposited 2015-11-02 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Mutation：R184N HEM PROTOPORPHYRIN IX CONTAINING FE × 1 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；277 K；10UL (350-400UM PROTEIN), 22% MPD, 50MM TRIS PHOSHATE BUFFER PH 6.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277.2K
Resolution 1.55 Å R-free 0.177
5EJX X-ray Free Electron Laser Structure of Cytochrome C Peroxidase Deposited 2015-11-02 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Mutation：N184R HEM PROTOPORPHYRIN IX CONTAINING FE × 1 PO4 PHOSPHATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；277 K；10UL (350-400UM PROTEIN), 22% MPD, 50MM TRIS PHOSHATE BUFFER PH 6.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277.2K
Resolution 1.50 Å R-free 0.261
6CCP EFFECT OF ARGININE-48 REPLACEMENT ON THE REACTION BETWEEN CYTOCHROME C PEROXIDASE AND HYDROGEN PEROXIDE Deposited 1993-06-07 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Mutation：R48K HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.20 Å
6H08 The crystal structure of engineered cytochrome c peroxidase from Saccharomyces cerevisiae with a His175Me-His proximal ligand substitution Deposited 2018-07-06 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) HEM PROTOPORPHYRIN IX CONTAINING FE × 1 CO COBALT (II) ION × 1 MN MANGANESE (II) ION × 1 NA SODIUM ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；277 K；5 mM cobalt(II) chloride hexahydrate, 5 mM cadmium chloride hemi(pentahydrate), 5 mM magnesium chloride hexahydrate, 5 mM nickel(II) chloride hexahydrate, 0.1 M HEPES pH 7.5 and 12% w/v PEG 3350
Resolution 1.90 Å R-free 0.205
6H08 The crystal structure of engineered cytochrome c peroxidase from Saccharomyces cerevisiae with a His175Me-His proximal ligand substitution Deposited 2018-07-06 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain B 71–361（291 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) HEM PROTOPORPHYRIN IX CONTAINING FE × 1 CO COBALT (II) ION × 2 NA SODIUM ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；277 K；5 mM cobalt(II) chloride hexahydrate, 5 mM cadmium chloride hemi(pentahydrate), 5 mM magnesium chloride hexahydrate, 5 mM nickel(II) chloride hexahydrate, 0.1 M HEPES pH 7.5 and 12% w/v PEG 3350
Resolution 1.90 Å R-free 0.205
6H08 The crystal structure of engineered cytochrome c peroxidase from Saccharomyces cerevisiae with a His175Me-His proximal ligand substitution Deposited 2018-07-06 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 3 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain C 71–361（291 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) HEM PROTOPORPHYRIN IX CONTAINING FE × 1 CO COBALT (II) ION × 3 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 6；277 K；5 mM cobalt(II) chloride hexahydrate, 5 mM cadmium chloride hemi(pentahydrate), 5 mM magnesium chloride hexahydrate, 5 mM nickel(II) chloride hexahydrate, 0.1 M HEPES pH 7.5 and 12% w/v PEG 3350
Resolution 1.90 Å R-free 0.205
6P41 Yeast cytochrome c peroxidase (W191Y:L232E) in complex with iso-1 cytochrome c Deposited 2019-05-25 Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain A 68–361（294 aa）
Mutation：W191Y, L232E HEM PROTOPORPHYRIN IX CONTAINING FE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；298 K；100 mM sodium acetate,175 mM NaCl, 5 mM n-octyl-B-D-glucoside, polyethylene glycol 3350 18%-20%
Resolution 2.90 Å R-free 0.273
6P41 Yeast cytochrome c peroxidase (W191Y:L232E) in complex with iso-1 cytochrome c Deposited 2019-05-25 Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain C 68–361（294 aa）
Mutation：W191Y, L232E HEM PROTOPORPHYRIN IX CONTAINING FE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；298 K；100 mM sodium acetate,175 mM NaCl, 5 mM n-octyl-B-D-glucoside, polyethylene glycol 3350 18%-20%
Resolution 2.90 Å R-free 0.273
6P42 Yeast cytochrome c peroxidase (W191Y:L232H) in complex with iso-1 cytochrome c Deposited 2019-05-25 Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain A 68–361（294 aa）
Mutation：W191Y, L232H HEM PROTOPORPHYRIN IX CONTAINING FE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；298 K；100 mM sodium acetate,175 mM NaCl, 5 mM n-octyl-B-D-glucoside, polyethylene glycol 3350 18%-20%, L-proline
Resolution 2.90 Å R-free 0.271
6P42 Yeast cytochrome c peroxidase (W191Y:L232H) in complex with iso-1 cytochrome c Deposited 2019-05-25 Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain C 68–361（294 aa）
Mutation：W191Y, L232H HEM PROTOPORPHYRIN IX CONTAINING FE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；298 K；100 mM sodium acetate,175 mM NaCl, 5 mM n-octyl-B-D-glucoside, polyethylene glycol 3350 18%-20%, L-proline
Resolution 2.90 Å R-free 0.271
6P43 Yeast cytochrome c peroxidase in complex with iso-1 cytochrome c (Y48K) Deposited 2019-05-25 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 3 PDB declaration: trimeric
Chain A 68–361（294 aa）
Chain C 68–361（294 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 3 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；298 K；100 mM sodium acetate, 175 mM NaCl, 5 mM n-octyl-B-D-glucoside, polyethylene glycol 3350 14%-20%
Resolution 1.91 Å R-free 0.228
6Y1T The crystal structure of engineered cytochrome c peroxidase from Saccharomyces cerevisiae with a Trp51 to S-Trp51 modification Deposited 2020-02-13 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Mutation：Trp51S-Trp Non-standard monomer：Yes (specific site not provided by mmCIF) HEM PROTOPORPHYRIN IX CONTAINING FE × 1 EDO 1,2-ETHANEDIOL × 1 1PE PENTAETHYLENE GLYCOL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；277.15 K；60 mM magnesium chloride hexahydrate, 60 mM calcuim chloride dihydrate, 0.1 M imidazole, 0.1 M MES pH 6.5, 20% v/v ethylene glycol and 10% w/v PEG 8000
Resolution 1.50 Å R-free 0.177
6Y2Y The crystal structure of engineered cytochrome c peroxidase from Saccharomyces cerevisiae with Trp51 to S-Trp51 and Trp191Phe modifications Deposited 2020-02-17 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 71–361（291 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) HEM PROTOPORPHYRIN IX CONTAINING FE × 1 EDO 1,2-ETHANEDIOL × 4 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；277.15 K；0.1 M HEPES pH 7.5 and 10% w/v PEG 8000
Resolution 1.70 Å R-free 0.180
7CCP EFFECT OF ARGININE-48 REPLACEMENT ON THE REACTION BETWEEN CYTOCHROME C PEROXIDASE AND HYDROGEN PEROXIDE Deposited 1993-06-07 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Mutation：R48L HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.20 Å
9C8L High-resolution structure of cytochrome c peroxidase from yeast at ambient temperature and ambient pressure Deposited 2024-06-12 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；293 K；10-25 % polyethylene glycol 550 (MME) and 100 mM 2-(N-morpholino)ethanesulfonic acid (pH 6.1-7.1)
Resolution 1.54 Å R-free 0.180
9C8M High-resolution structure of cytochrome c peroxidase from yeast under cryogenic conditions and ambient pressure Deposited 2024-06-12 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；293 K；10-25 % polyethylene glycol 550 (MME) and 100 mM 2-(N-morpholino)ethanesulfonic acid (pH 6.1-7.1)
Resolution 1.78 Å R-free 0.213
9C8O High-resolution structure of cytochrome c peroxidase from yeast at ambient temperature and 1.5 kbar Deposited 2024-06-12 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 PER PEROXIDE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；293 K；10-25 % polyethylene glycol 550 (MME) and 100 mM 2-(N-morpholino)ethanesulfonic acid (pH 6.1-7.1)
Resolution 2.31 Å R-free 0.250
9C8P High-resolution structure of cytochrome c peroxidase from yeast at ambient temperature and 3.0 kbar Deposited 2024-06-12 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 68–361（294 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；293 K；10-25 % polyethylene glycol 550 (MME) and 100 mM 2-(N-morpholino)ethanesulfonic acid (pH 6.1-7.1)
Resolution 2.31 Å R-free 0.273

175 other PDB entries and 192 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name CCPR_YEAST
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A； PDBConstruct 1–294； UniProt 68–361 Author chain C； PDBConstruct 1–294； UniProt 68–361

Cytochrome c, iso-1

Saccharomyces cerevisiae

UniProt P00044

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 2 PDB declaration: dimeric（2） Consistent with protein copy count Chain B； UniProt 2–108 Mutation：A81C, C102T Cytochrome c peroxidase, mitochondrial × 1 （P00431） IOD IODIDE ION × 1 HEC HEME C × 2 X-RAY DIFFRACTION X-ray crystallization conditions：VAPOR DIFFUSION, SITTING DROP；298 K；PEG 3350, KI, VAPOR DIFFUSION, SITTING DROP, temperature 298K Resolution 1.88 Å R-free 0.243
2 Protein heterocomplex Heteromer Protein × 2 PDB declaration: dimeric（2） Consistent with protein copy count Chain D； UniProt 2–108 Mutation：A81C, C102T Cytochrome c peroxidase, mitochondrial × 1 （P00431） HEC HEME C × 2 X-RAY DIFFRACTION X-ray crystallization conditions：VAPOR DIFFUSION, SITTING DROP；298 K；PEG 3350, KI, VAPOR DIFFUSION, SITTING DROP, temperature 298K Resolution 1.88 Å R-free 0.243

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 1S6V Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
1CHH STRUCTURAL STUDIES OF THE ROLES OF RESIDUES 82 AND 85 AT THE INTERACTIVE FACE OF CYTOCHROME C Deposited 1994-06-01 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain A 1–108（108 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 2 HEC HEME C × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 1.97 Å
1CHI STRUCTURAL STUDIES OF THE ROLES OF RESIDUES 82 AND 85 AT THE INTERACTIVE FACE OF CYTOCHROME C Deposited 1994-06-01 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain A 1–108（108 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 2 HEC HEME C × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.00 Å
1CHJ STRUCTURAL STUDIES OF THE ROLES OF RESIDUES 82 AND 85 AT THE INTERACTIVE FACE OF CYTOCHROME C Deposited 1994-06-01 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain A 1–108（108 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 2 HEC HEME C × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 1.90 Å
1CIE STRUCTURAL AND FUNCTIONAL EFFECTS OF MULTIPLE MUTATIONS AT DISTAL SITES IN CYTOCHROME C Deposited 1994-09-26 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain A 1–108（108 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 2 HEC HEME C × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 1.80 Å
1CIF STRUCTURAL AND FUNCTIONAL EFFECTS OF MULTIPLE MUTATIONS AT DISTAL SITES IN CYTOCHROME C Deposited 1994-09-26 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain A 1–108（108 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 2 HEC HEME C × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 1.90 Å
1CIG STRUCTURAL AND FUNCTIONAL EFFECTS OF MULTIPLE MUTATIONS AT DISTAL SITES IN CYTOCHROME C Deposited 1994-09-26 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 1–108（108 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 1 HEC HEME C × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 1.80 Å
1CIH STRUCTURAL AND FUNCTIONAL EFFECTS OF MULTIPLE MUTATIONS AT DISTAL SITES IN CYTOCHROME C Deposited 1994-09-26 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain A 1–108（108 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 2 HEC HEME C × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 1.80 Å
1CRG THE ROLE OF A CONSERVED INTERNAL WATER MOLECULE AND ITS ASSOCIATED HYDROGEN BOND NETWORK IN CYTOCHROME C Deposited 1993-08-06 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 1–108（108 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 1 HEC HEME C × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.00 Å
1CRH THE ROLE OF A CONSERVED INTERNAL WATER MOLECULE AND ITS ASSOCIATED HYDROGEN BOND NETWORK IN CYTOCHROME C Deposited 1993-08-06 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 1–108（108 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 1 HEC HEME C × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 1.90 Å
1CRI THE ROLE OF A CONSERVED INTERNAL WATER MOLECULE AND ITS ASSOCIATED HYDROGEN BOND NETWORK IN CYTOCHROME C Deposited 1993-08-06 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 1–108（108 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.00 Å
1CRJ THE ROLE OF A CONSERVED INTERNAL WATER MOLECULE AND ITS ASSOCIATED HYDROGEN BOND NETWORK IN CYTOCHROME C Deposited 1993-08-06 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain A 1–108（108 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 2 HEC HEME C × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.05 Å
1CSU REPLACEMENTS IN A CONSERVED LEUCINE CLUSTER IN THE HYDROPHOBIC HEME POCKET OF CYTOCHROME C Deposited 1994-10-04 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain A 1–108（108 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 2 HEC HEME C × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 1.81 Å
1CSV REPLACEMENTS IN A CONSERVED LEUCINE CLUSTER IN THE HYDROPHOBIC HEME POCKET OF CYTOCHROME C Deposited 1994-10-04 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 1–108（108 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 1 HEC HEME C × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 1.90 Å
1CSW REPLACEMENTS IN A CONSERVED LEUCINE CLUSTER IN THE HYDROPHOBIC HEME POCKET OF CYTOCHROME C Deposited 1994-10-04 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 1–108（108 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 1 HEC HEME C × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 1.90 Å
1CSX REPLACEMENTS IN A CONSERVED LEUCINE CLUSTER IN THE HYDROPHOBIC HEME POCKET OF CYTOCHROME C Deposited 1994-10-04 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 1–108（108 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 1 HEC HEME C × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 1.90 Å
1CTY MUTATION OF TYROSINE-67 IN CYTOCHROME C SIGNIFICANTLY ALTERS THE LOCAL HEME ENVIRONMENT Deposited 1993-02-15 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 1–108（108 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 1 HEC HEME C × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.20 Å
1CTZ MUTATION OF TYROSINE-67 IN CYTOCHROME C SIGNIFICANTLY ALTERS THE LOCAL HEME ENVIRONMENT Deposited 1993-02-15 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 1–108（108 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 1 HEC HEME C × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 1.90 Å
1FHB THREE-DIMENSIONAL SOLUTION STRUCTURE OF THE CYANIDE ADDUCT OF A MET80ALA VARIANT OF SACCHAROMYCES CEREVISIAE ISO-1-CYTOCHROME C. IDENTIFICATION OF LIGAND-RESIDUE INTERACTIONS IN THE DISTAL HEME CAVITY Deposited 1995-06-16 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 1–108（108 aa）
Mutation：H39Q, M80A, C102S Non-standard monomer：Yes (specific site not provided by mmCIF) CYN CYANIDE ION × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 SOLUTION NMR mmCIF provides none of the parsed conditions Resolution not provided
1IRV CYTOCHROME C ISOZYME 1, REDUCED, MUTANT WITH ILE 75 REPLACED BY MET AND CYS 102 REPLACED BY THR Deposited 1996-06-27 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 1–108（108 aa）
Mutation：I75M, C102T Non-standard monomer：Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 1.90 Å
1IRW CYTOCHROME C ISOZYME 1, REDUCED, MUTANT WITH ASN 52 REPLACED BY ALA AND CYS 102 REPLACED BY THR Deposited 1996-06-27 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 1–108（108 aa）
Mutation：N52A, C102T Non-standard monomer：Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.00 Å
1KYO YEAST CYTOCHROME BC1 COMPLEX WITH BOUND SUBSTRATE CYTOCHROME C Deposited 2002-02-05 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 23 PDB declaration: 23-meric
Chain W 1–108（108 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) HEC HEME C × 7 SMA STIGMATELLIN A × 2 FES FE2/S2 (INORGANIC) CLUSTER × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.5；277 K；PEG4000, 20 mM Tris, 0.05 % Undecyl-maltopyranoside, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Resolution 2.97 Å R-free 0.268
1LMS Structural model for an alkaline form of ferricytochrome c Deposited 2002-05-02 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 1–108（108 aa）
Mutation：K72A,K79A,C102T HEC HEME C × 1 SOLUTION NMR
NMR measurement conditions pH 11.1；298 K；Ionic strength (raw mmCIF value) 50 mM phosphate；Pressure 1
NMR sample composition 2mM protein | 50 mM phosphate buffer; 90% H2O, 10% D2O; pH 11.1
Resolution not provided
1NMI Solution structure of the imidazole complex of iso-1 cytochrome c Deposited 2003-01-10 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 1–108（108 aa）
Not recorded IMD IMIDAZOLE × 1 HEC HEME C × 1 SOLUTION NMR
NMR measurement conditions pH 7；298 K
NMR sample composition 1mM iso-1 cytochrome c, 120mM d5imidazole | H2O
NMR sample composition 1mM 15N labeled iso-1 cytochrome c, 120mM d5imidazole | H2O
Resolution not provided
1RAP THE STRUCTURE AND FUNCTION OF OMEGA LOOP A REPLACEMENTS IN CYTOCHROME C Deposited 1992-08-25 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain A 1–108（108 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 2 HEM PROTOPORPHYRIN IX CONTAINING FE × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.25 Å
1RAQ THE STRUCTURE AND FUNCTION OF OMEGA LOOP A REPLACEMENTS IN CYTOCHROME C Deposited 1992-08-25 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain A 1–108（108 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 2 HEC HEME C × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 1.90 Å
1U74 Electron Transfer Complex between cytochrome C and cytochrome C peroxidase Deposited 2004-08-02 Different construct Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain B 1–108（108 aa）
Mutation：C102S PO4 PHOSPHATE ION × 1 ZNH PROTOPORPHYRIN IX CONTAINING ZN × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；PEG 3350, sodium chloride, n-octyl-beta-D-glucoside, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
Resolution 2.40 Å R-free 0.287
1U74 Electron Transfer Complex between cytochrome C and cytochrome C peroxidase Deposited 2004-08-02 Different construct Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain D 1–108（108 aa）
Mutation：C102S PO4 PHOSPHATE ION × 1 ZNH PROTOPORPHYRIN IX CONTAINING ZN × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7；298 K；PEG 3350, sodium chloride, n-octyl-beta-D-glucoside, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K
Resolution 2.40 Å R-free 0.287
1YCC HIGH-RESOLUTION REFINEMENT OF YEAST ISO-1-CYTOCHROME C AND COMPARISONS WITH OTHER EUKARYOTIC CYTOCHROMES C Deposited 1990-05-09 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain A 1–108（108 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 2 HEC HEME C × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 1.23 Å
1YFC Solution nmr structure of a yeast iso-1-ferrocytochrome C Deposited 1996-08-08 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 1–108（108 aa）
Mutation：C102S Non-standard monomer：Yes (specific site not provided by mmCIF) HEC HEME C × 1 SOLUTION NMR
NMR measurement conditions pH 7；303 K
Resolution not provided
1YIC THE OXIDIZED SACCHAROMYCES CEREVISIAE ISO-1-CYTOCHROME C, NMR, 20 STRUCTURES Deposited 1997-02-18 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 1–108（108 aa）
Mutation：C102S Non-standard monomer：Yes (specific site not provided by mmCIF) HEC HEME C × 1 SOLUTION NMR mmCIF provides none of the parsed conditions Resolution not provided
2B0Z Crystal structure of the protein-protein complex between F82I cytochrome c and cytochrome c peroxidase Deposited 2005-09-15 Different construct Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain B 1–108（108 aa）
Mutation：F82I ZNH PROTOPORPHYRIN IX CONTAINING ZN × 1 HEC HEME C × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.70 Å R-free 0.289
2B10 Crystal Structure of the Protein-Protein Complex between F82S cytochrome c and cytochrome c peroxidase Deposited 2005-09-15 Different construct Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain B 1–108（108 aa）
Mutation：F82S ZNH PROTOPORPHYRIN IX CONTAINING ZN × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 7；298 K；PEG 3350, NaCl, BOG, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Resolution 2.80 Å R-free 0.306
2B10 Crystal Structure of the Protein-Protein Complex between F82S cytochrome c and cytochrome c peroxidase Deposited 2005-09-15 Different construct Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain D 1–108（108 aa）
Mutation：F82S ZNH PROTOPORPHYRIN IX CONTAINING ZN × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 7；298 K；PEG 3350, NaCl, BOG, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Resolution 2.80 Å R-free 0.306
2B11 Crystal structure of the protein-protein complex between F82W cytochrome c and cytochrome c peroxidase Deposited 2005-09-15 Different construct Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain B 1–108（108 aa）
Mutation：F82W ZNH PROTOPORPHYRIN IX CONTAINING ZN × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 7；298 K；PEG 3350, NaCl, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Resolution 2.30 Å R-free 0.293
2B11 Crystal structure of the protein-protein complex between F82W cytochrome c and cytochrome c peroxidase Deposited 2005-09-15 Different construct Different mutation/modification Different experimental conditions Different structure-quality metrics Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain D 1–108（108 aa）
Mutation：F82W HEC HEME C × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 7；298 K；PEG 3350, NaCl, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Resolution 2.30 Å R-free 0.293
2B12 Crystal structure of the protein-protein complex between F82Y cytochrome c and cytochrome c peroxidase Deposited 2005-09-15 Different construct Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain B 1–108（108 aa）
Mutation：F82Y ZNH PROTOPORPHYRIN IX CONTAINING ZN × 1 HEC HEME C × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 7；298 K；PEG 3350, NaCl, BOG, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Resolution 3.02 Å R-free 0.268
2BCN Solvent isotope effects on interfacial protein electron transfer between cytochrome c and cytochrome c peroxidase Deposited 2005-10-19 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 3 PDB declaration: trimeric
Chain B 1–108（108 aa）
Mutation：C107S ZNH PROTOPORPHYRIN IX CONTAINING ZN × 2 HEC HEME C × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 7.2；295 K；PEG3350, NaCl, BOG, pH 7.2, VAPOR DIFFUSION, SITTING DROP, temperature 295K
Resolution 1.70 Å R-free 0.230
2GB8 Solution structure of the complex between yeast iso-1-cytochrome c and yeast cytochrome c peroxidase Deposited 2006-03-10 Different construct Different mutation/modification Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain B 1–108（108 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 1 HEC HEME C × 1 SOLUTION NMR
NMR measurement conditions pH 6；301 K；Ionic strength (raw mmCIF value) 120mM；Pressure ambient
NMR sample composition 0.3-0.4mM Cc(Fe3+)-CcP(Fe3+), 1:1 complex; 20mM NaPi, 100mM NaCl pH 6.0 | 20mM NaPi, 100mM NaCl pH 6.0
Resolution not provided
2HV4 NMR solution structure refinement of yeast iso-1-ferrocytochrome c Deposited 2006-07-27 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 1–108（108 aa）
Mutation：C102T HEC HEME C × 1 SOLUTION NMR
NMR measurement conditions pH 7；303 K；Ionic strength (raw mmCIF value) 50 mM phosphate buffer；Pressure ambient
NMR sample composition 2-3 mM cytochrome c, 50 mM phosphate buffer, pH 7.0, 90% H2O, 10% D2O | 90% H2O/10% D2O
NMR sample composition 2-3 mM cytochrome c U-15N, 50 mM phosphate buffer, pH 7.0, 90% H2O, 10% D2O | 90% H2O/10% D2O
NMR sample composition 2-3 mM cytochrome c U-15N,13C, 50 mM phosphate buffer, pH 7.0, 90% H2O, 10% D2O | 90% H2O/10% D2O
Resolution not provided
2JQR Solution model of crosslinked complex of cytochrome c and adrenodoxin Deposited 2007-06-07 Different construct Different mutation/modification Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain A 2–109（108 aa）
Mutation：V28C, C102T HEC HEME C × 1 FES FE2/S2 (INORGANIC) CLUSTER × 1 SOLUTION NMR
NMR measurement conditions pH 7.4；285 K；Pressure ambient
NMR measurement conditions pH 7.4；301 K；Ionic strength (raw mmCIF value) 0.4；Pressure ambient
NMR sample composition 0.4 mM [U-98% 15N] CcV28C, 0.2-0.6 mM AdxL80C, 20 mM potassium phosphate, 95% H2O/5% D2O | 95% H2O/5% D2O
NMR sample composition 0.4 mM [U-98% 15N] AdxL80C, 0.2-0.6 mM CcV28C, 20 mM potassium phosphate, 95% H2O/5% D2O | 95% H2O/5% D2O
NMR sample composition 1.0 mM [U-98% 15N] CcV28C, 5 mM DTT, 20 mM potassium phosphate, 95% H2O/5% D2O | 95% H2O/5% D2O
NMR sample composition 0.6 mM [U-98% 15N] AdxL80C, 5 mM DTT, 20 mM potassium phosphate, 95% H2O/5% D2O | 95% H2O/5% D2O
Resolution not provided
2JTI Solution structure of the yeast iso-1-cytochrome c (T12A) : yeast cytochrome c peroxidase complex Deposited 2007-08-01 Different construct Different mutation/modification Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain B 2–109（108 aa）
Mutation：T12A,C102T HEM PROTOPORPHYRIN IX CONTAINING FE × 1 HEC HEME C × 1 SOLUTION NMR
NMR measurement conditions pH 6；303 K；Pressure ambient
NMR sample composition 0.3-0.4 mM [U-15N] CC, 0.3-0.4 mM CCP, 93% H2O/7% D2O | 93% H2O/7% D2O
Resolution not provided
2LIR NMR Solution Structure of Yeast Iso-1-cytochrome c Mutant P71H in oxidized states Deposited 2011-08-31 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 2–109（108 aa）
Mutation：P71H, K72A, C102T HEC HEME C × 1 SOLUTION NMR
NMR measurement conditions pH 7；293 K；Ionic strength (raw mmCIF value) 50mM；Pressure ambient
NMR sample composition 1 mM entity_1-1, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition 1 mM entity_1-2, 100% D2O | 100% D2O
Resolution not provided
2LIT NMR Solution Structure of Yeast Iso-1-cytochrome c Mutant P71H in reduced states Deposited 2011-08-31 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 2–109（108 aa）
Mutation：P71H, K72A, C102T HEC HEME C × 1 SOLUTION NMR
NMR measurement conditions pH 7；293 K；Ionic strength (raw mmCIF value) 50mM；Pressure ambient
NMR sample composition 1 mM entity_1-1, 90% H2O/10% D2O | 90% H2O/10% D2O
NMR sample composition 1 mM entity_1-2, 100% D2O | 100% D2O
Resolution not provided
2MHM Solution structure of cytochrome c Y67H Deposited 2013-11-26 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 2–109（108 aa）
Mutation：Y67H HEC HEME C × 1 SOLUTION NMR
NMR measurement conditions pH 7；293 K；Ionic strength (raw mmCIF value) 50；Pressure 1
NMR sample composition 1 mM cytc c y67h-1, 90% H2O, 10% D2O | 90% H2O/10% D2O
NMR sample composition 1 mM cytc c y67h-2, 100% D2O | 100% D2O
Resolution not provided
2N18 Dominant form of the low-affinity complex of yeast cytochrome c and cytochrome c peroxidase Deposited 2015-03-24 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 3 PDB declaration: trimeric
Chain B 3–109（107 aa） Fragment：UNP residues 3-109
Chain C 2–109（108 aa） Fragment：UNP residues 2-109
Mutation：A81C, C102T HEM PROTOPORPHYRIN IX CONTAINING FE × 1 HEC HEME C × 2 SOLUTION NMR
NMR measurement conditions pH 6；298 K；Ionic strength (raw mmCIF value) 15；Pressure ambient
NMR sample composition 0.4 mM [U-2H; U-15N] CcP, 0.4 mM Cc, 0.4 mM Cc1, 20 mM sodium phosphate, 93% H2O/7% D2O | 93% H2O/7% D2O
Resolution not provided
2ORL Solution structure of the cytochrome c- para-aminophenol adduct Deposited 2007-02-03 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental method Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 2–109（108 aa）
Mutation：C102T HEC HEME C × 1 4NL 4-AMINOPHENOL × 1 SOLUTION NMR
NMR measurement conditions pH 7；303 K；Ionic strength (raw mmCIF value) 50 mM phosphate buffer；Pressure 1
NMR sample composition 2-3mM Cytochrome c U-15N, 50mM phosphate buffer, pH 7.0, 90% H2O, 10% D2O | 90% H2O/10% D2O
Resolution not provided
2PCC CRYSTAL STRUCTURE OF A COMPLEX BETWEEN ELECTRON TRANSFER PARTNERS, CYTOCHROME C PEROXIDASE AND CYTOCHROME C Deposited 1993-04-14 Different construct Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain B 1–108（108 aa）
Not recorded SO4 SULFATE ION × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.30 Å
2PCC CRYSTAL STRUCTURE OF A COMPLEX BETWEEN ELECTRON TRANSFER PARTNERS, CYTOCHROME C PEROXIDASE AND CYTOCHROME C Deposited 1993-04-14 Different construct Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain D 1–108（108 aa）
Not recorded SO4 SULFATE ION × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 2 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 2.30 Å
2YCC OXIDATION STATE-DEPENDENT CONFORMATIONAL CHANGES IN CYTOCHROME C Deposited 1991-01-29 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 1–108（108 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) SO4 SULFATE ION × 1 HEC HEME C × 1 X-RAY DIFFRACTION mmCIF provides none of the parsed conditions Resolution 1.90 Å
3CX5 Structure of complex III with bound cytochrome c in reduced state and definition of a minimal core interface for electron transfer. Deposited 2008-04-23 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Other combination Heteromer；Protein × 23 PDB declaration: 23-meric
Chain W 2–109（108 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) 6PH (1R)-2-(phosphonooxy)-1-[(tridecanoyloxy)methyl]ethyl pentadecanoate × 2 UMQ UNDECYL-MALTOSIDE × 2 HEM PROTOPORPHYRIN IX CONTAINING FE × 7 SMA STIGMATELLIN A × 2 8PE (2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradecanoyloxy)propyl octadecanoate × 2 9PE (1R)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(heptanoyloxy)methyl]ethyl octadecanoate × 2 CN5 (5S,11R)-5,8,11-trihydroxy-5,11-dioxido-17-oxo-4,6,10,12,16-pentaoxa-5,11-diphosphaoctadec-1-yl pentadecanoate × 1 7PH (1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate × 2 CN3 (2R,5S,11R,14R)-5,8,11-trihydroxy-2-(nonanoyloxy)-5,11-dioxido-16-oxo-14-[(propanoyloxy)methyl]-4,6,10,12,15-pentaoxa-5,11-diphosphanonadec-1-yl undecanoate × 2 FES FE2/S2 (INORGANIC) CLUSTER × 2 X-RAY DIFFRACTION
X-ray crystallization conditions Microbatch (paraffin oil)；pH 7.5；277 K；1M Sucrose, 10% DMSO, 20mM Tris pH 7.5, 80mM NaCl, 0.05 % UM, 1 M stigmatellin, 5% PEG 4000, Microbatch (paraffin oil), temperature 277K
Resolution 1.90 Å R-free 0.263
3TYI Crystal Structure of Cytochrome c - p-Sulfonatocalix[4]arene Complexes Deposited 2011-09-26 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 2–109（108 aa）
Mutation：C102T HEM PROTOPORPHYRIN IX CONTAINING FE × 1 T3Y 25,26,27,28-tetrahydroxypentacyclo[19.3.1.1~3,7~.1~9,13~.1~15,19~]octacosa-1(25),3(28),4,6,9(27),10,12,15(26),16,18,21,23-dodecaene-5,11,17,23-tetrasulfonic acid × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6.3；293.15 K；26 % PEG 8000, 100 mM Magnesium Chloride, 50 mM Sodium Chloride, 50 mM Sodium Cacodylate pH 6.3, VAPOR DIFFUSION, HANGING DROP, temperature 293.15K
Resolution 1.40 Å R-free 0.198
3TYI Crystal Structure of Cytochrome c - p-Sulfonatocalix[4]arene Complexes Deposited 2011-09-26 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain B 2–109（108 aa）
Mutation：C102T HEM PROTOPORPHYRIN IX CONTAINING FE × 1 T3Y 25,26,27,28-tetrahydroxypentacyclo[19.3.1.1~3,7~.1~9,13~.1~15,19~]octacosa-1(25),3(28),4,6,9(27),10,12,15(26),16,18,21,23-dodecaene-5,11,17,23-tetrasulfonic acid × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6.3；293.15 K；26 % PEG 8000, 100 mM Magnesium Chloride, 50 mM Sodium Chloride, 50 mM Sodium Cacodylate pH 6.3, VAPOR DIFFUSION, HANGING DROP, temperature 293.15K
Resolution 1.40 Å R-free 0.198
4MU8 Crystal structure of an oxidized form of yeast iso-1-cytochrome c at pH 8.8 Deposited 2013-09-20 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 2–109（108 aa）
Mutation：K78A, C108S HEC HEME C × 1 SO4 SULFATE ION × 4 TBU TERTIARY-BUTYL ALCOHOL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 8.8；293 K；90% ammonia sulfate, 0.1 M Tris-HCl (pH 8.8), 4% tert-butanol, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Resolution 1.45 Å R-free 0.154
4MU8 Crystal structure of an oxidized form of yeast iso-1-cytochrome c at pH 8.8 Deposited 2013-09-20 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain B 2–109（108 aa）
Mutation：K78A, C108S HEC HEME C × 1 SO4 SULFATE ION × 4 TBU TERTIARY-BUTYL ALCOHOL × 2 GOL GLYCEROL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 8.8；293 K；90% ammonia sulfate, 0.1 M Tris-HCl (pH 8.8), 4% tert-butanol, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Resolution 1.45 Å R-free 0.154
4N0K Atomic resolution crystal structure of a cytochrome c-calixarene complex Deposited 2013-10-02 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 2–107（106 aa）
Mutation：R13E HEC HEME C × 1 T3Y 25,26,27,28-tetrahydroxypentacyclo[19.3.1.1~3,7~.1~9,13~.1~15,19~]octacosa-1(25),3(28),4,6,9(27),10,12,15(26),16,18,21,23-dodecaene-5,11,17,23-tetrasulfonic acid × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6；293.15 K；18 % PEG 8000, 50 mM NaCl, 100 mM MgCl2, 50 mM sodium cacodylate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293.15K
Resolution 1.05 Å R-free 0.180
4N0K Atomic resolution crystal structure of a cytochrome c-calixarene complex Deposited 2013-10-02 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain B 2–107（106 aa）
Mutation：R13E HEC HEME C × 1 T3Y 25,26,27,28-tetrahydroxypentacyclo[19.3.1.1~3,7~.1~9,13~.1~15,19~]octacosa-1(25),3(28),4,6,9(27),10,12,15(26),16,18,21,23-dodecaene-5,11,17,23-tetrasulfonic acid × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6；293.15 K；18 % PEG 8000, 50 mM NaCl, 100 mM MgCl2, 50 mM sodium cacodylate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293.15K
Resolution 1.05 Å R-free 0.180
4P4Q Complex of yeast cytochrome c peroxidase (W191F) with iso-1 cytochrome c Deposited 2014-03-12 Different construct Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain B 7–109（103 aa） Fragment：UNP residues 7-109
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；298 K；PEG 3350 15-15%, 100 mM NaAcetate, 175 mM NaCl
Resolution 2.01 Å R-free 0.278
4P4Q Complex of yeast cytochrome c peroxidase (W191F) with iso-1 cytochrome c Deposited 2014-03-12 Different construct Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain D 7–109（103 aa） Fragment：UNP residues 7-109
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；298 K；PEG 3350 15-15%, 100 mM NaAcetate, 175 mM NaCl
Resolution 2.01 Å R-free 0.278
4Q5P Lysine-Ligated Yeast Iso-1 Cytochrome C Deposited 2014-04-17 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain A 4–109（106 aa） Fragment：UNP residues 7-109
Mutation：T78C, K79G HEM PROTOPORPHYRIN IX CONTAINING FE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 8；291 K；0.2 M ammonium phosphate, pH 8.1, 30% w/v PEG300, 0.1 M Tris, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Resolution 1.87 Å R-free 0.204
4Q5P Lysine-Ligated Yeast Iso-1 Cytochrome C Deposited 2014-04-17 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain B 4–109（106 aa） Fragment：UNP residues 7-109
Mutation：T78C, K79G HEM PROTOPORPHYRIN IX CONTAINING FE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 8；291 K；0.2 M ammonium phosphate, pH 8.1, 30% w/v PEG300, 0.1 M Tris, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Resolution 1.87 Å R-free 0.204
4Q5P Lysine-Ligated Yeast Iso-1 Cytochrome C Deposited 2014-04-17 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 3 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain C 4–109（106 aa） Fragment：UNP residues 7-109
Mutation：T78C, K79G HEM PROTOPORPHYRIN IX CONTAINING FE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 8；291 K；0.2 M ammonium phosphate, pH 8.1, 30% w/v PEG300, 0.1 M Tris, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Resolution 1.87 Å R-free 0.204
4QAO Lysine-ligated cytochrome c with F82H Deposited 2014-05-05 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain A 4–107（104 aa） Fragment：UNP residues 8-109
Mutation：T78C, K79G, F82H HEM PROTOPORPHYRIN IX CONTAINING FE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 8；291 K；28% w/v PEG, 0.3 M ammonium phosphate, 0.1 M Tris, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Resolution 2.10 Å R-free 0.223
4QAO Lysine-ligated cytochrome c with F82H Deposited 2014-05-05 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain B 4–107（104 aa） Fragment：UNP residues 8-109
Mutation：T78C, K79G, F82H HEM PROTOPORPHYRIN IX CONTAINING FE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 8；291 K；28% w/v PEG, 0.3 M ammonium phosphate, 0.1 M Tris, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Resolution 2.10 Å R-free 0.223
4QAO Lysine-ligated cytochrome c with F82H Deposited 2014-05-05 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 3 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain C 4–107（104 aa） Fragment：UNP residues 8-109
Mutation：T78C, K79G, F82H HEM PROTOPORPHYRIN IX CONTAINING FE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 8；291 K；28% w/v PEG, 0.3 M ammonium phosphate, 0.1 M Tris, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Resolution 2.10 Å R-free 0.223
4YE1 A cytochrome c plus calixarene structure - alternative ligand binding mode Deposited 2015-02-23 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 2–109（108 aa）
Mutation：R13E HEC HEME C × 1 T3Y 25,26,27,28-tetrahydroxypentacyclo[19.3.1.1~3,7~.1~9,13~.1~15,19~]octacosa-1(25),3(28),4,6,9(27),10,12,15(26),16,18,21,23-dodecaene-5,11,17,23-tetrasulfonic acid × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6；293.15 K；18 % PEG 8000, 50 mM NaCl, 100 mM MgCl2, 50 mM sodium cacodylate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293.15K
Resolution 1.39 Å R-free 0.160
4YE1 A cytochrome c plus calixarene structure - alternative ligand binding mode Deposited 2015-02-23 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain B 2–109（108 aa）
Mutation：R13E HEC HEME C × 1 T3Y 25,26,27,28-tetrahydroxypentacyclo[19.3.1.1~3,7~.1~9,13~.1~15,19~]octacosa-1(25),3(28),4,6,9(27),10,12,15(26),16,18,21,23-dodecaene-5,11,17,23-tetrasulfonic acid × 2 GOL GLYCEROL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6；293.15 K；18 % PEG 8000, 50 mM NaCl, 100 mM MgCl2, 50 mM sodium cacodylate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 293.15K
Resolution 1.39 Å R-free 0.160
5CIB Complex of yeast cytochrome c peroxidase (W191G) bound to 2,4-dimethylaniline with iso-1 cytochrome c Deposited 2015-07-11 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 4 PDB declaration: tetrameric
Chain B 2–109（108 aa） Fragment：iso-1 cytochrome c
Chain D 2–109（108 aa） Fragment：iso-1 cytochrome c
Not recorded HEC HEME C × 4 51S 2,4-dimethylaniline × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；298 K；PEG 3350 15-15%, 100 mM NaAcetate, 175 mM NaCl
Resolution 3.01 Å R-free 0.304
5CIC Complex of yeast cytochrome c peroxidase (W191G) bound to 3-aminobenzotrifluoride with iso-1 cytochrome c Deposited 2015-07-11 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 4 PDB declaration: tetrameric
Chain B 2–109（108 aa）
Chain D 2–109（108 aa）
Not recorded HEC HEME C × 4 51R 3-(trifluoromethyl)aniline × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；289 K；PEG 3350 15-15%, 100 mM NaAcetate, 175 mM NaCl
Resolution 2.10 Å R-free 0.228
5CID Complex of yeast cytochrome c peroxidase (W191G) bound to o-toluidine with iso-1 cytochrome c Deposited 2015-07-12 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 4 PDB declaration: tetrameric
Chain B 2–109（108 aa）
Chain D 2–109（108 aa）
Not recorded HEC HEME C × 4 51V 2-methylaniline × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；298 K；PEG 3350 15-15%, 100 mM NaAcetate, 175 mM NaCl
Resolution 2.76 Å R-free 0.268
5CIE Complex of yeast cytochrome c peroxidase (W191G) bound to aniline with iso-1 cytochrome c Deposited 2015-07-12 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 4 PDB declaration: tetrameric
Chain B 2–109（108 aa）
Chain D 2–109（108 aa）
Not recorded HEC HEME C × 4 ANL ANILINE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；298 K；PEG 3350 15-15%, 100 mM NaAcetate, 175 mM NaCl
Resolution 2.60 Å R-free 0.294
5CIF Complex of yeast cytochrome c peroxidase (W191F) with iso-1 cytochrome c Deposited 2015-07-12 Different construct Different mutation/modification Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain B 7–109（103 aa）
Not recorded HEC HEME C × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；298 K；PEG 3350 15-15%, 100 mM NaAcetate, 175 mM NaCl
Resolution 2.01 Å R-free 0.268
5CIF Complex of yeast cytochrome c peroxidase (W191F) with iso-1 cytochrome c Deposited 2015-07-12 Different construct Different mutation/modification Different experimental conditions Different structure-quality metrics Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain D 7–109（103 aa）
Not recorded HEC HEME C × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；298 K；PEG 3350 15-15%, 100 mM NaAcetate, 175 mM NaCl
Resolution 2.01 Å R-free 0.268
5CIG Complex of yeast cytochrome c peroxidase (W191G) with iso-1 cytochrome c Deposited 2015-07-12 Different construct Different mutation/modification Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain B 2–109（108 aa）
Not recorded HEC HEME C × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；289 K；PEG 3350 15-15%, 100 mM NaAcetate, 175 mM NaCl
Resolution 2.06 Å R-free 0.298
5CIG Complex of yeast cytochrome c peroxidase (W191G) with iso-1 cytochrome c Deposited 2015-07-12 Different construct Different mutation/modification Different experimental conditions Different structure-quality metrics Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain D 2–109（108 aa）
Not recorded HEC HEME C × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；289 K；PEG 3350 15-15%, 100 mM NaAcetate, 175 mM NaCl
Resolution 2.06 Å R-free 0.298
5CIH Complex of yeast cytochrome c peroxidase (W191Y) with iso-1 cytochrome c Deposited 2015-07-12 Different construct Different mutation/modification Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain B 7–109（103 aa）
Not recorded HEC HEME C × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；298 K；PEG 3350 15-15%, 100 mM NaAcetate, 175 mM NaCl
Resolution 2.60 Å R-free 0.310
5CIH Complex of yeast cytochrome c peroxidase (W191Y) with iso-1 cytochrome c Deposited 2015-07-12 Different construct Different mutation/modification Different experimental conditions Different structure-quality metrics Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain D 7–109（103 aa）
Not recorded HEC HEME C × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；298 K；PEG 3350 15-15%, 100 mM NaAcetate, 175 mM NaCl
Resolution 2.60 Å R-free 0.310
5KKE Crystal Structure of a Domain-swapped Dimer of Yeast Iso-1-cytochrome c with CYMAL5 Deposited 2016-06-21 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain A 2–109（108 aa）
Mutation：K72A, C102S HEC HEME C × 2 SO4 SULFATE ION × 4 CM5 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE × 2 CL CHLORIDE ION × 2 GOL GLYCEROL × 4 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 7.5；295 K；Reservior solution: 77% Ammonium Sulfate, 0.1 M Tris, pH 7.5 Protein Solution: 18 mg/mL in 75 % Ammonium Sulfate Detergent Solution: 2.5 mM CYMAL-5 in deionized water Mixed 2:2:1
Resolution 1.70 Å R-free 0.204
5KLU Crystal Structure of a Domain-swapped Dimer of Yeast Iso-1-cytochrome c with omega-undecylenyl-beta-D-maltopyranoside Deposited 2016-06-25 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain A 4–109（106 aa）
Chain B 4–109（106 aa）
Mutation：K72A, C102S Mutation：K72A, C102S HEC HEME C × 2 6UZ omega-undecylenyl-beta-D-maltopyranoside × 2 SO4 SULFATE ION × 4 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 7.5；295 K；Reservior: 90% ammonium sulfate, 0.1 M Tris, pH 7.5 Protein: 8 mg/mL in 75% ammonium sulfate Detergent: 12 mM w-undecylenyl-b-D-maltopyranoside in deionized water Mixed 2:2:1
Resolution 1.99 Å R-free 0.256
5KPF Crystal structure of cytochrome c - Phenyl-trisulfonatocalix[4]arene complex Deposited 2016-07-04 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 3–109（107 aa）
Not recorded HEC HEME C × 1 NO3 NITRATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；293.15 K；20 mM PEG 3350, 200 mM Ammonium Nitrate pH 6.3 cyt c-sclx4 seed (grown in 18% PEG 8000, 50 mM NaCl, 100 mM MgCl2, 50 mM NaOAc pH 5.6)
Resolution 1.70 Å R-free 0.207
5KPF Crystal structure of cytochrome c - Phenyl-trisulfonatocalix[4]arene complex Deposited 2016-07-04 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain B 3–109（107 aa）
Not recorded HEC HEME C × 1 6VJ Phenyl-trisulfonatocalix[4]arene × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；293.15 K；20 mM PEG 3350, 200 mM Ammonium Nitrate pH 6.3 cyt c-sclx4 seed (grown in 18% PEG 8000, 50 mM NaCl, 100 mM MgCl2, 50 mM NaOAc pH 5.6)
Resolution 1.70 Å R-free 0.207
5LFT Crystal structure of cytochrome c - Bromo-trisulfonatocalix[4]arene complexes Deposited 2016-07-04 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 3–109（107 aa）
Not recorded HEC HEME C × 1 BR BROMIDE ION × 2 6VB Bromo-trisulfonatocalix[4]arene × 3 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；293.15 K；30% PEG 8000, 50 mM NaCl, 100 mM MgCl2, 50 mM NaOAc pH 5.6
Resolution 1.25 Å R-free 0.239
5LYC Cytochrome c in complex with phosphonato-calix[6]arene Deposited 2016-09-27 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain A 3–109（107 aa）
Chain B 3–109（107 aa）
Mutation：C102T Mutation：C102T HEC HEME C × 2 7AZ phosphonato-calix[6]arene × 2 SO4 SULFATE ION × 5 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 5；293 K；3.15M ammonium sulfate 100 mM sodium citrate pH 5.0
Resolution 1.80 Å R-free 0.199
5NCV Crystal Structure of Cytochrome c in complex with p-Methylphosphonatocalix[4]arene Deposited 2017-03-06 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 3–109（107 aa）
Mutation：T-5A, C102T HEC HEME C × 1 8TE p-Methylphosphonatocalix[4]arene × 2 CL CHLORIDE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 5.6；293 K；20 % PEG 8000, 50 mM NaCl, 50 mM sodium acetate (pH 5.6). [Cytochrome c] = 0.75 mM and [Methylphosphonatocalix[4]arene] = 0.3 mM
Resolution 1.50 Å R-free 0.201
5NCV Crystal Structure of Cytochrome c in complex with p-Methylphosphonatocalix[4]arene Deposited 2017-03-06 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain B 3–109（107 aa）
Mutation：T-5A, C102T HEC HEME C × 1 8TE p-Methylphosphonatocalix[4]arene × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 5.6；293 K；20 % PEG 8000, 50 mM NaCl, 50 mM sodium acetate (pH 5.6). [Cytochrome c] = 0.75 mM and [Methylphosphonatocalix[4]arene] = 0.3 mM
Resolution 1.50 Å R-free 0.201
5T7H Crystal structure of dimeric yeast iso-1-cytochrome C with CYMAL6 Deposited 2016-09-05 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain A 1–109（109 aa）
Chain D 1–109（109 aa）
Mutation：K72A, C10S Mutation：K72A, C10S SO4 SULFATE ION × 4 ZE7 6-cyclohexylhexan-1-ol × 2 HEC HEME C × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.4；293 K；75% (NH4)2SO4, AN 86% (NH4)2SO4 AND 0.1 M TRIS RESERVOIR SOLUTION, AND 5.6 MM CYMAL-6., PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
Resolution 2.00 Å R-free 0.248
5T7H Crystal structure of dimeric yeast iso-1-cytochrome C with CYMAL6 Deposited 2016-09-05 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain B 1–109（109 aa）
Chain C 1–109（109 aa）
Mutation：K72A, C10S Mutation：K72A, C10S SO4 SULFATE ION × 5 ZE7 6-cyclohexylhexan-1-ol × 2 HEC HEME C × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 7.4；293 K；75% (NH4)2SO4, AN 86% (NH4)2SO4 AND 0.1 M TRIS RESERVOIR SOLUTION, AND 5.6 MM CYMAL-6., PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K
Resolution 2.00 Å R-free 0.248
6EGY Crystal structure of cytochrome c in complex with mono-PEGylated sulfonatocalix[4]arene Deposited 2017-09-12 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 2–109（108 aa）
Mutation：C102T HEC HEME C × 1 SO4 SULFATE ION × 1 B4T mono-PEGylated sulfonatocalix[4]arene × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；293 K；1.6 M sodium citrate, 0.1 M Sodium Chloride, and 0.1 M Sodium Sulfate
Resolution 2.70 Å R-free 0.273
6EGY Crystal structure of cytochrome c in complex with mono-PEGylated sulfonatocalix[4]arene Deposited 2017-09-12 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain B 2–109（108 aa）
Mutation：C102T HEC HEME C × 1 B4T mono-PEGylated sulfonatocalix[4]arene × 3 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；293 K；1.6 M sodium citrate, 0.1 M Sodium Chloride, and 0.1 M Sodium Sulfate
Resolution 2.70 Å R-free 0.273
6EGZ Crystal structure of cytochrome c in complex with di-PEGylated sulfonatocalix[4]arene Deposited 2017-09-12 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 2–109（108 aa）
Mutation：C102T HEC HEME C × 1 B4X di-PEGylated sulfonatocalix[4]arene × 1 SO4 SULFATE ION × 1 NA SODIUM ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；293 K；1.6 M Sodium Citrate, 0.1 M Sodium Chloride, 0.1 M Sodium Sulfate
Resolution 2.17 Å R-free 0.247
6EGZ Crystal structure of cytochrome c in complex with di-PEGylated sulfonatocalix[4]arene Deposited 2017-09-12 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain B 2–109（108 aa）
Mutation：C102T HEC HEME C × 1 B4X di-PEGylated sulfonatocalix[4]arene × 3 SO4 SULFATE ION × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；293 K；1.6 M Sodium Citrate, 0.1 M Sodium Chloride, 0.1 M Sodium Sulfate
Resolution 2.17 Å R-free 0.247
6GD6 Cytochrome c in complex with Sulfonato-calix[8]arene, H3 form with ammonium sulfate Deposited 2018-04-23 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 3–109（107 aa）
Mutation：C102T, T-5A HEC HEME C × 1 EVB sulfonato-calix[8]arene × 1 SO4 SULFATE ION × 5 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；293 K；1.75 M ammonium sulfate 0.2 M NaCl (2x protein solution : 1x crystallisation condition)
Resolution 1.20 Å R-free 0.136
6GD7 Cytochrome c in complex with Sulfonato-calix[8]arene, H3 form with PEG Deposited 2018-04-23 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 3–109（107 aa）
Mutation：C102T, T-5A HEC HEME C × 1 EVB sulfonato-calix[8]arene × 1 GOL GLYCEROL × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；293 K；5 % PEG 3350 (2x protein solution : 1x crystallisation condition)
Resolution 1.55 Å R-free 0.183
6GD8 Cytochrome c in complex with Sulfonato-calix[8]arene, P31 form Deposited 2018-04-23 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 3–109（107 aa）
Mutation：C102T, T-5A HEC HEME C × 1 EVB sulfonato-calix[8]arene × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；293 K；24 % PEG 3350 0.27 M NaCl 0.09 M MES pH 5.5 (2x protein solution : 1x crystallisation condition)
Resolution 2.50 Å R-free 0.200
6GD8 Cytochrome c in complex with Sulfonato-calix[8]arene, P31 form Deposited 2018-04-23 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain B 3–109（107 aa）
Mutation：C102T, T-5A HEC HEME C × 1 EVB sulfonato-calix[8]arene × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；293 K；24 % PEG 3350 0.27 M NaCl 0.09 M MES pH 5.5 (2x protein solution : 1x crystallisation condition)
Resolution 2.50 Å R-free 0.200
6GD8 Cytochrome c in complex with Sulfonato-calix[8]arene, P31 form Deposited 2018-04-23 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 3 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain C 3–109（107 aa）
Mutation：C102T, T-5A HEC HEME C × 1 EVB sulfonato-calix[8]arene × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；293 K；24 % PEG 3350 0.27 M NaCl 0.09 M MES pH 5.5 (2x protein solution : 1x crystallisation condition)
Resolution 2.50 Å R-free 0.200
6GD8 Cytochrome c in complex with Sulfonato-calix[8]arene, P31 form Deposited 2018-04-23 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 4 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain D 3–109（107 aa）
Mutation：C102T, T-5A HEC HEME C × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；293 K；24 % PEG 3350 0.27 M NaCl 0.09 M MES pH 5.5 (2x protein solution : 1x crystallisation condition)
Resolution 2.50 Å R-free 0.200
6GD9 Cytochrome c in complex with Sulfonato-calix[8]arene, P43212 form Deposited 2018-04-23 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 3–109（107 aa）
Mutation：C102T, T-5A HEC HEME C × 1 EVB sulfonato-calix[8]arene × 3 EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID × 4 SO4 SULFATE ION × 3 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 6.5；293 K；1.85 M ammonium sulfate 0.1 M HEPES pH 7.0 0.2 M NaCl (2x protein solution : 1x crystallisation condition)
Resolution 2.65 Å R-free 0.286
6GDA Cytochrome c in complex with Sulfonato-calix[8]arene, P43212 form soaked with Spermine Deposited 2018-04-23 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 3–109（107 aa）
Mutation：C102T, T-5A HEC HEME C × 1 EVB sulfonato-calix[8]arene × 3 SO4 SULFATE ION × 9 SPM SPERMINE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；293 K；2.1 M ammonium sulfate 0.1 M MES pH 6.5
Resolution 2.80 Å R-free 0.243
6P41 Yeast cytochrome c peroxidase (W191Y:L232E) in complex with iso-1 cytochrome c Deposited 2019-05-25 Different construct Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain B 7–109（103 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；298 K；100 mM sodium acetate,175 mM NaCl, 5 mM n-octyl-B-D-glucoside, polyethylene glycol 3350 18%-20%
Resolution 2.90 Å R-free 0.273
6P41 Yeast cytochrome c peroxidase (W191Y:L232E) in complex with iso-1 cytochrome c Deposited 2019-05-25 Different construct Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain D 7–109（103 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；298 K；100 mM sodium acetate,175 mM NaCl, 5 mM n-octyl-B-D-glucoside, polyethylene glycol 3350 18%-20%
Resolution 2.90 Å R-free 0.273
6P42 Yeast cytochrome c peroxidase (W191Y:L232H) in complex with iso-1 cytochrome c Deposited 2019-05-25 Different construct Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain B 7–109（103 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；298 K；100 mM sodium acetate,175 mM NaCl, 5 mM n-octyl-B-D-glucoside, polyethylene glycol 3350 18%-20%, L-proline
Resolution 2.90 Å R-free 0.271
6P42 Yeast cytochrome c peroxidase (W191Y:L232H) in complex with iso-1 cytochrome c Deposited 2019-05-25 Different construct Different mutation/modification Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein heterocomplex Heteromer；Protein × 2 PDB declaration: dimeric
Chain D 7–109（103 aa）
Not recorded HEM PROTOPORPHYRIN IX CONTAINING FE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；298 K；100 mM sodium acetate,175 mM NaCl, 5 mM n-octyl-B-D-glucoside, polyethylene glycol 3350 18%-20%, L-proline
Resolution 2.90 Å R-free 0.271
6P43 Yeast cytochrome c peroxidase in complex with iso-1 cytochrome c (Y48K) Deposited 2019-05-25 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein heterocomplex Heteromer；Protein × 3 PDB declaration: trimeric
Chain B 2–109（108 aa）
Mutation：Y48K HEM PROTOPORPHYRIN IX CONTAINING FE × 3 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；298 K；100 mM sodium acetate, 175 mM NaCl, 5 mM n-octyl-B-D-glucoside, polyethylene glycol 3350 14%-20%
Resolution 1.91 Å R-free 0.228
6RGI Partially unfolded cytochrome c in complex with sulfonatocalix[6]arene Deposited 2019-04-16 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 3–109（107 aa）
Not recorded HEC HEME C × 1 FWQ p-sulfonatocalix[6]arene × 1 IMD IMIDAZOLE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 8；293 K；11 % PEG 8000, 0.1 M imidazole, 2 mM sulfonato-calix[6]arene
Resolution 2.64 Å R-free 0.250
6RSI cytochrome c co-crystallized with 25 eq. sulfonato-calix[8]arene - structure 0 Deposited 2019-05-21 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 3–109（107 aa）
Not recorded HEC HEME C × 1 EVB sulfonato-calix[8]arene × 3 GOL GLYCEROL × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；293 K；0.10 M HEPES pH 7.5, 0.15 M NaCl, 2.20 M ammonium sulfate, 0.05 M sulfonato-calix[8]arene.
Resolution 2.48 Å R-free 0.199
6RSJ Cytochrome c co-crystallized with 20 eq. sulfonato-calix[8]arene and soaked with 25 eq. spermine - structure I Deposited 2019-05-21 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 3–109（107 aa）
Not recorded HEC HEME C × 1 EVB sulfonato-calix[8]arene × 3 SPM SPERMINE × 2 SO4 SULFATE ION × 2 GOL GLYCEROL × 5 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；293 K；0.10 M HEPES pH 7.5, 0.15 M NaCl, 2.2 M Ammonium sulfate, 0.04 M sulfonato-calix[8]arene
Resolution 2.27 Å R-free 0.212
6RSK Cytochrome c co-crystallized with 20 eq. sulfonato-calix[8]arene and 15 eq. spermine - structure II Deposited 2019-05-21 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 3–109（107 aa）
Not recorded HEC HEME C × 1 EVB sulfonato-calix[8]arene × 3 SO4 SULFATE ION × 6 SPM SPERMINE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；293 K；0.1 M HEPES pH 7.5, 0.15 M NaCl, 2.2 M Ammonium sulfate, 0.04 M sulfonato-calix[8]arene, 0.03 M spermine
Resolution 2.31 Å R-free 0.222
6RSK Cytochrome c co-crystallized with 20 eq. sulfonato-calix[8]arene and 15 eq. spermine - structure II Deposited 2019-05-21 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain B 3–109（107 aa）
Not recorded HEC HEME C × 1 EVB sulfonato-calix[8]arene × 3 SO4 SULFATE ION × 5 SPM SPERMINE × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；293 K；0.1 M HEPES pH 7.5, 0.15 M NaCl, 2.2 M Ammonium sulfate, 0.04 M sulfonato-calix[8]arene, 0.03 M spermine
Resolution 2.31 Å R-free 0.222
6RSL Cytochrome c co-crystallized with 10 eq. sulfonato-calix[8]arene and 25 eq. spermine (dry-coating method) - structure III Deposited 2019-05-21 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 3–109（107 aa）
Not recorded HEC HEME C × 1 EVB sulfonato-calix[8]arene × 3 SPM SPERMINE × 4 SO4 SULFATE ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；293 K；0.10 M HEPES pH 7.5, 0.15 M NaCl, 2.20 M Ammonium sulfate, 0.02 M sulfonato-calix[8]arene, 0.05 M spermine
Resolution 1.99 Å R-free 0.265
6RSL Cytochrome c co-crystallized with 10 eq. sulfonato-calix[8]arene and 25 eq. spermine (dry-coating method) - structure III Deposited 2019-05-21 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain B 3–109（107 aa）
Not recorded HEC HEME C × 1 EVB sulfonato-calix[8]arene × 3 SPM SPERMINE × 4 SO4 SULFATE ION × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；293 K；0.10 M HEPES pH 7.5, 0.15 M NaCl, 2.20 M Ammonium sulfate, 0.02 M sulfonato-calix[8]arene, 0.05 M spermine
Resolution 1.99 Å R-free 0.265
6S8Y Crystal structure of cytochrome c in complex with a sulfonated quinoline-derived foldamer Deposited 2019-07-10 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 3–109（107 aa）
Not recorded HEC HEME C × 1 ZN ZINC ION × 3 ACT ACETATE ION × 2 L0T 8-acetamido-2-[[2-[[2-[[2-[[2-[[2-[[2-[(2-carboxy-4-sulfonato-quinolin-8-yl)carbamoyl]-4-sulfonato-quinolin-8-yl]carbamoyl]-4-sulfonato-quinolin-8-yl]carbamoyl]-4-sulfonato-quinolin-8-yl]carbamoyl]-4-sulfonato-quinolin-8-yl]carbamoyl]-4-sulfonato-quinolin-8-yl]carbamoyl]-4-sulfonato-quinolin-8-yl]carbamoyl]quinoline-4-sulfonate × 2 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 4.5；293 K；5 % PEG 3350, 100 mM sodium acetate pH 4.5, 200 mM zinc acetate
Resolution 2.09 Å R-free 0.267
6SUY Yeast cytochrome c in complex with an octa-anionic calix[4]arene Deposited 2019-09-17 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain A 2–109（108 aa）
Chain B 2–109（108 aa）
Not recorded HEC HEME C × 2 LVT octa-anionic calix[4]arene × 2 NA SODIUM ION × 2 SO4 SULFATE ION × 5 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 5；293 K；3.15 M Ammonium sulfate + 0.1 M sodium citrate pH 5.0
Resolution 1.75 Å R-free 0.179
6Y0J Cytochrome c in complex with phosphonato-calix[6]arene and sulfonato-calix[8]arene Deposited 2020-02-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 3–109（107 aa）
Not recorded HEC HEME C × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION；293 K；10 % PEG 8000, 8 % ethylene glycol, 100 mM HEPES pH 7.5
Resolution 2.70 Å R-free 0.269
6Y0J Cytochrome c in complex with phosphonato-calix[6]arene and sulfonato-calix[8]arene Deposited 2020-02-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain B 3–109（107 aa）
Not recorded HEC HEME C × 1 7AZ phosphonato-calix[6]arene × 2 EVB sulfonato-calix[8]arene × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION；293 K；10 % PEG 8000, 8 % ethylene glycol, 100 mM HEPES pH 7.5
Resolution 2.70 Å R-free 0.269
6Y0J Cytochrome c in complex with phosphonato-calix[6]arene and sulfonato-calix[8]arene Deposited 2020-02-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 3 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain C 3–109（107 aa）
Not recorded HEC HEME C × 1 7AZ phosphonato-calix[6]arene × 1 EVB sulfonato-calix[8]arene × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION；293 K；10 % PEG 8000, 8 % ethylene glycol, 100 mM HEPES pH 7.5
Resolution 2.70 Å R-free 0.269
6Y0J Cytochrome c in complex with phosphonato-calix[6]arene and sulfonato-calix[8]arene Deposited 2020-02-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 4 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain D 3–109（107 aa）
Not recorded HEC HEME C × 1 7AZ phosphonato-calix[6]arene × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION；293 K；10 % PEG 8000, 8 % ethylene glycol, 100 mM HEPES pH 7.5
Resolution 2.70 Å R-free 0.269
7BBT Structure of cytochrome c in complex with a p-benzyl-sulfonato-calix[8]arene-PEG pseudorotaxane Deposited 2020-12-18 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein homooligomer Homooligomer；Protein × 4 PDB declaration: tetrameric
Chain A 3–109（107 aa）
Chain B 3–109（107 aa）
Chain C 3–109（107 aa）
Chain D 3–109（107 aa）
Not recorded HEC HEME C × 4 T8W 4-[[49,50,51,52,53,54,55,56-octahydroxy-11,17,23,29,35,41,47-heptakis[(4-sulfonatophenyl)methyl]-5-nonacyclo[43.3.1.13,7.19,13.115,19.121,25.127,31.133,37.139,43]hexapentaconta-1(49),3,5,7(56),9,11,13(55),15,17,19(54),21,23,25(53),27,29,31(52),33,35,37(51),39,41,43(50),45,47-tetracosaenyl]methyl]benzenesulfonate × 3 15P POLYETHYLENE GLYCOL (N=34) × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；293 K；20 % PEG 3350 200mM Ammonium formate
Resolution 3.02 Å R-free 0.261
7MRI Crystal structure of N63T yeast iso-1-cytochrome c Deposited 2021-05-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 3–109（107 aa）
Not recorded HEC HEME C × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 8.5；293 K；0.1 M Tris, pH 8.5, 30% w/v PEG1000
Resolution 2.46 Å R-free 0.208
7MRI Crystal structure of N63T yeast iso-1-cytochrome c Deposited 2021-05-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 2 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain C 3–109（107 aa）
Not recorded HEC HEME C × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 8.5；293 K；0.1 M Tris, pH 8.5, 30% w/v PEG1000
Resolution 2.46 Å R-free 0.208
7MRI Crystal structure of N63T yeast iso-1-cytochrome c Deposited 2021-05-07 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 3 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain E 3–109（107 aa）
Not recorded HEC HEME C × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 8.5；293 K；0.1 M Tris, pH 8.5, 30% w/v PEG1000
Resolution 2.46 Å R-free 0.208
7PR2 Cocrystal of cytochrome c and sulfonato-thiacalix[4]arene Deposited 2021-09-20 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein homooligomer Homooligomer；Protein × 2 PDB declaration: dimeric
Chain A 3–109（107 aa）
Chain B 3–109（107 aa）
Not recorded HEC HEME C × 2 80M sulfonato-thiacalix[4]arene × 3 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 5.6；293 K；25% PEG 3350, 100 mM tri-Sodium citrate pH 5.6, 100 mM Magnesium chloride
Resolution 1.73 Å R-free 0.251
7PR3 Cocrystal Form I of a cytochrome c, sulfonato-thiacalix[4]arene - zinc cluster Deposited 2021-09-20 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein homooligomer Homooligomer；Protein × 4 PDB declaration: tetrameric
Chain A 3–109（107 aa）
Chain B 3–109（107 aa）
Chain C 3–109（107 aa）
Chain D 3–109（107 aa）
Not recorded HEC HEME C × 4 ZN ZINC ION × 33 80M sulfonato-thiacalix[4]arene × 6 PO4 PHOSPHATE ION × 6 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 5.6；293 K；20% PEG 3350, 100 mM sodium acetate pH 5.6, 30 mM zinc acetate
Resolution 2.37 Å R-free 0.253
7PR4 Cocrystal Form II of a cytochrome c, sulfonato-thiacalix[4]arene - zinc cluster Deposited 2021-09-20 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein monomer Monomer；Protein × 1 PDB declaration: monomeric
Chain A 3–109（107 aa）
Not recorded HEC HEME C × 1 80M sulfonato-thiacalix[4]arene × 1 ZN ZINC ION × 6 PO4 PHOSPHATE ION × 3 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, HANGING DROP；pH 5.6；293 K；20% PEG 3350, 100 mM sodium acetate pH 5.6, 10 mM zinc acetate
Resolution 1.32 Å R-free 0.225
9Q39 Structure of a sortase-linked cytochrome c peroxidase - cytochrome c fusion protein Deposited 2025-08-18 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Insufficient information Monomer；Protein × 1 PDB declaration: monomeric
Chain A 7–109（103 aa）
Not recorded PO4 PHOSPHATE ION × 1 HEC HEME C × 1 HEM PROTOPORPHYRIN IX CONTAINING FE × 1 X-RAY DIFFRACTION
X-ray crystallization conditions VAPOR DIFFUSION, SITTING DROP；pH 4.5；295 K；Upon purification, CcP-GGSG(2x)LPATGGG was buffer exchanged into filtered nanopure water and concentrated to 0.5 mM. Initial crystal hits were obtained using a Gryphon robot (Arts Robbins Instrument). Larger crystals were optimized via vapor diffusion in 4 microliter sitting drops, which were mixed 1:1 with well solution (14-20 % PEG 8000, 40 mM KH2PO4, 20 % glycerol, pH 3.0-5.5). Crystals growing under these conditions formed within a week.
Resolution 3.24 Å R-free 0.331

91 other PDB entries and 124 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name CYC1_YEAST
Isoform —
PDB entities 2
Chains and sequence ranges Author chain B； PDBConstruct 1–108； UniProt 2–108 Author chain D； PDBConstruct 1–108； UniProt 2–108

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 1s6v

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 1s6v
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2. Structure Basics 2. Structure Basics

Entry ID entry_id1s6v
Deposition date deposition_date2004-01-27
Structure title titleStructure of a cytochrome c peroxidase-cytochrome c site specific cross-link
Keywords keywordsOXIDOREDUCTASE, heme enzyme, electron transfer, OXIDOREDUCTASE-ELECTRON TRANSPORT COMPLEX; OXIDOREDUCTASE/ELECTRON TRANSPORT
Experimental Method methodX-RAY DIFFRACTION
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3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier30.71 Å
Radius of gyration Rg (electron density) rg_electron29.81 Å
Forward intensity I(0) i0139309000.00
Molecular weight molecular_weight93703.0 kDa
Excluded volume excluded_volume116930 ų
Envelope volume envelope_volume140650 ų
Hydration-shell volume shell_volume39217 ų
Envelope diameter envelope_diameter100.9 Å
Shell Rg shell_rg37.09 Å
Envelope Rg envelope_rg29.80 Å
Shape Rg shape_rg29.81 Å
Total Rg total_rg30.44 Å
Total atoms total_atoms6611
Residues n_residues804
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 Å−1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3
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4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax99.1 Å
Rg (real space) rg_real30.66 Å
Rg uncertainty (real space) rg_real_error0.50 Å
I(0) (real space) i0_real1.3930e+08
I(0) uncertainty (real space) i0_real_error1.7390e+06
Rg (reciprocal space) rg_reciprocal30.69 Å
I(0) (reciprocal space) i0_reciprocal139300000.0000
Solution quality estimate total_estimate0.8999
Solution quality rating solution_quality GOOD a GOOD solution
P(r) peaks n_peaks1
Primary peak position r_peak_primary36.2 Å
Skewness Skewness skewness0.281
Kurtosis Kurtosis kurtosis-0.459
Angular range angular_range— – 0.2600 Å−1
Current regularization parameter α current_alpha0.0001
Highest regularization parameter α highest_alpha32620000.0000
Real-space data points n_real_points53
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.000; Oscil: 0.919; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.996; Smooth: 0.943
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5. Crystallography and Experiment 5. Crystallography & Experiment

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6. Entities and Polymers Entities & Polymers (5)

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7. Fold Classification (SCOP + CATH) 10 domains

SCOP 2.08 (4 domains)

Domain ID domain_idd1s6va_
Class classa — All alpha proteins
Fold Fold folda.93 — Heme-dependent peroxidases
Superfamily Superfamily superfamilya.93.1 — Heme-dependent peroxidases
Family Family familya.93.1.1 — CCP-like
Domain ID domain_idd1s6vb_
Class classa — All alpha proteins
Fold Fold folda.3 — Cytochrome c
Superfamily Superfamily superfamilya.3.1 — Cytochrome c
Family Family familya.3.1.1 — monodomain cytochrome c
Domain ID domain_idd1s6vc_
Class classa — All alpha proteins
Fold Fold folda.93 — Heme-dependent peroxidases
Superfamily Superfamily superfamilya.93.1 — Heme-dependent peroxidases
Family Family familya.93.1.1 — CCP-like
Domain ID domain_idd1s6vd_
Class classa — All alpha proteins
Fold Fold folda.3 — Cytochrome c
Superfamily Superfamily superfamilya.3.1 — Cytochrome c
Family Family familya.3.1.1 — monodomain cytochrome c

CATH v4.4 (6 domains)

Domain ID domain_id1s6vA01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology520 — Peroxidase; domain 1
Homologous superfamily homologous superfamily10 —
Domain ID domain_id1s6vA02
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology420 — Peroxidase; domain 2
Homologous superfamily homologous superfamily10 — Peroxidase, domain 2
Domain ID domain_id1s6vB00
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology760 — Cytochrome Bc1 Complex; Chain D, domain 2
Homologous superfamily homologous superfamily10 — Cytochrome c-like domain
Domain ID domain_id1s6vC01
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology520 — Peroxidase; domain 1
Homologous superfamily homologous superfamily10 —
Domain ID domain_id1s6vC02
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology420 — Peroxidase; domain 2
Homologous superfamily homologous superfamily10 — Peroxidase, domain 2
Domain ID domain_id1s6vD00
Class class1 — Mainly Alpha
Architecture architecture10 — Orthogonal Bundle
Topology topology760 — Cytochrome Bc1 Complex; Chain D, domain 2
Homologous superfamily homologous superfamily10 — Cytochrome c-like domain
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8. Citations (2)

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9. Files and Curves (10)