Human immunodeficiency virus 1
| Assembly | Physical composition | Protein state | Molecular copy count | Associated components | Data consistency |
|---|---|---|---|---|---|
| 1 | Protein monomer | Monomer | Protein 1 | No other associated polymer | Consistent with protein count |
| UniProt name | POL_HV1N5 |
| Isoform | — |
| PDB entities | 1 |
| Chains and sequence ranges | Author chain A； PDBConstruct 22–105； UniProt 280–363 |
The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.
| Entry ID entry_id | 2jyl |
| Deposition date deposition_date | 2007-12-14 |
| Structure title title | Solution Structure of A Double Mutant of The Carboxy-terminal Dimerization Domain of The HIV-1 Capsid Protein |
| Keywords keywords | ;HIV-1, Carboxy-terminal, Dimerization domain, CTD, 3D-NMR, Capsid Protein (CA), double mutant, monomer structure, AIDS, Aspartyl protease, Capsid maturation, Core protein, Cytoplasm, DNA integration, DNA recombination, DNA-directed DNA polymerase, Endonuclease, Hydrolase, Lipoprotein, Magnesium, Membrane, Metal-binding, Multifunctional enzyme, Myristate, Nuclease, Nucleotidyltransferase, Nucleus, Phosphoprotein, Protease, RNA-binding, RNA-directed DNA polymerase, Transferase, Viral nucleoprotein, Virion, Zinc, Zinc-finger, VIRAL PROTEIN ;; VIRAL PROTEIN |
| Experimental Method method | SOLUTION NMR |
This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.
Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)
| Rg（Guinier） | 15.07 Å |
| Rg (electron density) | 14.11 Å |
| Total Rg | 15.31 Å |
| Atom count | 1301 |
| Residues | 84 |
| Excluded volume | 11390 ų |
| Maximum q | 0.500 Å⁻¹ |
| Domain ID domain_id | d2jyla_ |
| Class class | a — All alpha proteins |
| Fold Fold fold | a.28 — Acyl carrier protein-like |
| Superfamily Superfamily superfamily | a.28.3 — Retrovirus capsid dimerization domain-like |
| Family Family family | a.28.3.1 — Retrovirus capsid protein C-terminal domain |
| Domain ID domain_id | 2jylA00 |
| Class class | 1 — Mainly Alpha |
| Architecture architecture | 10 — Orthogonal Bundle |
| Topology topology | 1200 — Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A |
| Homologous superfamily homologous superfamily | 30 — Retrovirus capsid C-terminal domain |