6ci1

The Structure of Full-Length Kv Beta 2.1 Determined by Cryogenic Electron Microscopy

Method: ELECTRON MICROSCOPY Dmax: 121.6 Å Quality: GOOD

1. Protein Identity and Related Structures Protein Identity & Related Structures

Voltage-gated potassium channel subunit beta-2

Rattus norvegicus

UniProt P62483

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein homooligomer Homooligomer Protein × 8 PDB declaration: octameric(8) Consistent with protein copy count Chain A; UniProt 36–361 Chain B; UniProt 36–361 Chain C; UniProt 36–361 Chain D; UniProt 36–361 Chain E; UniProt 36–361 Chain F; UniProt 36–361 Chain G; UniProt 36–361 Chain H; UniProt 36–361 Not recorded No other associated polymer ELECTRON MICROSCOPY cryo-EM buffer:pH 8 cryo-EM vitrification conditions:Cryogen ETHANE Resolution 4.90 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

17 other PDB entries and 29 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name KCAB2_RAT
Isoform
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–326; UniProt 36–361 Author chain B; PDBConstruct 1–326; UniProt 36–361 Author chain C; PDBConstruct 1–326; UniProt 36–361 Author chain D; PDBConstruct 1–326; UniProt 36–361 Author chain E; PDBConstruct 1–326; UniProt 36–361 Author chain F; PDBConstruct 1–326; UniProt 36–361 Author chain G; PDBConstruct 1–326; UniProt 36–361 Author chain H; PDBConstruct 1–326; UniProt 36–361

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 6ci1

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 6ci1
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2. Structure Basics 2. Structure Basics

Entry ID entry_id6ci1
Deposition date deposition_date2018-02-23
Structure title titleThe Structure of Full-Length Kv Beta 2.1 Determined by Cryogenic Electron Microscopy
Keywords keywordsKv Channel, Regulator, Complex, OXIDOREDUCTASE; OXIDOREDUCTASE
Experimental Method methodELECTRON MICROSCOPY

3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier41.95
Radius of gyration Rg (electron density) rg_electron41.40
Forward intensity I(0) i01195560000.00
Molecular weight molecular_weight291200.0 kDa
Excluded volume excluded_volume358630 ų
Envelope volume envelope_volume330920 ų
Hydration-shell volume shell_volume66777 ų
Envelope diameter envelope_diameter125.5
Shell Rg shell_rg47.47
Envelope Rg envelope_rg39.13
Shape Rg shape_rg41.54
Total Rg total_rg41.61
Total atoms total_atoms
Residues n_residues
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 −1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3

4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax121.6
Rg (real space) rg_real41.67
Rg uncertainty (real space) rg_real_error0.37
I(0) (real space) i0_real1.1960e+09
I(0) uncertainty (real space) i0_real_error1.7070e+07
Rg (reciprocal space) rg_reciprocal41.94
I(0) (reciprocal space) i0_reciprocal1196000000.0000
Solution quality estimate total_estimate0.8588
Solution quality rating solution_quality GOOD a GOOD solution
P(r) peaks n_peaks1
Primary peak position r_peak_primary54.4
Skewness Skewness skewness0.082
Kurtosis Kurtosis kurtosis-0.436
Angular range angular_range— – 0.1900 −1
Current regularization parameter α current_alpha0.0013
Highest regularization parameter α highest_alpha288100000.0000
Real-space data points n_real_points39
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.000; Oscil: 0.941; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.970; Smooth: 0.367

5. Crystallography and Experiment 5. Crystallography & Experiment

6. Entities and Polymers Entities & Polymers (1)

8. Citations (1)

9. Files and Curves (10)