6g2i

Filament of acetyl-CoA carboxylase and BRCT domains of BRCA1 (ACC-BRCT) at 5.9 A resolution

Method: ELECTRON MICROSCOPY Dmax: 372.7 Å Quality: GOOD

1. Protein Identity and Related Structures Protein Identity & Related Structures

Acetyl-CoA carboxylase 1

Homo sapiens

UniProt Q13085

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 18 PDB declaration: octadecameric(18) Consistent with protein copy count Chain A; UniProt 1–2346 Chain B; UniProt 1–2346 Chain C; UniProt 1–2346 Chain D; UniProt 1–2346 Chain E; UniProt 1–2346 Chain F; UniProt 1–2346 Chain G; UniProt 1–2346 Chain J; UniProt 1–2346 Chain Q; UniProt 1–2346 Chain R; UniProt 1–2346 Non-standard monomer:Yes (specific site not provided by mmCIF) Breast cancer type 1 susceptibility protein × 8 (P38398) ELECTRON MICROSCOPY cryo-EM buffer:pH 8 cryo-EM vitrification conditions:Cryogen ETHANE Resolution 5.90 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

9 other PDB entries and 19 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name ACACA_HUMAN
Isoform
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1–2346; UniProt 1–2346 Author chain B; PDBConstruct 1–2346; UniProt 1–2346 Author chain C; PDBConstruct 1–2346; UniProt 1–2346 Author chain D; PDBConstruct 1–2346; UniProt 1–2346 Author chain E; PDBConstruct 1–2346; UniProt 1–2346 Author chain F; PDBConstruct 1–2346; UniProt 1–2346 Author chain G; PDBConstruct 1–2346; UniProt 1–2346 Author chain J; PDBConstruct 1–2346; UniProt 1–2346 Author chain Q; PDBConstruct 1–2346; UniProt 1–2346 Author chain R; PDBConstruct 1–2346; UniProt 1–2346

Breast cancer type 1 susceptibility protein

Homo sapiens

UniProt P38398

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein heterocomplex Heteromer Protein × 18 PDB declaration: octadecameric(18) Consistent with protein copy count Chain H; UniProt 1667–1880 Chain K; UniProt 1667–1880 Chain M; UniProt 1667–1880 Chain O; UniProt 1667–1880 Chain S; UniProt 1667–1880 Chain U; UniProt 1667–1880 Chain W; UniProt 1667–1880 Chain Y; UniProt 1667–1880 Not recorded Acetyl-CoA carboxylase 1 × 10 (Q13085) ELECTRON MICROSCOPY cryo-EM buffer:pH 8 cryo-EM vitrification conditions:Cryogen ETHANE Resolution 5.90 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

31 other PDB entries and 70 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name BRCA1_HUMAN
Isoform P38398-7
PDB entities 2
Chains and sequence ranges Author chain H; PDBConstruct 27–240; UniProt 1667–1880 Author chain K; PDBConstruct 27–240; UniProt 1667–1880 Author chain M; PDBConstruct 27–240; UniProt 1667–1880 Author chain O; PDBConstruct 27–240; UniProt 1667–1880 Author chain S; PDBConstruct 27–240; UniProt 1667–1880 Author chain U; PDBConstruct 27–240; UniProt 1667–1880 Author chain W; PDBConstruct 27–240; UniProt 1667–1880 Author chain Y; PDBConstruct 27–240; UniProt 1667–1880

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 6g2i

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 6g2i
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2. Structure Basics 2. Structure Basics

Entry ID entry_id6g2i
Deposition date deposition_date2018-03-23
Structure title titleFilament of acetyl-CoA carboxylase and BRCT domains of BRCA1 (ACC-BRCT) at 5.9 A resolution
Keywords keywordsFilament, Helical, Multienzyme, Ligase, Biotin-dependent carboxylase; LIGASE
Experimental Method methodELECTRON MICROSCOPY

3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier
Radius of gyration Rg (electron density) rg_electron124.70
Forward intensity I(0) i057319500000.00
Molecular weight molecular_weight2068000.0 kDa
Excluded volume excluded_volume2594700 ų
Envelope volume envelope_volume5361200 ų
Hydration-shell volume shell_volume370100 ų
Envelope diameter envelope_diameter415.4
Shell Rg shell_rg113.00
Envelope Rg envelope_rg118.20
Shape Rg shape_rg124.70
Total Rg total_rg124.60
Total atoms total_atoms288810
Residues n_residues18344
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 −1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3

4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax372.7
Rg (real space) rg_real126.80
Rg uncertainty (real space) rg_real_error1.58
I(0) (real space) i0_real5.6990e+10
I(0) uncertainty (real space) i0_real_error1.1900e+09
Rg (reciprocal space) rg_reciprocal113.40
I(0) (reciprocal space) i0_reciprocal55120000000.0000
Solution quality estimate total_estimate0.8851
Solution quality rating solution_quality GOOD a GOOD solution
P(r) peaks n_peaks1
Primary peak position r_peak_primary124.2
Skewness Skewness skewness0.480
Kurtosis Kurtosis kurtosis-0.534
Angular range angular_range— – 0.0600 −1
Current regularization parameter α current_alpha1.4940
Highest regularization parameter α highest_alpha4853000000.0000
Real-space data points n_real_points13
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.000; Oscil: 0.895; Stabil: 0.944; Sysdev: 1.000; Positv: 1.000; Valcen: 0.979; Smooth: 0.011

5. Crystallography and Experiment 5. Crystallography & Experiment

6. Entities and Polymers Entities & Polymers (2)

8. Citations (1)

9. Files and Curves (10)