6zqa

Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state A (Poly-Ala)

Method: ELECTRON MICROSCOPY
▼

1. Protein Identity and Related Structures Protein Identity & Related Structures

Periodic tryptophan protein 2

OrganismNot specified

UniProt P25635

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PWP2_YEAST
Isoform —
PDB entities 1
Chains and sequence ranges Author chain UA; PDBConstruct 1–923; UniProt 1–923

Nucleolar complex protein 14

OrganismNot specified

UniProt Q99207

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NOP14_YEAST
Isoform —
PDB entities 2
Chains and sequence ranges Author chain UB; PDBConstruct 1–810; UniProt 1–810

Something about silencing protein 10

OrganismNot specified

UniProt Q12136

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SAS10_YEAST
Isoform —
PDB entities 3
Chains and sequence ranges Author chain UC; PDBConstruct 1–610; UniProt 1–610

U3 small nucleolar RNA-associated protein 4

OrganismNot specified

UniProt Q06679

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name UTP4_YEAST
Isoform —
PDB entities 4
Chains and sequence ranges Author chain UD; PDBConstruct 1–776; UniProt 1–776

U3 small nucleolar RNA-associated protein 5

OrganismNot specified

UniProt Q04177

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name UTP5_YEAST
Isoform —
PDB entities 5
Chains and sequence ranges Author chain UE; PDBConstruct 1–643; UniProt 1–643

U3 small nucleolar RNA-associated protein 6

OrganismNot specified

UniProt Q02354

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name UTP6_YEAST
Isoform —
PDB entities 6
Chains and sequence ranges Author chain UF; PDBConstruct 1–440; UniProt 1–440

U3 small nucleolar RNA-associated protein 7

OrganismNot specified

UniProt P40055

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name UTP7_YEAST
Isoform —
PDB entities 7
Chains and sequence ranges Author chain UG; PDBConstruct 1–554; UniProt 1–554

U3 small nucleolar RNA-associated protein 8

OrganismNot specified

UniProt P53276

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name UTP8_YEAST
Isoform —
PDB entities 8
Chains and sequence ranges Author chain UH; PDBConstruct 1–713; UniProt 1–713

U3 small nucleolar RNA-associated protein 9

OrganismNot specified

UniProt P38882

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name UTP9_YEAST
Isoform —
PDB entities 9
Chains and sequence ranges Author chain UI; PDBConstruct 1–575; UniProt 1–575

U3 small nucleolar RNA-associated protein 10

OrganismNot specified

UniProt P42945

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name UTP10_YEAST
Isoform —
PDB entities 10
Chains and sequence ranges Author chain UJ; PDBConstruct 1–1769; UniProt 1–1769

U3 small nucleolar RNA-associated protein 11

OrganismNot specified

UniProt P34247

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name UTP11_YEAST
Isoform —
PDB entities 11
Chains and sequence ranges Author chain UK; PDBConstruct 1–250; UniProt 1–250

U3 small nucleolar RNA-associated protein 12

OrganismNot specified

UniProt Q12220

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name UTP12_YEAST
Isoform —
PDB entities 12
Chains and sequence ranges Author chain UL; PDBConstruct 1–943; UniProt 1–943

U3 small nucleolar RNA-associated protein 13

OrganismNot specified

UniProt Q05946

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name UTP13_YEAST
Isoform —
PDB entities 13
Chains and sequence ranges Author chain UM; PDBConstruct 1–817; UniProt 1–817

U3 small nucleolar RNA-associated protein 14

OrganismNot specified

UniProt Q04500

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name UTP14_YEAST
Isoform —
PDB entities 14
Chains and sequence ranges Author chain UN; PDBConstruct 1–899; UniProt 1–899

U3 small nucleolar RNA-associated protein 15

OrganismNot specified

UniProt Q04305

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name UTP15_YEAST
Isoform —
PDB entities 15
Chains and sequence ranges Author chain UO; PDBConstruct 1–513; UniProt 1–513

Bud site selection protein 21

OrganismNot specified

UniProt Q08492

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name BUD21_YEAST
Isoform —
PDB entities 16
Chains and sequence ranges Author chain UP; PDBConstruct 1–214; UniProt 1–214

NET1-associated nuclear protein 1

OrganismNot specified

UniProt Q02931

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name UTP17_YEAST
Isoform —
PDB entities 17
Chains and sequence ranges Author chain UQ; PDBConstruct 1–896; UniProt 1–896

U3 small nucleolar RNA-associated protein 18

OrganismNot specified

UniProt P40362

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name UTP18_YEAST
Isoform —
PDB entities 18
Chains and sequence ranges Author chain UR; PDBConstruct 1–594; UniProt 1–594

Nucleolar complex protein 4

OrganismNot specified

UniProt Q06512

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NOC4_YEAST
Isoform —
PDB entities 19
Chains and sequence ranges Author chain US; PDBConstruct 1–552; UniProt 1–552

U3 small nucleolar RNA-associated protein 21

OrganismNot specified

UniProt Q06078

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name UTP21_YEAST
Isoform —
PDB entities 20
Chains and sequence ranges Author chain UU; PDBConstruct 1–939; UniProt 1–939

U3 small nucleolar RNA-associated protein 22

OrganismNot specified

UniProt P53254

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name UTP22_YEAST
Isoform —
PDB entities 21
Chains and sequence ranges Author chain UV; PDBConstruct 1–1237; UniProt 1–1237

rRNA-processing protein FCF1

OrganismNot specified

UniProt Q05498

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name FCF1_YEAST
Isoform —
PDB entities 22
Chains and sequence ranges Author chain UX; PDBConstruct 1–189; UniProt 1–189

Ribosome biogenesis protein UTP30

OrganismNot specified

UniProt P36144

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RL1D1_YEAST
Isoform —
PDB entities 23
Chains and sequence ranges Author chain UZ; PDBConstruct 1–274; UniProt 1–274

;rRNA 2'-O-methyltransferase fibrillarin ;

OrganismNot specified

UniProt P15646

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name FBRL_YEAST
Isoform —
PDB entities 24
Chains and sequence ranges Author chain CA; PDBConstruct 1–327; UniProt 1–327 Author chain CB; PDBConstruct 1–327; UniProt 1–327

Nucleolar protein 56

OrganismNot specified

UniProt Q12460

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NOP56_YEAST
Isoform —
PDB entities 25
Chains and sequence ranges Author chain CD; PDBConstruct 1–504; UniProt 1–504

Nucleolar protein 58

OrganismNot specified

UniProt Q12499

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NOP58_YEAST
Isoform —
PDB entities 26
Chains and sequence ranges Author chain CE; PDBConstruct 1–511; UniProt 1–511

13 kDa ribonucleoprotein-associated protein

OrganismNot specified

UniProt P39990

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SNU13_YEAST
Isoform —
PDB entities 27
Chains and sequence ranges Author chain CF; PDBConstruct 1–126; UniProt 1–126 Author chain CG; PDBConstruct 1–126; UniProt 1–126

Ribosomal RNA-processing protein 9

OrganismNot specified

UniProt Q06506

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RRP9_YEAST
Isoform —
PDB entities 28
Chains and sequence ranges Author chain CH; PDBConstruct 1–573; UniProt 1–573

U3 small nucleolar ribonucleoprotein protein IMP3

OrganismNot specified

UniProt P32899

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name IMP3_YEAST
Isoform —
PDB entities 29
Chains and sequence ranges Author chain CI; PDBConstruct 1–183; UniProt 1–183

U3 small nucleolar ribonucleoprotein protein IMP4

OrganismNot specified

UniProt P53941

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name IMP4_YEAST
Isoform —
PDB entities 30
Chains and sequence ranges Author chain CJ; PDBConstruct 1–290; UniProt 1–290

U3 small nucleolar RNA-associated protein MPP10

OrganismNot specified

UniProt P47083

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name MPP10_YEAST
Isoform —
PDB entities 31
Chains and sequence ranges Author chain CK; PDBConstruct 1–593; UniProt 1–593

Ribosome biogenesis protein BMS1

OrganismNot specified

UniProt Q08965

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name BMS1_YEAST
Isoform —
PDB entities 32
Chains and sequence ranges Author chain CL; PDBConstruct 1–1183; UniProt 1–1183

;RNA 3'-terminal phosphate cyclase-like protein ;

OrganismNot specified

UniProt Q08096

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RCL1_YEAST
Isoform —
PDB entities 33
Chains and sequence ranges Author chain CM; PDBConstruct 1–367; UniProt 1–367

Ribosomal RNA-processing protein 7

OrganismNot specified

UniProt P25368

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RRP7_YEAST
Isoform —
PDB entities 34
Chains and sequence ranges Author chain CN; PDBConstruct 1–297; UniProt 1–297

Ribosomal RNA small subunit methyltransferase NEP1

OrganismNot specified

UniProt Q06287

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name NEP1_YEAST
Isoform —
PDB entities 35
Chains and sequence ranges Author chain JF; PDBConstruct 1–252; UniProt 1–252 Author chain JG; PDBConstruct 1–252; UniProt 1–252

Essential nuclear protein 1

OrganismNot specified

UniProt P38333

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name ENP1_YEAST
Isoform —
PDB entities 36
Chains and sequence ranges Author chain JH; PDBConstruct 1–483; UniProt 1–483

Pre-rRNA-processing protein PNO1

OrganismNot specified

UniProt Q99216

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name PNO1_YEAST
Isoform —
PDB entities 37
Chains and sequence ranges Author chain JJ; PDBConstruct 1–274; UniProt 1–274

rRNA-processing protein FCF2

OrganismNot specified

UniProt Q12035

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name FCF2_YEAST
Isoform —
PDB entities 38
Chains and sequence ranges Author chain JM; PDBConstruct 1–217; UniProt 1–217

Protein FAF1

OrganismNot specified

UniProt P40546

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name FAF1_YEAST
Isoform —
PDB entities 39
Chains and sequence ranges Author chain JN; PDBConstruct 1–346; UniProt 1–346

KRR1 small subunit processome component

OrganismNot specified

UniProt P25586

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name KRR1_YEAST
Isoform —
PDB entities 40
Chains and sequence ranges Author chain JO; PDBConstruct 1–316; UniProt 1–316

Protein SOF1

OrganismNot specified

UniProt P33750

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name DCA13_YEAST
Isoform —
PDB entities 41
Chains and sequence ranges Author chain JP; PDBConstruct 1–489; UniProt 1–489

Regulator of rDNA transcription protein 14

OrganismNot specified

UniProt P40470

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RRT14_YEAST
Isoform —
PDB entities 42
Chains and sequence ranges Author chain JQ; PDBConstruct 1–206; UniProt 1–206

40S ribosomal protein S1-A

OrganismNot specified

UniProt P33442

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS3A1_YEAST
Isoform —
PDB entities 43
Chains and sequence ranges Author chain DA; PDBConstruct 1–255; UniProt 1–255

Rps5p

OrganismNot specified

UniProt P26783

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS5_YEAST
Isoform —
PDB entities 44
Chains and sequence ranges Author chain DF; PDBConstruct 1–225; UniProt 1–225

40S ribosomal protein S7-A

OrganismNot specified

UniProt P26786

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS7A_YEAST
Isoform —
PDB entities 45
Chains and sequence ranges Author chain DH; PDBConstruct 1–190; UniProt 1–190

40S ribosomal protein S9-A

OrganismNot specified

UniProt O13516

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS9A_YEAST
Isoform —
PDB entities 46
Chains and sequence ranges Author chain DJ; PDBConstruct 1–197; UniProt 1–197

40S ribosomal protein S13

OrganismNot specified

UniProt P05756

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS13_YEAST
Isoform —
PDB entities 47
Chains and sequence ranges Author chain DN; PDBConstruct 1–151; UniProt 1–151

40S ribosomal protein S14-A

OrganismNot specified

UniProt P06367

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS14A_YEAST
Isoform —
PDB entities 48
Chains and sequence ranges Author chain DO; PDBConstruct 1–137; UniProt 1–137

40S ribosomal protein S16-A

OrganismNot specified

UniProt P0CX51

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS16A_YEAST
Isoform —
PDB entities 49
Chains and sequence ranges Author chain DQ; PDBConstruct 1–143; UniProt 1–143

40S ribosomal protein S18-A

OrganismNot specified

UniProt P0CX55

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS18A_YEAST
Isoform —
PDB entities 50
Chains and sequence ranges Author chain DS; PDBConstruct 1–146; UniProt 1–146

40S ribosomal protein S22-A

OrganismNot specified

UniProt P0C0W1

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS22A_YEAST
Isoform —
PDB entities 51
Chains and sequence ranges Author chain DW; PDBConstruct 1–130; UniProt 1–130

40S ribosomal protein S23-A

OrganismNot specified

UniProt P0CX29

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S27-A × 1 (P35997) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS23A_YEAST
Isoform —
PDB entities 52
Chains and sequence ranges Author chain DX; PDBConstruct 1–145; UniProt 1–145

40S ribosomal protein S27-A

OrganismNot specified

UniProt P35997

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S28-A × 1 (Q3E7X9) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS27A_YEAST
Isoform —
PDB entities 53
Chains and sequence ranges Author chain Db; PDBConstruct 1–82; UniProt 1–82

40S ribosomal protein S28-A

OrganismNot specified

UniProt Q3E7X9

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Protein–RNA Heteromer Protein 57 RNA 3 Periodic tryptophan protein 2 × 1 (P25635) Nucleolar complex protein 14 × 1 (Q99207) Something about silencing protein 10 × 1 (Q12136) U3 small nucleolar RNA-associated protein 4 × 1 (Q06679) U3 small nucleolar RNA-associated protein 5 × 1 (Q04177) U3 small nucleolar RNA-associated protein 6 × 1 (Q02354) U3 small nucleolar RNA-associated protein 7 × 1 (P40055) U3 small nucleolar RNA-associated protein 8 × 1 (P53276) U3 small nucleolar RNA-associated protein 9 × 1 (P38882) U3 small nucleolar RNA-associated protein 10 × 1 (P42945) U3 small nucleolar RNA-associated protein 11 × 1 (P34247) U3 small nucleolar RNA-associated protein 12 × 1 (Q12220) U3 small nucleolar RNA-associated protein 13 × 1 (Q05946) U3 small nucleolar RNA-associated protein 14 × 1 (Q04500) U3 small nucleolar RNA-associated protein 15 × 1 (Q04305) Bud site selection protein 21 × 1 (Q08492) NET1-associated nuclear protein 1 × 1 (Q02931) U3 small nucleolar RNA-associated protein 18 × 1 (P40362) Nucleolar complex protein 4 × 1 (Q06512) U3 small nucleolar RNA-associated protein 21 × 1 (Q06078) U3 small nucleolar RNA-associated protein 22 × 1 (P53254) rRNA-processing protein FCF1 × 1 (Q05498) Ribosome biogenesis protein UTP30 × 1 (P36144) ;rRNA 2'-O-methyltransferase fibrillarin ; × 2 (P15646) Nucleolar protein 56 × 1 (Q12460) Nucleolar protein 58 × 1 (Q12499) 13 kDa ribonucleoprotein-associated protein × 2 (P39990) Ribosomal RNA-processing protein 9 × 1 (Q06506) U3 small nucleolar ribonucleoprotein protein IMP3 × 1 (P32899) U3 small nucleolar ribonucleoprotein protein IMP4 × 1 (P53941) U3 small nucleolar RNA-associated protein MPP10 × 1 (P47083) Ribosome biogenesis protein BMS1 × 1 (Q08965) ;RNA 3'-terminal phosphate cyclase-like protein ; × 1 (Q08096) Ribosomal RNA-processing protein 7 × 1 (P25368) Ribosomal RNA small subunit methyltransferase NEP1 × 2 (Q06287) Essential nuclear protein 1 × 1 (P38333) Pre-rRNA-processing protein PNO1 × 1 (Q99216) rRNA-processing protein FCF2 × 1 (Q12035) Protein FAF1 × 1 (P40546) KRR1 small subunit processome component × 1 (P25586) Protein SOF1 × 1 (P33750) Regulator of rDNA transcription protein 14 × 1 (P40470) 40S ribosomal protein S1-A × 1 (P33442) Rps5p × 1 (P26783) 40S ribosomal protein S7-A × 1 (P26786) 40S ribosomal protein S9-A × 1 (O13516) 40S ribosomal protein S13 × 1 (P05756) 40S ribosomal protein S14-A × 1 (P06367) 40S ribosomal protein S16-A × 1 (P0CX51) 40S ribosomal protein S18-A × 1 (P0CX55) 40S ribosomal protein S22-A × 1 (P0C0W1) 40S ribosomal protein S23-A × 1 (P0CX29) 40S ribosomal protein S27-A × 1 (P35997) 5ETS RNA × 1 18S rRNA × 1 U3 snoRNA × 1 ZINC ION × 2 MAGNESIUM ION × 2 GUANOSINE-5'-TRIPHOSPHATE × 1 Consistent with all polymers

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name RS28A_YEAST
Isoform —
PDB entities 54
Chains and sequence ranges Author chain Dc; PDBConstruct 1–67; UniProt 1–67

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

▼

2. Structure Basics 2. Structure Basics

Entry ID entry_id6zqa
Deposition date deposition_date2020-07-09
Structure title titleCryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state A (Poly-Ala)
Keywords keywordsribosome, 90S pre-ribosome, 40S pre-ribosome, A1 cleavage, Dhr1; RIBOSOME
Experimental Method methodELECTRON MICROSCOPY
▼

3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

6zqa__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

6zqa__assembly_1__model_1 | I(q)

10-2 10-1 107 108 109 1010 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

6zqa__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)0.00 Å
Rg (electron density)103.10 Å
Total Rg102.70 Å
Atom count125991
Residues20532
Excluded volume1966200 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 6zqa__assembly_1__model_1 60-meric (60) Success 4.1.3-1-20251215 (887e7ef) View Download
▶

4. Crystallography and Experiment 4. Crystallography & Experiment

▶

5. Entities and Polymers Entities & Polymers (60)

▶

7. Citations (1)