8fd6

Engineered human dynein motor domain in the microtubule-unbound state in the buffer containing ATP-Vi

Method: ELECTRON MICROSCOPY
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Cytoplasmic dynein 1 heavy chain 1,Serine--tRNA ligase

Homo sapiens

UniProt Q14204

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Monomer Protein 1 ADENOSINE-5'-TRIPHOSPHATE × 1 ADENOSINE-5'-DIPHOSPHATE × 3 VANADATE ION × 1 MAGNESIUM ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name DYHC1_HUMAN
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 3–1822; UniProt 1458–3277 Author chain A; PDBConstruct 1890–3124; UniProt 3412–4646

Cytoplasmic dynein 1 heavy chain 1,Serine--tRNA ligase

Homo sapiens

UniProt Q5SJX7

State in the Current Structure

Assembly Physical composition Protein state Molecular copy count Associated components Data consistency
1 Insufficient information Monomer Protein 1 ADENOSINE-5'-TRIPHOSPHATE × 1 ADENOSINE-5'-DIPHOSPHATE × 3 VANADATE ION × 1 MAGNESIUM ION × 1 Consistent with protein count

Other States of the Same Protein in the Database

View Construct and Data Evidence
UniProt name SYS_THET8
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A; PDBConstruct 1823–1889; UniProt 30–96

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

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2. Structure Basics 2. Structure Basics

Entry ID entry_id8fd6
Deposition date deposition_date2022-12-02
Structure title titleEngineered human dynein motor domain in the microtubule-unbound state in the buffer containing ATP-Vi
Keywords keywordsDynein, motor domain, microtubule-unbound, MOTOR PROTEIN; MOTOR PROTEIN
Experimental Method methodELECTRON MICROSCOPY
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3. Official assembly/model SAXS Official SAXS Profiles

This page reads only the latest assembly calculations. Every curve maps to an explicit PDB entry, official biological assembly and coordinate model.

8fd6__assembly_1__model_1

Assembly 1 · Model 1 · CRYSOL 4.1.3-1-20251215 (887e7ef)

Download this curve (.dat)

8fd6__assembly_1__model_1 | I(q)

10-2 10-1 106 107 108 109 q (1/Angstrom) I(q)
100 plotted points; both axes use logarithmic scales.

8fd6__assembly_1__model_1 | P(r) · Pending

The new assembly/model P(r) has not been calculated yet This placeholder does not display legacy data r (Angstrom) P(r)
P(r) will be calculated and displayed separately for the same assembly/model.
Rg(Guinier)46.90 Å
Rg (electron density)46.39 Å
Total Rg46.68 Å
Atom count22170
Residues2747
Excluded volume395730 ų
Maximum q0.500 Å⁻¹
Assembly Model Structure unit Oligomeric description Status CRYSOL Actions
1 1 8fd6__assembly_1__model_1 monomeric (1) Success 4.1.3-1-20251215 (887e7ef) View Download
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4. Crystallography and Experiment 4. Crystallography & Experiment

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5. Entities and Polymers Entities & Polymers (5)

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7. Citations (1)