← Back to search
9h4n

RPL13 (eL13)-mutant 80S ribosome from mouse

Method: ELECTRON MICROSCOPY Dmax: 238.4 Å Quality: EXCELLENT
▼

1. Protein Identity and Related Structures Protein Identity & Related Structures

Large ribosomal subunit protein uL30

OrganismNot specified

UniProt P14148

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain A1； UniProt 49–270 Not recorded Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain F 37–270（234 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LF 1–270（270 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LF 1–270（270 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain A1 1–270（270 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain A1 1–270（270 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LF 1–270（270 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LF 1–270（270 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LF 1–270（270 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LF 1–270（270 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain A1 1–270（270 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain A1 1–270（270 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain A1 1–270（270 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain A1 1–270（270 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain A1 1–270（270 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain A1 1–270（270 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL7_MOUSE
Isoform —
PDB entities 1
Chains and sequence ranges Author chain A1； PDBConstruct 1–222； UniProt 49–270

Large ribosomal subunit protein eL8

OrganismNot specified

UniProt P12970

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain B1； UniProt 28–259 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain G 29–262（234 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LG 1–266（266 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LG 1–266（266 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain B1 1–266（266 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain B1 1–266（266 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LG 1–266（266 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LG 1–266（266 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LG 1–266（266 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LG 1–266（266 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain B1 1–266（266 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain B1 1–266（266 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain B1 1–266（266 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain B1 1–266（266 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain B1 1–266（266 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain B1 1–266（266 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL7A_MOUSE
Isoform —
PDB entities 2
Chains and sequence ranges Author chain B1； PDBConstruct 1–232； UniProt 28–259

Large ribosomal subunit protein uL6

OrganismNot specified

UniProt P51410

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain C1； UniProt 1–190 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain H 1–191（191 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LH 1–192（192 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LH 1–192（192 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain C1 1–192（192 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain C1 1–192（192 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LH 1–190（190 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LH 1–192（192 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LH 1–192（192 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LH 1–192（192 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain C1 1–192（192 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain C1 1–192（192 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain C1 1–192（192 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain C1 1–192（192 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain C1 1–192（192 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain C1 1–192（192 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL9_MOUSE
Isoform —
PDB entities 3
Chains and sequence ranges Author chain C1； PDBConstruct 1–190； UniProt 1–190

Large ribosomal subunit protein uL16-like

OrganismNot specified

UniProt P86048

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain D1； UniProt 2–214 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LI 1–214（214 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain D1 1–214（214 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain D1 1–214（214 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LI 1–214（214 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LI 1–214（214 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LI 1–214（214 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LI 1–214（214 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å

7 other PDB entries and 7 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL10L_MOUSE
Isoform —
PDB entities 4
Chains and sequence ranges Author chain D1； PDBConstruct 1–213； UniProt 2–214

Large ribosomal subunit protein uL5

OrganismNot specified

UniProt Q9CXW4

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain E1； UniProt 3–176 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain J 9–177（169 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LJ 1–178（178 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LJ 1–178（178 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain E1 1–178（178 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain E1 1–178（178 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LJ 1–178（178 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LJ 1–178（178 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LJ 1–178（178 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LJ 1–178（178 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain E1 1–178（178 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain E1 1–178（178 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain E1 1–178（178 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain E1 1–178（178 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain E1 1–178（178 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain E1 1–178（178 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL11_MOUSE
Isoform —
PDB entities 5
Chains and sequence ranges Author chain E1； PDBConstruct 1–174； UniProt 3–176

Large ribosomal subunit protein eL13

OrganismNot specified

UniProt P47963

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain F1； UniProt 2–204 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain K 2–206（205 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LL 1–211（211 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LL 1–211（211 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain F1 1–211（211 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain F1 1–211（211 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LL 1–211（211 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LL 1–211（211 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LL 1–211（211 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LL 1–211（211 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain F1 2–204（203 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain F1 1–211（211 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain F1 1–211（211 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain F1 1–211（211 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain F1 1–211（211 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain F1 1–211（211 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL13_MOUSE
Isoform —
PDB entities 6
Chains and sequence ranges Author chain F1； PDBConstruct 1–203； UniProt 2–204

60S ribosomal protein L14

OrganismNot specified

UniProt Q9CR57

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain G1； UniProt 2–140 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain L 2–140（139 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LM 1–217（217 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LM 1–217（217 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain G1 1–217（217 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain G1 1–217（217 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LM 1–217（217 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LM 1–217（217 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LM 1–217（217 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LM 1–217（217 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain G1 1–217（217 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain G1 1–217（217 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain G1 1–217（217 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain G1 1–217（217 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain G1 1–217（217 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain G1 1–217（217 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL14_MOUSE
Isoform —
PDB entities 7
Chains and sequence ranges Author chain G1； PDBConstruct 1–139； UniProt 2–140

60S ribosomal protein L15

OrganismNot specified

UniProt Q9CZM2

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain H1； UniProt 2–204 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain M 2–204（203 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LN 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LN 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain H1 1–204（204 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain H1 1–204（204 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LN 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LN 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LN 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LN 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain H1 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain H1 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain H1 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain H1 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain H1 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain H1 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL15_MOUSE
Isoform —
PDB entities 8
Chains and sequence ranges Author chain H1； PDBConstruct 1–203； UniProt 2–204

Large ribosomal subunit protein uL2

OrganismNot specified

UniProt P62918

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain D2； UniProt 2–252 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain A 2–253（252 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LA 1–257（257 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LA 1–257（257 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain D2 1–257（257 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain D2 1–257（257 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LA 1–257（257 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LA 1–257（257 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LA 1–257（257 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LA 1–257（257 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain D2 1–257（257 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain D2 1–257（257 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain D2 1–257（257 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain D2 1–257（257 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain D2 1–257（257 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain D2 1–257（257 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL8_MOUSE
Isoform —
PDB entities 12
Chains and sequence ranges Author chain D2； PDBConstruct 1–251； UniProt 2–252

Large ribosomal subunit protein uL3

OrganismNot specified

UniProt P27659

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain E2； UniProt 2–403 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain B 2–395（394 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LB 1–403（403 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LB 1–403（403 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain E2 1–403（403 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain E2 1–403（403 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LB 1–403（403 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LB 1–403（403 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LB 1–403（403 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LB 1–403（403 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain E2 1–403（403 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain E2 1–403（403 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain E2 1–403（403 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain E2 1–403（403 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain E2 1–403（403 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain E2 1–403（403 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL3_MOUSE
Isoform —
PDB entities 13
Chains and sequence ranges Author chain E2； PDBConstruct 1–402； UniProt 2–403

Large ribosomal subunit protein uL4

OrganismNot specified

UniProt Q9D8E6

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain F2； UniProt 2–360 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain C 3–365（363 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LC 1–419（419 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LC 1–419（419 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain F2 1–419（419 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain F2 1–419（419 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LC 1–419（419 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LC 1–419（419 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LC 1–419（419 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LC 1–419（419 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain F2 1–419（419 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain F2 1–419（419 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain F2 1–419（419 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain F2 1–419（419 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain F2 1–419（419 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain F2 1–419（419 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL4_MOUSE
Isoform —
PDB entities 14
Chains and sequence ranges Author chain F2； PDBConstruct 1–359； UniProt 2–360

Large ribosomal subunit protein uL18

OrganismNot specified

UniProt P47962

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain G2； UniProt 2–294 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain D 4–297（294 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LD 1–297（297 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LD 1–297（297 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain G2 1–297（297 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain G2 1–297（297 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LD 1–297（297 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LD 1–297（297 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LD 1–297（297 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LD 1–297（297 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain G2 1–297（297 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain G2 1–297（297 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain G2 1–297（297 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain G2 1–297（297 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain G2 1–297（297 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain G2 1–297（297 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL5_MOUSE
Isoform —
PDB entities 15
Chains and sequence ranges Author chain G2； PDBConstruct 1–293； UniProt 2–294

Large ribosomal subunit protein uL13

OrganismNot specified

UniProt P19253

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain I2； UniProt 3–203 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain N 5–199（195 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LO 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LO 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain I2 1–203（203 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain I2 1–203（203 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LO 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LO 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LO 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LO 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain I2 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain I2 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain I2 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain I2 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain I2 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain I2 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL13A_MOUSE
Isoform —
PDB entities 17
Chains and sequence ranges Author chain I2； PDBConstruct 1–201； UniProt 3–203

60S ribosomal protein L17

OrganismNot specified

UniProt Q9CPR4

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain J2； UniProt 2–154 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain O 2–154（153 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain J2 1–184（184 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain J2 1–184（184 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LP 1–184（184 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LP 1–184（184 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LP 1–184（184 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LP 1–184（184 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain J2 1–184（184 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain J2 1–184（184 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain J2 1–184（184 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain J2 1–184（184 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain J2 1–184（184 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain J2 1–184（184 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

13 other PDB entries and 13 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL17_MOUSE
Isoform —
PDB entities 18
Chains and sequence ranges Author chain J2； PDBConstruct 1–153； UniProt 2–154

Large ribosomal subunit protein eL18

OrganismNot specified

UniProt P35980

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain K2； UniProt 3–188 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain P 4–188（185 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LQ 1–188（188 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LQ 1–188（188 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain K2 1–188（188 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain K2 1–188（188 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LQ 1–188（188 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LQ 1–188（188 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LQ 1–188（188 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LQ 1–188（188 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain K2 1–188（188 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain K2 1–188（188 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain K2 1–188（188 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain K2 1–188（188 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain K2 1–188（188 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain K2 1–188（188 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL18_MOUSE
Isoform —
PDB entities 19
Chains and sequence ranges Author chain K2； PDBConstruct 1–186； UniProt 3–188

Large ribosomal subunit protein eL19

OrganismNot specified

UniProt P84099

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain L2； UniProt 2–165 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain o 2–185（184 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LR 1–196（196 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LR 1–196（196 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain L2 1–196（196 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain L2 1–196（196 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LR 1–196（196 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LR 1–196（196 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LR 1–196（196 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LR 1–196（196 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain L2 1–196（196 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain L2 1–196（196 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain L2 1–196（196 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain L2 1–196（196 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain L2 1–196（196 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain L2 1–196（196 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL19_MOUSE
Isoform —
PDB entities 20
Chains and sequence ranges Author chain L2； PDBConstruct 1–164； UniProt 2–165

Large ribosomal subunit protein eL20

OrganismNot specified

UniProt P62717

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain M2； UniProt 2–176 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain Q 1–175（175 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LS 1–176（176 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LS 1–176（176 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain M2 1–176（176 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain M2 1–176（176 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LS 1–176（176 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LS 1–176（176 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LS 1–176（176 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LS 1–176（176 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain M2 1–176（176 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain M2 1–176（176 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain M2 1–176（176 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain M2 1–176（176 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain M2 1–176（176 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain M2 1–176（176 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL18A_MOUSE
Isoform —
PDB entities 21
Chains and sequence ranges Author chain M2； PDBConstruct 1–175； UniProt 2–176

Large ribosomal subunit protein eL21

OrganismNot specified

UniProt O09167

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain N2； UniProt 2–160 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain R 2–158（157 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain N2 1–160（160 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain N2 1–160（160 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LT 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LT 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LT 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LT 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain N2 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain N2 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain N2 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain N2 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain N2 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain N2 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

13 other PDB entries and 13 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL21_MOUSE
Isoform —
PDB entities 22
Chains and sequence ranges Author chain N2； PDBConstruct 1–159； UniProt 2–160

Large ribosomal subunit protein eL22

OrganismNot specified

UniProt P67984

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain O2； UniProt 17–117 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain S 16–116（101 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LU 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LU 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain O2 1–128（128 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain O2 1–128（128 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LU 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LU 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LU 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LU 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain O2 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain O2 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain O2 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain O2 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain O2 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain O2 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL22_MOUSE
Isoform —
PDB entities 23
Chains and sequence ranges Author chain O2； PDBConstruct 1–101； UniProt 17–117

60S ribosomal protein L23

OrganismNot specified

UniProt P62830

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain P2； UniProt 12–140 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain T 12–140（129 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LV 1–140（140 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LV 1–140（140 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain P2 1–140（140 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain P2 1–140（140 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LV 1–140（140 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LV 1–140（140 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LV 1–140（140 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LV 1–140（140 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain P2 1–140（140 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain P2 1–140（140 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain P2 1–140（140 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain P2 1–140（140 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain P2 1–140（140 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain P2 1–140（140 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL23_MOUSE
Isoform —
PDB entities 24
Chains and sequence ranges Author chain P2； PDBConstruct 1–129； UniProt 12–140

Large ribosomal subunit protein eL24

OrganismNot specified

UniProt Q8BP67

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain Q2； UniProt 1–62 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain U 2–63（62 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LW 1–157（157 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LW 1–157（157 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Q2 1–157（157 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Q2 1–157（157 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LW 1–157（157 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LW 1–157（157 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LW 1–157（157 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LW 1–157（157 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain Q2 1–157（157 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain Q2 1–157（157 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Q2 1–157（157 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Q2 1–157（157 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Q2 1–157（157 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain Q2 1–157（157 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL24_MOUSE
Isoform —
PDB entities 25
Chains and sequence ranges Author chain Q2； PDBConstruct 1–62； UniProt 1–62

60S ribosomal protein L23a

OrganismNot specified

UniProt P62751

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain R2； UniProt 39–156 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain V 39–156（118 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LX 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LX 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain R2 1–156（156 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain R2 1–156（156 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LX 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LX 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LX 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LX 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain R2 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain R2 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain R2 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain R2 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain R2 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain R2 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL23A_MOUSE
Isoform —
PDB entities 26
Chains and sequence ranges Author chain R2； PDBConstruct 1–118； UniProt 39–156

Large ribosomal subunit protein uL24

OrganismNot specified

UniProt P61255

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain S2； UniProt 1–134 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LY 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LY 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain S2 1–145（145 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain S2 1–145（145 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LY 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LY 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LY 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LY 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain S2 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain S2 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain S2 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain S2 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain S2 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain S2 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL26_MOUSE
Isoform —
PDB entities 27
Chains and sequence ranges Author chain S2； PDBConstruct 1–134； UniProt 1–134

Large ribosomal subunit protein eL27

OrganismNot specified

UniProt P61358

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain T2； UniProt 2–136 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LZ 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LZ 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain T2 1–136（136 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain T2 1–136（136 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LZ 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LZ 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LZ 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LZ 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain T2 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain T2 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain T2 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain T2 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain T2 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain T2 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL27_MOUSE
Isoform —
PDB entities 28
Chains and sequence ranges Author chain T2； PDBConstruct 1–135； UniProt 2–136

60S ribosomal protein L27a

OrganismNot specified

UniProt P14115

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain U2； UniProt 2–148 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain Y 2–148（147 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain La 1–148（148 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain La 1–148（148 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain U2 1–148（148 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain U2 1–148（148 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain La 1–148（148 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain La 1–148（148 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain La 1–148（148 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain La 1–148（148 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain U2 1–148（148 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain U2 1–148（148 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain U2 1–148（148 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain U2 1–148（148 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain U2 1–148（148 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain U2 1–148（148 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL27A_MOUSE
Isoform —
PDB entities 29
Chains and sequence ranges Author chain U2； PDBConstruct 1–147； UniProt 2–148

Large ribosomal subunit protein eL29

OrganismNot specified

UniProt P47915

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain V2； UniProt 2–118 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain Z 2–69（68 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lb 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lb 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain V2 1–160（160 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain V2 1–160（160 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lb 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Lb 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lb 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lb 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain V2 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain V2 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain V2 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain V2 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain V2 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain V2 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL29_MOUSE
Isoform —
PDB entities 30
Chains and sequence ranges Author chain V2； PDBConstruct 1–117； UniProt 2–118

Large ribosomal subunit protein eL30

OrganismNot specified

UniProt P62889

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain W2； UniProt 13–106 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain a 13–109（97 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lc 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lc 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain W2 1–115（115 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain W2 1–115（115 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lc 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Lc 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lc 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lc 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain W2 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain W2 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain W2 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain W2 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain W2 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain W2 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL30_MOUSE
Isoform —
PDB entities 31
Chains and sequence ranges Author chain W2； PDBConstruct 1–94； UniProt 13–106

Large ribosomal subunit protein eL31

OrganismNot specified

UniProt P62900

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain X2； UniProt 18–124 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain b 18–123（106 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Ld 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Ld 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain X2 1–125（125 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain X2 1–125（125 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Ld 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Ld 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Ld 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Ld 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain X2 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain X2 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain X2 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain X2 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain X2 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain X2 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL31_MOUSE
Isoform —
PDB entities 32
Chains and sequence ranges Author chain X2； PDBConstruct 1–107； UniProt 18–124

Large ribosomal subunit protein eL32

OrganismNot specified

UniProt P62911

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain Y2； UniProt 2–129 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain c 2–130（129 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Le 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Le 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Y2 1–135（135 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Y2 1–135（135 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Le 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Le 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Le 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Le 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain Y2 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain Y2 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Y2 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Y2 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Y2 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain Y2 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL32_MOUSE
Isoform —
PDB entities 33
Chains and sequence ranges Author chain Y2； PDBConstruct 1–128； UniProt 2–129

60S ribosomal protein L35a

OrganismNot specified

UniProt O55142

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain Z2； UniProt 2–110 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain d 2–110（109 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lf 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lf 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Z2 1–110（110 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Z2 1–110（110 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lf 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Lf 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lf 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lf 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain Z2 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain Z2 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Z2 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Z2 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Z2 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain Z2 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL35A_MOUSE
Isoform —
PDB entities 34
Chains and sequence ranges Author chain Z2； PDBConstruct 1–109； UniProt 2–110

60S ribosomal protein L34

OrganismNot specified

UniProt Q9D1R9

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain a2； UniProt 2–115 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain e 2–115（114 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lg 1–117（117 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lg 1–117（117 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain a2 1–117（117 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain a2 1–117（117 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lg 1–117（117 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Lg 1–117（117 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lg 1–117（117 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lg 1–117（117 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain a2 1–117（117 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain a2 1–117（117 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain a2 1–117（117 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain a2 1–117（117 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain a2 1–117（117 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain a2 1–117（117 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL34_MOUSE
Isoform —
PDB entities 35
Chains and sequence ranges Author chain a2； PDBConstruct 1–114； UniProt 2–115

Large ribosomal subunit protein uL29

OrganismNot specified

UniProt Q6ZWV7

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain b2； UniProt 4–123 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain f 2–123（122 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lh 1–123（123 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lh 1–123（123 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain b2 1–123（123 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain b2 1–123（123 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lh 1–123（123 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Lh 1–123（123 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lh 1–123（123 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lh 1–123（123 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain b2 1–123（123 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain b2 1–123（123 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain b2 1–123（123 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain b2 1–123（123 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain b2 1–123（123 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain b2 1–123（123 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL35_MOUSE
Isoform —
PDB entities 36
Chains and sequence ranges Author chain b2； PDBConstruct 1–120； UniProt 4–123

Large ribosomal subunit protein eL36

OrganismNot specified

UniProt P47964

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain c2； UniProt 2–103 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain g 4–101（98 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain c2 1–105（105 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain c2 1–105（105 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Li 1–105（105 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Li 1–105（105 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Li 1–105（105 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Li 1–105（105 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain c2 1–105（105 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain c2 1–105（105 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain c2 1–105（105 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain c2 1–105（105 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain c2 1–105（105 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain c2 1–105（105 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

13 other PDB entries and 13 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL36_MOUSE
Isoform —
PDB entities 37
Chains and sequence ranges Author chain c2； PDBConstruct 1–102； UniProt 2–103

Large ribosomal subunit protein eL37

OrganismNot specified

UniProt Q9D823

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain d2； UniProt 2–87 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain h 2–85（84 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lj 1–97（97 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lj 1–97（97 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain d2 1–97（97 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain d2 1–97（97 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lj 1–97（97 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Lj 1–97（97 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lj 1–97（97 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lj 1–97（97 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain d2 1–97（97 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain d2 1–97（97 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain d2 1–97（97 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain d2 1–97（97 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain d2 1–97（97 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain d2 1–97（97 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL37_MOUSE
Isoform —
PDB entities 38
Chains and sequence ranges Author chain d2； PDBConstruct 1–86； UniProt 2–87

60S ribosomal protein L38

OrganismNot specified

UniProt Q9JJI8

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain e2； UniProt 2–70 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain i 2–70（69 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lk 1–70（70 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lk 1–70（70 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain e2 1–70（70 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain e2 1–70（70 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lk 1–70（70 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Lk 1–70（70 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lk 1–70（70 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lk 1–70（70 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain e2 1–70（70 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain e2 1–70（70 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain e2 1–70（70 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain e2 1–70（70 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain e2 1–70（70 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain e2 1–70（70 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL38_MOUSE
Isoform —
PDB entities 39
Chains and sequence ranges Author chain e2； PDBConstruct 1–69； UniProt 2–70

Large ribosomal subunit protein eL39

OrganismNot specified

UniProt P62892

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain f2； UniProt 2–51 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain f2 1–51（51 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain f2 1–51（51 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
8P8N Mouse RPL39 integrated into the yeast 60S ribosomal subunit Deposited 2023-06-02 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 40 PDB declaration: 43-meric
Chain 2 1–51（51 aa）
Not recorded MG MAGNESIUM ION × 152 CL CHLORIDE ION × 20 SPD SPERMIDINE × 1 SPM SPERMINE × 1 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.6
cryo-EM vitrification conditions Cryogen ETHANE-PROPANE
Resolution 2.15 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain f2 1–51（51 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain f2 1–51（51 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain f2 1–51（51 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain f2 1–51（51 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain f2 1–51（51 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain f2 1–51（51 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

9 other PDB entries and 9 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL39_MOUSE
Isoform —
PDB entities 40
Chains and sequence ranges Author chain f2； PDBConstruct 1–50； UniProt 2–51

Large ribosomal subunit protein eL40

OrganismNot specified

UniProt P62984

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain g2； UniProt 77–128 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lm 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lm 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain g2 1–128（128 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain g2 1–128（128 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lm 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Lm 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lm 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lm 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain g2 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain g2 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain g2 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain g2 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain g2 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain g2 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL40_MOUSE
Isoform —
PDB entities 41
Chains and sequence ranges Author chain g2； PDBConstruct 1–52； UniProt 77–128

Small ribosomal subunit protein eS32

OrganismNot specified

UniProt P62947

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain h2； UniProt 1–24 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain l 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Ln 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Ln 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain h2 1–25（25 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain h2 1–25（25 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Ln 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Ln 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Ln 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Ln 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain h2 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain h2 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain h2 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain h2 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain h2 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain h2 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS32_MOUSE
Isoform —
PDB entities 42
Chains and sequence ranges Author chain h2； PDBConstruct 1–24； UniProt 1–24

Large ribosomal subunit protein eL42

OrganismNot specified

UniProt P83882

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain i2； UniProt 2–104 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lo 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lo 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain i2 1–106（106 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain i2 1–106（106 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lo 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Lo 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lo 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lo 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain i2 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain i2 1–104（104 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain i2 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain i2 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain i2 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain i2 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL36A_MOUSE
Isoform —
PDB entities 43
Chains and sequence ranges Author chain i2； PDBConstruct 1–103； UniProt 2–104

Large ribosomal subunit protein eL43

OrganismNot specified

UniProt P61514

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain j2； UniProt 4–92 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lp 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lp 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain j2 1–92（92 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain j2 1–92（92 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lp 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Lp 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lp 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lp 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain j2 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain j2 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain j2 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain j2 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain j2 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain j2 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL37A_MOUSE
Isoform —
PDB entities 44
Chains and sequence ranges Author chain j2； PDBConstruct 1–89； UniProt 4–92

Large ribosomal subunit protein eL28

OrganismNot specified

UniProt P41105

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain k2； UniProt 2–126 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain p 2–123（122 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lr 1–137（137 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lr 1–137（137 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain k2 1–137（137 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain k2 1–137（137 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lr 1–137（137 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Lr 1–137（137 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lr 1–137（137 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lr 1–137（137 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain k2 1–137（137 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain k2 1–137（137 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain k2 1–137（137 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain k2 1–137（137 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain k2 1–137（137 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain k2 1–137（137 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL28_MOUSE
Isoform —
PDB entities 45
Chains and sequence ranges Author chain k2； PDBConstruct 1–125； UniProt 2–126

Small ribosomal subunit protein eS1

OrganismNot specified

UniProt P97351

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain p2； UniProt 21–234 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SB 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SB 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain p2 1–264（264 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain p2 1–264（264 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
7NWI Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S Deposited 2021-03-16 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 78 PDB declaration: 84-meric
Chain BB 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 210 ZN ZINC ION × 5 BLS BLASTICIDIN S × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4；50 mM HEPES pH 7.4 100 mM KOAc 5 mM Mg(Oac)2 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE；30s sample incubation on grid followed by 1.1s blotting time.
Resolution 3.13 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SB 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SB 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SB 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SB 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain p2 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain p2 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain p2 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain p2 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain p2 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain p2 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS3A_MOUSE
Isoform —
PDB entities 48
Chains and sequence ranges Author chain p2； PDBConstruct 1–214； UniProt 21–234

Small ribosomal subunit protein uS3

OrganismNot specified

UniProt P62908

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain q2； UniProt 2–227 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SD 1–243（243 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SD 1–243（243 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain q2 1–243（243 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain q2 1–243（243 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SD 1–243（243 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SD 1–243（243 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SD 1–243（243 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SD 1–243（243 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain q2 1–243（243 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain q2 1–243（243 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain q2 1–243（243 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain q2 1–243（243 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain q2 1–243（243 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain q2 1–243（243 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS3_MOUSE
Isoform —
PDB entities 49
Chains and sequence ranges Author chain q2； PDBConstruct 1–226； UniProt 2–227

Small ribosomal subunit protein eS4

OrganismNot specified

UniProt P62702

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain r2； UniProt 2–263 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SE 1–263（263 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SE 1–263（263 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain r2 1–263（263 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain r2 1–263（263 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SE 1–263（263 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SE 1–263（263 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SE 1–263（263 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SE 1–263（263 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain r2 1–263（263 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain r2 1–263（263 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain r2 2–258（257 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain r2 2–258（257 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain r2 1–263（263 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

13 other PDB entries and 13 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS4X_MOUSE
Isoform —
PDB entities 50
Chains and sequence ranges Author chain r2； PDBConstruct 1–262； UniProt 2–263

Small ribosomal subunit protein uS17

OrganismNot specified

UniProt P62281

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain w2； UniProt 2–154 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SL 1–158（158 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SL 1–158（158 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain w2 1–158（158 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain w2 1–158（158 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SL 1–158（158 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SL 1–158（158 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SL 1–158（158 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SL 1–158（158 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain w2 1–158（158 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain w2 1–158（158 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain w2 1–158（158 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain w2 1–158（158 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain w2 1–158（158 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain w2 1–158（158 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS11_MOUSE
Isoform —
PDB entities 51
Chains and sequence ranges Author chain w2； PDBConstruct 1–153； UniProt 2–154

Small ribosomal subunit protein uS2

OrganismNot specified

UniProt P14206

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain o2； UniProt 3–216 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SA 1–295（295 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SA 1–295（295 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain o2 1–295（295 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain o2 1–295（295 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SA 1–295（295 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SA 1–295（295 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SA 1–295（295 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SA 1–295（295 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain o2 1–295（295 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain o2 1–295（295 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain o2 1–295（295 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain o2 1–295（295 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain o2 1–295（295 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain o2 1–295（295 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RSSA_MOUSE
Isoform —
PDB entities 53
Chains and sequence ranges Author chain o2； PDBConstruct 1–214； UniProt 3–216

Small ribosomal subunit protein uS19

OrganismNot specified

UniProt P62843

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain x2； UniProt 8–137 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SP 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SP 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain x2 1–145（145 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain x2 1–145（145 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SP 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SP 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SP 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SP 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain x2 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain x2 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain x2 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain x2 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain x2 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain x2 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS15_MOUSE
Isoform —
PDB entities 56
Chains and sequence ranges Author chain x2； PDBConstruct 1–130； UniProt 8–137

Small ribosomal subunit protein uS9

OrganismNot specified

UniProt P14131

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain y2； UniProt 3–146 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SQ 1–146（146 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SQ 1–146（146 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain y2 1–146（146 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain y2 1–146（146 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SQ 1–146（146 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SQ 1–146（146 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SQ 1–146（146 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SQ 1–146（146 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain y2 1–146（146 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain y2 1–146（146 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain y2 1–146（146 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain y2 1–146（146 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain y2 1–146（146 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain y2 1–146（146 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS16_MOUSE
Isoform —
PDB entities 57
Chains and sequence ranges Author chain y2； PDBConstruct 1–144； UniProt 3–146

Small ribosomal subunit protein uS13

OrganismNot specified

UniProt P62270

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain A3； UniProt 2–145 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SS 1–152（152 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SS 1–152（152 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain A3 1–152（152 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain A3 1–152（152 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SS 1–152（152 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SS 1–152（152 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SS 1–152（152 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SS 1–152（152 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain A3 1–152（152 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain A3 1–152（152 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain A3 1–152（152 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain A3 1–152（152 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain A3 1–152（152 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain A3 1–152（152 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS18_MOUSE
Isoform —
PDB entities 58
Chains and sequence ranges Author chain A3； PDBConstruct 1–144； UniProt 2–145

Small ribosomal subunit protein eS19

OrganismNot specified

UniProt Q9CZX8

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain B3； UniProt 4–144 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain ST 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain ST 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain B3 1–145（145 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain B3 1–145（145 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain ST 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain ST 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain ST 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain ST 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain B3 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain B3 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain B3 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain B3 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain B3 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

13 other PDB entries and 13 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS19_MOUSE
Isoform —
PDB entities 59
Chains and sequence ranges Author chain B3； PDBConstruct 1–141； UniProt 4–144

Small ribosomal subunit protein eS21

OrganismNot specified

UniProt Q9CQR2

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain D3； UniProt 1–83 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SV 1–83（83 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SV 1–83（83 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain D3 1–83（83 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain D3 1–83（83 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SV 1–83（83 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SV 1–83（83 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SV 1–83（83 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SV 1–83（83 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain D3 1–83（83 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain D3 1–83（83 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain D3 1–83（83 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain D3 1–83（83 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain D3 1–83（83 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

13 other PDB entries and 13 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS21_MOUSE
Isoform —
PDB entities 61
Chains and sequence ranges Author chain D3； PDBConstruct 1–83； UniProt 1–83

Small ribosomal subunit protein uS12

OrganismNot specified

UniProt P62267

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain E3； UniProt 2–142 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SX 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SX 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain E3 1–143（143 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain E3 1–143（143 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SX 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SX 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SX 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SX 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain E3 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain E3 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain E3 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain E3 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain E3 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain E3 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS23_MOUSE
Isoform —
PDB entities 62
Chains and sequence ranges Author chain E3； PDBConstruct 1–141； UniProt 2–142

Small ribosomal subunit protein uS14

OrganismNot specified

UniProt P62274

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain H3； UniProt 3–56 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Sd 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Sd 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain H3 1–56（56 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain H3 1–56（56 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Sd 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Sd 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Sd 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Sd 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain H3 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain H3 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain H3 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain H3 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain H3 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain H3 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS29_MOUSE
Isoform —
PDB entities 64
Chains and sequence ranges Author chain H3； PDBConstruct 1–54； UniProt 3–56

Small ribosomal subunit protein uS5

OrganismNot specified

UniProt P25444

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain J3； UniProt 59–280 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SC 1–293（293 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SC 1–293（293 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain J3 1–293（293 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain J3 1–293（293 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SC 1–293（293 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SC 1–293（293 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SC 1–293（293 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SC 1–293（293 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain J3 1–293（293 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain J3 1–293（293 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain J3 1–293（293 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain J3 1–293（293 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain J3 1–293（293 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain J3 1–293（293 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS2_MOUSE
Isoform —
PDB entities 66
Chains and sequence ranges Author chain J3； PDBConstruct 1–222； UniProt 59–280

Small ribosomal subunit protein uS4

OrganismNot specified

UniProt Q6ZWN5

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain L3； UniProt 2–186 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SJ 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SJ 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain L3 1–194（194 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain L3 1–194（194 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SJ 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SJ 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SJ 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SJ 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain L3 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain L3 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain L3 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain L3 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain L3 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain L3 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS9_MOUSE
Isoform —
PDB entities 68
Chains and sequence ranges Author chain L3； PDBConstruct 1–185； UniProt 2–186

Small ribosomal subunit protein uS15

OrganismNot specified

UniProt P62301

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain N3； UniProt 2–151 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SN 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SN 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain N3 1–151（151 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain N3 1–151（151 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SN 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SN 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SN 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SN 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain N3 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain N3 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain N3 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain N3 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain N3 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain N3 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS13_MOUSE
Isoform —
PDB entities 69
Chains and sequence ranges Author chain N3； PDBConstruct 1–150； UniProt 2–151

Small ribosomal subunit protein uS8

OrganismNot specified

UniProt P62245

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain P3； UniProt 2–130 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SW 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SW 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain P3 1–130（130 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain P3 1–130（130 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SW 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SW 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SW 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SW 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain P3 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain P3 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain P3 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain P3 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain P3 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain P3 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS15A_MOUSE
Isoform —
PDB entities 70
Chains and sequence ranges Author chain P3； PDBConstruct 1–129； UniProt 2–130

Small ribosomal subunit protein eS24

OrganismNot specified

UniProt P62849

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain Q3； UniProt 2–130 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SY 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SY 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Q3 1–133（133 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Q3 1–133（133 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SY 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SY 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SY 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SY 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain Q3 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain Q3 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Q3 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Q3 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Q3 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain Q3 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS24_MOUSE
Isoform —
PDB entities 71
Chains and sequence ranges Author chain Q3； PDBConstruct 1–129； UniProt 2–130

Small ribosomal subunit protein eS27-like

OrganismNot specified

UniProt Q6ZWY3

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain S3； UniProt 2–84 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain S3 1–84（84 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain S3 1–84（84 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å

2 other PDB entries and 2 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS27L_MOUSE
Isoform —
PDB entities 72
Chains and sequence ranges Author chain S3； PDBConstruct 1–83； UniProt 2–84

Small ribosomal subunit protein eS26

OrganismNot specified

UniProt P62855

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain F3； UniProt 2–98 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein uS11 × 1 （P62264） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Sa 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Sa 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain F3 1–115（115 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain F3 1–115（115 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Sa 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Sa 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Sa 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Sa 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain F3 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain F3 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain F3 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain F3 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain F3 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain F3 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS26_MOUSE
Isoform —
PDB entities 75
Chains and sequence ranges Author chain F3； PDBConstruct 1–97； UniProt 2–98

Small ribosomal subunit protein uS11

OrganismNot specified

UniProt P62264

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 70 RNA 6 PDB declaration: 76-meric（76） Consistent with all polymer counts Chain O3； UniProt 18–150 Not recorded Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） 60S ribosomal protein L14 × 1 （Q9CR57） 60S ribosomal protein L15 × 1 （Q9CZM2） 28S ribosomal RNA × 1 5S ribosomal RNA × 1 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） 60S ribosomal protein L6 × 1 Large ribosomal subunit protein uL13 × 1 （P19253） 60S ribosomal protein L17 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） 60S ribosomal protein L23 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） 60S ribosomal protein L23a × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） 60S ribosomal protein L27a × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） 60S ribosomal protein L35a × 1 （O55142） 60S ribosomal protein L34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） 60S ribosomal protein L38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39 × 1 （P62892） Large ribosomal subunit protein eL40 × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） 18S ribosomal RNA × 1 Transfer RNA × 1 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS17 × 1 （P62281） 40S ribosomal protein S17 × 1 Small ribosomal subunit protein uS2 × 1 （P14206） 40S ribosomal protein S5 × 1 40S ribosomal protein S10 × 1 Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） 40S ribosomal protein S20 × 1 Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） 40S ribosomal protein S28 × 1 Small ribosomal subunit protein uS14 × 1 （P62274） Receptor of activated protein C kinase 1 × 1 Small ribosomal subunit protein uS5 × 1 （P25444） 40S ribosomal protein S6 × 1 Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS27-like × 1 （Q6ZWY3） 40S ribosomal protein S30 × 1 Messenger RNA × 1 Small ribosomal subunit protein eS26 × 1 （P62855） ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE；1,2 second blotting Resolution 2.46 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9H4N Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SO 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SO 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain O3 1–151（151 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain O3 1–151（151 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SO 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SO 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SO 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9KDW Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SO 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.67 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain O3 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain O3 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain O3 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain O3 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain O3 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain O3 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS14_MOUSE
Isoform —
PDB entities 76
Chains and sequence ranges Author chain O3； PDBConstruct 1–133； UniProt 18–150

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 9h4n

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 9h4n
Download Download
▼

2. Structure Basics 2. Structure Basics

Entry ID entry_id9h4n
Deposition date deposition_date2024-10-21
Structure title titleRPL13 (eL13)-mutant 80S ribosome from mouse
Keywords keywordsMouse liver 80S ribosome, Spondyloepimetaphyseal dysplasia, RPL13 (eL13) mutation, RIBOSOME; RIBOSOME
Experimental Method methodELECTRON MICROSCOPY
▼

3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier93.36 Å
Radius of gyration Rg (electron density) rg_electron94.16 Å
Forward intensity I(0) i0267979000000.00
Molecular weight molecular_weight3017500.0 kDa
Excluded volume excluded_volume3197700 ų
Envelope volume envelope_volume5539100 ų
Hydration-shell volume shell_volume443990 ų
Envelope diameter envelope_diameter310.9 Å
Shell Rg shell_rg110.80 Å
Envelope Rg envelope_rg93.47 Å
Shape Rg shape_rg94.21 Å
Total Rg total_rg94.11 Å
Total atoms total_atoms204044
Residues n_residues15871
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 Å−1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3
▼

4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax238.4 Å
Rg (real space) rg_real90.66 Å
Rg uncertainty (real space) rg_real_error0.36 Å
I(0) (real space) i0_real2.5670e+11
I(0) uncertainty (real space) i0_real_error4.0810e+09
Rg (reciprocal space) rg_reciprocal95.00 Å
I(0) (reciprocal space) i0_reciprocal269400000000.0000
Solution quality estimate total_estimate0.9123
Solution quality rating solution_quality EXCELLENT a EXCELLENT solution
P(r) peaks n_peaks1
Primary peak position r_peak_primary112.2 Å
Skewness Skewness skewness0.109
Kurtosis Kurtosis kurtosis-0.614
Angular range angular_range— – 0.0850 Å−1
Current regularization parameter α current_alpha0.7538
Highest regularization parameter α highest_alpha17580000000.0000
Real-space data points n_real_points18
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.000; Oscil: 0.998; Stabil: 0.966; Sysdev: 1.000; Positv: 1.000; Valcen: 0.974; Smooth: 0.000
▶

5. Crystallography and Experiment 5. Crystallography & Experiment

▶

6. Entities and Polymers Entities & Polymers (79)

▶

8. Citations (1)

▶

9. Files and Curves (10)