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9kdw

Cryo-EM structure of 80S ribosome

Method: ELECTRON MICROSCOPY Dmax: 243.2 Å Quality: EXCELLENT
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1. Protein Identity and Related Structures Protein Identity & Related Structures

Large ribosomal subunit protein uL2

OrganismNot specified

UniProt P62918

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LA； UniProt 1–257 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain A 2–253（252 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LA 1–257（257 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LA 1–257（257 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain D2 1–257（257 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain D2 1–257（257 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain D2 2–252（251 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LA 1–257（257 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LA 1–257（257 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LA 1–257（257 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain D2 1–257（257 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain D2 1–257（257 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain D2 1–257（257 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain D2 1–257（257 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain D2 1–257（257 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain D2 1–257（257 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL8_MOUSE
Isoform —
PDB entities 4
Chains and sequence ranges Author chain LA； PDBConstruct 1–257； UniProt 1–257

Large ribosomal subunit protein uL3

OrganismNot specified

UniProt P27659

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LB； UniProt 1–403 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain B 2–395（394 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LB 1–403（403 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LB 1–403（403 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain E2 1–403（403 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain E2 1–403（403 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain E2 2–403（402 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LB 1–403（403 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LB 1–403（403 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LB 1–403（403 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain E2 1–403（403 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain E2 1–403（403 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain E2 1–403（403 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain E2 1–403（403 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain E2 1–403（403 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain E2 1–403（403 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL3_MOUSE
Isoform —
PDB entities 5
Chains and sequence ranges Author chain LB； PDBConstruct 1–403； UniProt 1–403

Large ribosomal subunit protein uL4

OrganismNot specified

UniProt Q9D8E6

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LC； UniProt 1–419 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain C 3–365（363 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LC 1–419（419 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LC 1–419（419 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain F2 1–419（419 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain F2 1–419（419 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain F2 2–360（359 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LC 1–419（419 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LC 1–419（419 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LC 1–419（419 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain F2 1–419（419 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain F2 1–419（419 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain F2 1–419（419 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain F2 1–419（419 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain F2 1–419（419 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain F2 1–419（419 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL4_MOUSE
Isoform —
PDB entities 6
Chains and sequence ranges Author chain LC； PDBConstruct 1–419； UniProt 1–419

Large ribosomal subunit protein uL18

OrganismNot specified

UniProt P47962

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LD； UniProt 1–297 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain D 4–297（294 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LD 1–297（297 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LD 1–297（297 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain G2 1–297（297 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain G2 1–297（297 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain G2 2–294（293 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LD 1–297（297 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LD 1–297（297 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LD 1–297（297 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain G2 1–297（297 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain G2 1–297（297 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain G2 1–297（297 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain G2 1–297（297 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain G2 1–297（297 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain G2 1–297（297 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL5_MOUSE
Isoform —
PDB entities 7
Chains and sequence ranges Author chain LD； PDBConstruct 1–297； UniProt 1–297

Large ribosomal subunit protein eL6

OrganismNot specified

UniProt P47911

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LE； UniProt 1–296 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain E 103–296（194 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LE 1–296（296 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LE 1–296（296 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain H2 1–296（296 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain H2 1–296（296 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LE 1–296（296 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LE 1–296（296 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LE 1–296（296 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain H2 1–296（296 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain H2 1–296（296 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain H2 1–296（296 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain H2 1–296（296 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain H2 1–296（296 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain H2 1–296（296 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL6_MOUSE
Isoform —
PDB entities 8
Chains and sequence ranges Author chain LE； PDBConstruct 1–296； UniProt 1–296

Large ribosomal subunit protein uL30

OrganismNot specified

UniProt P14148

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LF； UniProt 1–270 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain F 37–270（234 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LF 1–270（270 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LF 1–270（270 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain A1 1–270（270 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain A1 1–270（270 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain A1 49–270（222 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LF 1–270（270 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LF 1–270（270 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LF 1–270（270 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain A1 1–270（270 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain A1 1–270（270 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain A1 1–270（270 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain A1 1–270（270 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain A1 1–270（270 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain A1 1–270（270 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL7_MOUSE
Isoform —
PDB entities 9
Chains and sequence ranges Author chain LF； PDBConstruct 1–270； UniProt 1–270

Large ribosomal subunit protein eL8

OrganismNot specified

UniProt P12970

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LG； UniProt 1–266 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain G 29–262（234 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LG 1–266（266 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LG 1–266（266 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain B1 1–266（266 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain B1 1–266（266 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain B1 28–259（232 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LG 1–266（266 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LG 1–266（266 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LG 1–266（266 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain B1 1–266（266 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain B1 1–266（266 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain B1 1–266（266 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain B1 1–266（266 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain B1 1–266（266 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain B1 1–266（266 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL7A_MOUSE
Isoform —
PDB entities 10
Chains and sequence ranges Author chain LG； PDBConstruct 1–266； UniProt 1–266

Large ribosomal subunit protein uL6

OrganismNot specified

UniProt P51410

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LH； UniProt 1–192 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain H 1–191（191 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LH 1–192（192 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LH 1–192（192 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain C1 1–192（192 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain C1 1–192（192 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain C1 1–190（190 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different construct Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LH 1–190（190 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LH 1–192（192 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LH 1–192（192 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain C1 1–192（192 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain C1 1–192（192 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain C1 1–192（192 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain C1 1–192（192 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain C1 1–192（192 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain C1 1–192（192 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL9_MOUSE
Isoform —
PDB entities 11
Chains and sequence ranges Author chain LH； PDBConstruct 1–192； UniProt 1–192

Large ribosomal subunit protein uL16-like

OrganismNot specified

UniProt P86048

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LI； UniProt 1–214 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LI 1–214（214 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain D1 1–214（214 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain D1 1–214（214 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain D1 2–214（213 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LI 1–214（214 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LI 1–214（214 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LI 1–214（214 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å

7 other PDB entries and 7 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL10L_MOUSE
Isoform —
PDB entities 12
Chains and sequence ranges Author chain LI； PDBConstruct 1–214； UniProt 1–214

Large ribosomal subunit protein uL5

OrganismNot specified

UniProt Q9CXW4

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LJ； UniProt 1–178 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain J 9–177（169 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LJ 1–178（178 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LJ 1–178（178 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain E1 1–178（178 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain E1 1–178（178 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain E1 3–176（174 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LJ 1–178（178 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LJ 1–178（178 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LJ 1–178（178 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain E1 1–178（178 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain E1 1–178（178 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain E1 1–178（178 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain E1 1–178（178 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain E1 1–178（178 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain E1 1–178（178 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL11_MOUSE
Isoform —
PDB entities 13
Chains and sequence ranges Author chain LJ； PDBConstruct 1–178； UniProt 1–178

Large ribosomal subunit protein eL13

OrganismNot specified

UniProt P47963

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LL； UniProt 1–211 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain K 2–206（205 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LL 1–211（211 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LL 1–211（211 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain F1 1–211（211 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain F1 1–211（211 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain F1 2–204（203 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LL 1–211（211 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LL 1–211（211 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LL 1–211（211 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain F1 2–204（203 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain F1 1–211（211 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain F1 1–211（211 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain F1 1–211（211 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain F1 1–211（211 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain F1 1–211（211 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL13_MOUSE
Isoform —
PDB entities 14
Chains and sequence ranges Author chain LL； PDBConstruct 1–211； UniProt 1–211

Large ribosomal subunit protein eL14

OrganismNot specified

UniProt Q9CR57

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LM； UniProt 1–217 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain L 2–140（139 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LM 1–217（217 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LM 1–217（217 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain G1 1–217（217 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain G1 1–217（217 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain G1 2–140（139 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LM 1–217（217 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LM 1–217（217 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LM 1–217（217 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain G1 1–217（217 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain G1 1–217（217 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain G1 1–217（217 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain G1 1–217（217 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain G1 1–217（217 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain G1 1–217（217 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL14_MOUSE
Isoform —
PDB entities 15
Chains and sequence ranges Author chain LM； PDBConstruct 1–217； UniProt 1–217

Large ribosomal subunit protein eL15

OrganismNot specified

UniProt Q9CZM2

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LN； UniProt 1–204 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain M 2–204（203 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LN 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LN 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain H1 1–204（204 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain H1 1–204（204 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain H1 2–204（203 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LN 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LN 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LN 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain H1 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain H1 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain H1 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain H1 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain H1 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain H1 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL15_MOUSE
Isoform —
PDB entities 16
Chains and sequence ranges Author chain LN； PDBConstruct 1–204； UniProt 1–204

Large ribosomal subunit protein uL13

OrganismNot specified

UniProt P19253

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LO； UniProt 1–203 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain N 5–199（195 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LO 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LO 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain I2 1–203（203 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain I2 1–203（203 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain I2 3–203（201 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LO 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LO 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LO 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain I2 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain I2 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain I2 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain I2 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain I2 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain I2 1–203（203 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL13A_MOUSE
Isoform —
PDB entities 17
Chains and sequence ranges Author chain LO； PDBConstruct 1–203； UniProt 1–203

Large ribosomal subunit protein uL22

OrganismNot specified

UniProt Q9CPR4

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LP； UniProt 1–184 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain O 2–154（153 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain J2 1–184（184 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain J2 1–184（184 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain J2 2–154（153 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LP 1–184（184 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LP 1–184（184 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LP 1–184（184 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain J2 1–184（184 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain J2 1–184（184 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain J2 1–184（184 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain J2 1–184（184 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain J2 1–184（184 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain J2 1–184（184 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

13 other PDB entries and 13 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL17_MOUSE
Isoform —
PDB entities 18
Chains and sequence ranges Author chain LP； PDBConstruct 1–184； UniProt 1–184

Large ribosomal subunit protein eL18

OrganismNot specified

UniProt P35980

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LQ； UniProt 1–188 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain P 4–188（185 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LQ 1–188（188 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LQ 1–188（188 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain K2 1–188（188 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain K2 1–188（188 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain K2 3–188（186 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LQ 1–188（188 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LQ 1–188（188 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LQ 1–188（188 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain K2 1–188（188 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain K2 1–188（188 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain K2 1–188（188 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain K2 1–188（188 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain K2 1–188（188 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain K2 1–188（188 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL18_MOUSE
Isoform —
PDB entities 19
Chains and sequence ranges Author chain LQ； PDBConstruct 1–188； UniProt 1–188

Large ribosomal subunit protein eL19

OrganismNot specified

UniProt P84099

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LR； UniProt 1–196 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain o 2–185（184 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LR 1–196（196 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LR 1–196（196 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain L2 1–196（196 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain L2 1–196（196 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain L2 2–165（164 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LR 1–196（196 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LR 1–196（196 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LR 1–196（196 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain L2 1–196（196 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain L2 1–196（196 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain L2 1–196（196 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain L2 1–196（196 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain L2 1–196（196 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain L2 1–196（196 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL19_MOUSE
Isoform —
PDB entities 20
Chains and sequence ranges Author chain LR； PDBConstruct 1–196； UniProt 1–196

Large ribosomal subunit protein eL20

OrganismNot specified

UniProt P62717

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LS； UniProt 1–176 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain Q 1–175（175 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LS 1–176（176 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LS 1–176（176 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain M2 1–176（176 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain M2 1–176（176 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain M2 2–176（175 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LS 1–176（176 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LS 1–176（176 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LS 1–176（176 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain M2 1–176（176 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain M2 1–176（176 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain M2 1–176（176 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain M2 1–176（176 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain M2 1–176（176 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain M2 1–176（176 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL18A_MOUSE
Isoform —
PDB entities 21
Chains and sequence ranges Author chain LS； PDBConstruct 1–176； UniProt 1–176

Large ribosomal subunit protein eL21

OrganismNot specified

UniProt O09167

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LT； UniProt 1–160 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain R 2–158（157 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain N2 1–160（160 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain N2 1–160（160 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain N2 2–160（159 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LT 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LT 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LT 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain N2 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain N2 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain N2 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain N2 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain N2 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain N2 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

13 other PDB entries and 13 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL21_MOUSE
Isoform —
PDB entities 22
Chains and sequence ranges Author chain LT； PDBConstruct 1–160； UniProt 1–160

Large ribosomal subunit protein eL22

OrganismNot specified

UniProt P67984

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LU； UniProt 1–128 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain S 16–116（101 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LU 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LU 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain O2 1–128（128 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain O2 1–128（128 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain O2 17–117（101 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LU 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LU 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LU 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain O2 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain O2 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain O2 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain O2 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain O2 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain O2 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL22_MOUSE
Isoform —
PDB entities 23
Chains and sequence ranges Author chain LU； PDBConstruct 1–128； UniProt 1–128

Large ribosomal subunit protein uL14

OrganismNot specified

UniProt P62830

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LV； UniProt 1–140 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain T 12–140（129 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LV 1–140（140 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LV 1–140（140 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain P2 1–140（140 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain P2 1–140（140 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain P2 12–140（129 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LV 1–140（140 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LV 1–140（140 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LV 1–140（140 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain P2 1–140（140 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain P2 1–140（140 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain P2 1–140（140 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain P2 1–140（140 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain P2 1–140（140 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain P2 1–140（140 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL23_MOUSE
Isoform —
PDB entities 24
Chains and sequence ranges Author chain LV； PDBConstruct 1–140； UniProt 1–140

Large ribosomal subunit protein eL24

OrganismNot specified

UniProt Q8BP67

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LW； UniProt 1–157 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain U 2–63（62 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LW 1–157（157 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LW 1–157（157 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Q2 1–157（157 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Q2 1–157（157 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain Q2 1–62（62 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LW 1–157（157 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LW 1–157（157 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LW 1–157（157 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain Q2 1–157（157 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain Q2 1–157（157 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Q2 1–157（157 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Q2 1–157（157 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Q2 1–157（157 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain Q2 1–157（157 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL24_MOUSE
Isoform —
PDB entities 25
Chains and sequence ranges Author chain LW； PDBConstruct 1–157； UniProt 1–157

Large ribosomal subunit protein uL23

OrganismNot specified

UniProt P62751

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LX； UniProt 1–156 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain V 39–156（118 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LX 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LX 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain R2 1–156（156 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain R2 1–156（156 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain R2 39–156（118 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LX 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LX 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LX 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain R2 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain R2 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain R2 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain R2 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain R2 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain R2 1–156（156 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL23A_MOUSE
Isoform —
PDB entities 26
Chains and sequence ranges Author chain LX； PDBConstruct 1–156； UniProt 1–156

Large ribosomal subunit protein uL24

OrganismNot specified

UniProt P61255

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LY； UniProt 1–145 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LY 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LY 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain S2 1–145（145 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain S2 1–145（145 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain S2 1–134（134 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LY 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LY 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LY 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain S2 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain S2 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain S2 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain S2 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain S2 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain S2 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL26_MOUSE
Isoform —
PDB entities 27
Chains and sequence ranges Author chain LY； PDBConstruct 1–145； UniProt 1–145

Large ribosomal subunit protein eL27

OrganismNot specified

UniProt P61358

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain LZ； UniProt 1–136 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LZ 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain LZ 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain T2 1–136（136 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain T2 1–136（136 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain T2 2–136（135 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LZ 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain LZ 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain LZ 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain T2 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain T2 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain T2 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain T2 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain T2 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain T2 1–136（136 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL27_MOUSE
Isoform —
PDB entities 28
Chains and sequence ranges Author chain LZ； PDBConstruct 1–136； UniProt 1–136

Large ribosomal subunit protein uL15

OrganismNot specified

UniProt P14115

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain La； UniProt 1–148 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain Y 2–148（147 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain La 1–148（148 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain La 1–148（148 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain U2 1–148（148 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain U2 1–148（148 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain U2 2–148（147 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain La 1–148（148 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain La 1–148（148 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain La 1–148（148 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain U2 1–148（148 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain U2 1–148（148 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain U2 1–148（148 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain U2 1–148（148 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain U2 1–148（148 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain U2 1–148（148 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL27A_MOUSE
Isoform —
PDB entities 29
Chains and sequence ranges Author chain La； PDBConstruct 1–148； UniProt 1–148

Large ribosomal subunit protein eL29

OrganismNot specified

UniProt P47915

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain Lb； UniProt 1–160 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain Z 2–69（68 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lb 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lb 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain V2 1–160（160 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain V2 1–160（160 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain V2 2–118（117 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lb 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Lb 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lb 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain V2 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain V2 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain V2 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain V2 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain V2 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain V2 1–160（160 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL29_MOUSE
Isoform —
PDB entities 30
Chains and sequence ranges Author chain Lb； PDBConstruct 1–160； UniProt 1–160

Large ribosomal subunit protein eL30

OrganismNot specified

UniProt P62889

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain Lc； UniProt 1–115 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain a 13–109（97 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lc 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lc 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain W2 1–115（115 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain W2 1–115（115 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain W2 13–106（94 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lc 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Lc 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lc 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain W2 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain W2 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain W2 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain W2 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain W2 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain W2 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL30_MOUSE
Isoform —
PDB entities 31
Chains and sequence ranges Author chain Lc； PDBConstruct 1–115； UniProt 1–115

Large ribosomal subunit protein eL31

OrganismNot specified

UniProt P62900

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain Ld； UniProt 1–125 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain b 18–123（106 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Ld 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Ld 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain X2 1–125（125 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain X2 1–125（125 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain X2 18–124（107 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Ld 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Ld 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Ld 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain X2 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain X2 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain X2 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain X2 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain X2 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain X2 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL31_MOUSE
Isoform —
PDB entities 32
Chains and sequence ranges Author chain Ld； PDBConstruct 1–125； UniProt 1–125

Large ribosomal subunit protein eL32

OrganismNot specified

UniProt P62911

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain Le； UniProt 1–135 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain c 2–130（129 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Le 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Le 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Y2 1–135（135 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Y2 1–135（135 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain Y2 2–129（128 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Le 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Le 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Le 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain Y2 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain Y2 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Y2 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Y2 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Y2 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain Y2 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL32_MOUSE
Isoform —
PDB entities 33
Chains and sequence ranges Author chain Le； PDBConstruct 1–135； UniProt 1–135

Large ribosomal subunit protein eL33

OrganismNot specified

UniProt O55142

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain Lf； UniProt 1–110 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain d 2–110（109 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lf 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lf 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Z2 1–110（110 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Z2 1–110（110 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain Z2 2–110（109 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lf 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Lf 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lf 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain Z2 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain Z2 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Z2 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Z2 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Z2 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain Z2 1–110（110 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL35A_MOUSE
Isoform —
PDB entities 34
Chains and sequence ranges Author chain Lf； PDBConstruct 1–110； UniProt 1–110

Large ribosomal subunit protein eL34

OrganismNot specified

UniProt Q9D1R9

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain Lg； UniProt 1–117 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain e 2–115（114 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lg 1–117（117 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lg 1–117（117 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain a2 1–117（117 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain a2 1–117（117 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain a2 2–115（114 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lg 1–117（117 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Lg 1–117（117 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lg 1–117（117 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain a2 1–117（117 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain a2 1–117（117 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain a2 1–117（117 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain a2 1–117（117 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain a2 1–117（117 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain a2 1–117（117 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL34_MOUSE
Isoform —
PDB entities 35
Chains and sequence ranges Author chain Lg； PDBConstruct 1–117； UniProt 1–117

Large ribosomal subunit protein uL29

OrganismNot specified

UniProt Q6ZWV7

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain Lh； UniProt 1–123 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain f 2–123（122 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lh 1–123（123 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lh 1–123（123 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain b2 1–123（123 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain b2 1–123（123 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain b2 4–123（120 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lh 1–123（123 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Lh 1–123（123 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lh 1–123（123 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain b2 1–123（123 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain b2 1–123（123 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain b2 1–123（123 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain b2 1–123（123 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain b2 1–123（123 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain b2 1–123（123 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL35_MOUSE
Isoform —
PDB entities 36
Chains and sequence ranges Author chain Lh； PDBConstruct 1–123； UniProt 1–123

Large ribosomal subunit protein eL36

OrganismNot specified

UniProt P47964

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain Li； UniProt 1–105 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain g 4–101（98 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain c2 1–105（105 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain c2 1–105（105 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain c2 2–103（102 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Li 1–105（105 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Li 1–105（105 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Li 1–105（105 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain c2 1–105（105 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain c2 1–105（105 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain c2 1–105（105 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain c2 1–105（105 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain c2 1–105（105 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain c2 1–105（105 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

13 other PDB entries and 13 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL36_MOUSE
Isoform —
PDB entities 37
Chains and sequence ranges Author chain Li； PDBConstruct 1–105； UniProt 1–105

Large ribosomal subunit protein eL37

OrganismNot specified

UniProt Q9D823

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain Lj； UniProt 1–97 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain h 2–85（84 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lj 1–97（97 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lj 1–97（97 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain d2 1–97（97 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain d2 1–97（97 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain d2 2–87（86 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lj 1–97（97 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Lj 1–97（97 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lj 1–97（97 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain d2 1–97（97 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain d2 1–97（97 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain d2 1–97（97 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain d2 1–97（97 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain d2 1–97（97 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain d2 1–97（97 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL37_MOUSE
Isoform —
PDB entities 38
Chains and sequence ranges Author chain Lj； PDBConstruct 1–97； UniProt 1–97

Large ribosomal subunit protein eL38

OrganismNot specified

UniProt Q9JJI8

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain Lk； UniProt 1–70 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain i 2–70（69 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lk 1–70（70 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lk 1–70（70 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain e2 1–70（70 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain e2 1–70（70 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain e2 2–70（69 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lk 1–70（70 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Lk 1–70（70 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lk 1–70（70 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain e2 1–70（70 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain e2 1–70（70 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain e2 1–70（70 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain e2 1–70（70 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain e2 1–70（70 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain e2 1–70（70 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL38_MOUSE
Isoform —
PDB entities 39
Chains and sequence ranges Author chain Lk； PDBConstruct 1–70； UniProt 1–70

Large ribosomal subunit protein eL39-like

OrganismNot specified

UniProt Q9CQD0

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain Ll； UniProt 1–51 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Ll 1–51（51 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
8PFR Mouse RPL39L integrated into the yeast 60S ribosomal subunit Deposited 2023-06-16 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 40 PDB declaration: 43-meric
Chain RN 1–51（51 aa）
Not recorded MG MAGNESIUM ION × 170 CL CHLORIDE ION × 24 SPM SPERMINE × 1 SPD SPERMIDINE × 1 ZN ZINC ION × 5 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.6；50mM Hepes pH 7.6, 200 mM KCl, 10 mM MgCl2, 5 mM EDTA, 2 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE-PROPANE；30s pre-blot incubation
Resolution 2.15 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Ll 1–51（51 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Ll 1–51（51 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Ll 1–51（51 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å

5 other PDB entries and 5 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL39L_MOUSE
Isoform —
PDB entities 40
Chains and sequence ranges Author chain Ll； PDBConstruct 1–51； UniProt 1–51

Ubiquitin-ribosomal protein eL40 fusion protein

OrganismNot specified

UniProt P62984

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain Lm； UniProt 1–128 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lm 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lm 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain g2 1–128（128 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different mutation/modification Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain g2 1–128（128 aa）
Non-standard monomer：Yes (specific site not provided by mmCIF) ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain g2 77–128（52 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lm 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Lm 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lm 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain g2 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain g2 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain g2 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain g2 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain g2 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain g2 1–128（128 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL40_MOUSE
Isoform —
PDB entities 41
Chains and sequence ranges Author chain Lm； PDBConstruct 1–128； UniProt 1–128

Small ribosomal subunit protein eS32

OrganismNot specified

UniProt P62947

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain Ln； UniProt 1–25 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain l 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Ln 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Ln 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain h2 1–25（25 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain h2 1–25（25 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain h2 1–24（24 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Ln 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Ln 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Ln 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain h2 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain h2 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain h2 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain h2 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain h2 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain h2 1–25（25 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS32_MOUSE
Isoform —
PDB entities 42
Chains and sequence ranges Author chain Ln； PDBConstruct 1–25； UniProt 1–25

Large ribosomal subunit protein eL42

OrganismNot specified

UniProt P83882

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain Lo； UniProt 1–106 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lo 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lo 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain i2 1–106（106 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain i2 1–106（106 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain i2 2–104（103 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lo 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Lo 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lo 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain i2 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain i2 1–104（104 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain i2 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain i2 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain i2 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain i2 1–106（106 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL36A_MOUSE
Isoform —
PDB entities 43
Chains and sequence ranges Author chain Lo； PDBConstruct 1–106； UniProt 1–106

Large ribosomal subunit protein eL43

OrganismNot specified

UniProt P61514

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain Lp； UniProt 1–92 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lp 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lp 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain j2 1–92（92 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain j2 1–92（92 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain j2 4–92（89 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lp 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Lp 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lp 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain j2 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain j2 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain j2 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain j2 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain j2 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain j2 1–92（92 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL37A_MOUSE
Isoform —
PDB entities 44
Chains and sequence ranges Author chain Lp； PDBConstruct 1–92； UniProt 1–92

Large ribosomal subunit protein eL28

OrganismNot specified

UniProt P41105

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain Lr； UniProt 1–137 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
6SWA Mus musculus brain neocortex ribosome 60S bound to Ebp1 Deposited 2019-09-20 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 43 PDB declaration: 46-meric
Chain p 2–123（122 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lr 1–137（137 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Lr 1–137（137 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain k2 1–137（137 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain k2 1–137（137 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain k2 2–126（125 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lr 1–137（137 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Lr 1–137（137 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Lr 1–137（137 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain k2 1–137（137 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain k2 1–137（137 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain k2 1–137（137 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain k2 1–137（137 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain k2 1–137（137 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain k2 1–137（137 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RL28_MOUSE
Isoform —
PDB entities 45
Chains and sequence ranges Author chain Lr； PDBConstruct 1–137； UniProt 1–137

Small ribosomal subunit protein uS2

OrganismNot specified

UniProt P14206

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain SA； UniProt 1–295 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SA 1–295（295 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SA 1–295（295 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain o2 1–295（295 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain o2 1–295（295 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain o2 3–216（214 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SA 1–295（295 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SA 1–295（295 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SA 1–295（295 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain o2 1–295（295 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain o2 1–295（295 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain o2 1–295（295 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain o2 1–295（295 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain o2 1–295（295 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain o2 1–295（295 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RSSA_MOUSE
Isoform —
PDB entities 48
Chains and sequence ranges Author chain SA； PDBConstruct 1–295； UniProt 1–295

Small ribosomal subunit protein eS1

OrganismNot specified

UniProt P97351

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain SB； UniProt 1–264 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SB 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SB 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain p2 1–264（264 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain p2 1–264（264 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
7NWI Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S Deposited 2021-03-16 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 78 PDB declaration: 84-meric
Chain BB 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 210 ZN ZINC ION × 5 BLS BLASTICIDIN S × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.4；50 mM HEPES pH 7.4 100 mM KOAc 5 mM Mg(Oac)2 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE；30s sample incubation on grid followed by 1.1s blotting time.
Resolution 3.13 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain p2 21–234（214 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SB 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SB 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SB 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain p2 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain p2 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain p2 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain p2 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain p2 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain p2 1–264（264 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

15 other PDB entries and 15 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS3A_MOUSE
Isoform —
PDB entities 49
Chains and sequence ranges Author chain SB； PDBConstruct 1–264； UniProt 1–264

Small ribosomal subunit protein uS5

OrganismNot specified

UniProt P25444

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain SC； UniProt 1–293 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SC 1–293（293 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SC 1–293（293 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain J3 1–293（293 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain J3 1–293（293 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain J3 59–280（222 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SC 1–293（293 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SC 1–293（293 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SC 1–293（293 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain J3 1–293（293 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain J3 1–293（293 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain J3 1–293（293 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain J3 1–293（293 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain J3 1–293（293 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain J3 1–293（293 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS2_MOUSE
Isoform —
PDB entities 50
Chains and sequence ranges Author chain SC； PDBConstruct 1–293； UniProt 1–293

Small ribosomal subunit protein uS3

OrganismNot specified

UniProt P62908

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain SD； UniProt 1–243 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SD 1–243（243 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SD 1–243（243 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain q2 1–243（243 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain q2 1–243（243 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain q2 2–227（226 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SD 1–243（243 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SD 1–243（243 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SD 1–243（243 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain q2 1–243（243 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain q2 1–243（243 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain q2 1–243（243 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain q2 1–243（243 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain q2 1–243（243 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain q2 1–243（243 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS3_MOUSE
Isoform —
PDB entities 51
Chains and sequence ranges Author chain SD； PDBConstruct 1–243； UniProt 1–243

Small ribosomal subunit protein eS4

OrganismNot specified

UniProt P62702

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain SE； UniProt 1–263 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SE 1–263（263 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SE 1–263（263 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain r2 1–263（263 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain r2 1–263（263 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain r2 2–263（262 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SE 1–263（263 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SE 1–263（263 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SE 1–263（263 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain r2 1–263（263 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain r2 1–263（263 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain r2 2–258（257 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain r2 2–258（257 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain r2 1–263（263 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

13 other PDB entries and 13 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS4X_MOUSE
Isoform —
PDB entities 52
Chains and sequence ranges Author chain SE； PDBConstruct 1–263； UniProt 1–263

Small ribosomal subunit protein uS7

OrganismNot specified

UniProt P97461

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain SF； UniProt 1–204 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain s2 1–204（204 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain s2 1–204（204 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SF 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SF 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SF 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain s2 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain s2 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain s2 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain s2 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain s2 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain s2 1–204（204 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

11 other PDB entries and 11 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS5_MOUSE
Isoform —
PDB entities 53
Chains and sequence ranges Author chain SF； PDBConstruct 1–204； UniProt 1–204

Small ribosomal subunit protein eS6

OrganismNot specified

UniProt P62754

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain SG； UniProt 1–249 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SG 1–249（249 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SG 1–249（249 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain K3 1–249（249 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain K3 1–249（249 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SG 1–249（249 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SG 1–249（249 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SG 1–249（249 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain K3 1–249（249 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain K3 1–249（249 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain K3 1–249（249 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain K3 1–249（249 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain K3 1–249（249 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain K3 1–249（249 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

13 other PDB entries and 13 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS6_MOUSE
Isoform —
PDB entities 54
Chains and sequence ranges Author chain SG； PDBConstruct 1–249； UniProt 1–249

Small ribosomal subunit protein eS7

OrganismNot specified

UniProt P62082

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain SH； UniProt 1–194 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SH 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SH 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain t 1–194（194 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain t 1–194（194 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
7QVP Human collided disome (di-ribosome) stalled on XBP1 mRNA Deposited 2022-01-22 Different construct Different mutation/modification Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 148 PDB declaration: 162-meric
Chain RH 1–194（194 aa）
Chain SH 1–194（194 aa）
Not recorded No recorded non-water small molecule ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.00 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SH 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SH 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SH 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain t2 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain t2 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain t2 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain t2 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain t2 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain t2 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS7_MOUSE
Isoform —
PDB entities 55
Chains and sequence ranges Author chain SH； PDBConstruct 1–194； UniProt 1–194

Small ribosomal subunit protein eS8

OrganismNot specified

UniProt P62242

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain SI； UniProt 1–208 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SI 1–208（208 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SI 1–208（208 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain u 1–208（208 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain u 1–208（208 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SI 1–208（208 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SI 1–208（208 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SI 1–208（208 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain u2 1–208（208 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain u2 1–208（208 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain u2 1–208（208 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain u2 1–208（208 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain u2 1–208（208 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain u2 1–208（208 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

13 other PDB entries and 13 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS8_MOUSE
Isoform —
PDB entities 56
Chains and sequence ranges Author chain SI； PDBConstruct 1–208； UniProt 1–208

Small ribosomal subunit protein uS4

OrganismNot specified

UniProt Q6ZWN5

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain SJ； UniProt 1–194 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SJ 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SJ 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain L3 1–194（194 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain L3 1–194（194 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain L3 2–186（185 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SJ 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SJ 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SJ 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain L3 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain L3 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain L3 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain L3 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain L3 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain L3 1–194（194 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS9_MOUSE
Isoform —
PDB entities 57
Chains and sequence ranges Author chain SJ； PDBConstruct 1–194； UniProt 1–194

Small ribosomal subunit protein eS10

OrganismNot specified

UniProt P63325

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain SK； UniProt 1–165 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SK 1–165（165 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SK 1–165（165 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain v2 1–165（165 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain v2 1–165（165 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SK 1–165（165 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SK 1–165（165 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SK 1–165（165 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain v2 1–165（165 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain v2 1–165（165 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain v2 1–165（165 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain v2 1–165（165 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain v2 1–165（165 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain v2 1–165（165 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

13 other PDB entries and 13 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS10_MOUSE
Isoform —
PDB entities 58
Chains and sequence ranges Author chain SK； PDBConstruct 1–165； UniProt 1–165

Small ribosomal subunit protein uS17

OrganismNot specified

UniProt P62281

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain SL； UniProt 1–158 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SL 1–158（158 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SL 1–158（158 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain w2 1–158（158 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain w2 1–158（158 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain w2 2–154（153 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SL 1–158（158 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SL 1–158（158 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SL 1–158（158 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain w2 1–158（158 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain w2 1–158（158 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain w2 1–158（158 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain w2 1–158（158 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain w2 1–158（158 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain w2 1–158（158 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS11_MOUSE
Isoform —
PDB entities 59
Chains and sequence ranges Author chain SL； PDBConstruct 1–158； UniProt 1–158

Small ribosomal subunit protein uS15

OrganismNot specified

UniProt P62301

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain SN； UniProt 1–151 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SN 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SN 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain N3 1–151（151 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain N3 1–151（151 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain N3 2–151（150 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SN 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SN 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SN 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain N3 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain N3 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain N3 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain N3 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain N3 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain N3 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS13_MOUSE
Isoform —
PDB entities 60
Chains and sequence ranges Author chain SN； PDBConstruct 1–151； UniProt 1–151

Small ribosomal subunit protein uS11

OrganismNot specified

UniProt P62264

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain SO； UniProt 1–151 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SO 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SO 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain O3 1–151（151 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain O3 1–151（151 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain O3 18–150（133 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SO 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SO 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SO 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain O3 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain O3 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain O3 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain O3 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain O3 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain O3 1–151（151 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS14_MOUSE
Isoform —
PDB entities 61
Chains and sequence ranges Author chain SO； PDBConstruct 1–151； UniProt 1–151

Small ribosomal subunit protein uS19

OrganismNot specified

UniProt P62843

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain SP； UniProt 1–145 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SP 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SP 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain x2 1–145（145 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain x2 1–145（145 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain x2 8–137（130 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SP 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SP 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SP 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain x2 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain x2 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain x2 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain x2 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain x2 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain x2 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS15_MOUSE
Isoform —
PDB entities 62
Chains and sequence ranges Author chain SP； PDBConstruct 1–145； UniProt 1–145

Small ribosomal subunit protein uS9

OrganismNot specified

UniProt P14131

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain SQ； UniProt 1–146 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SQ 1–146（146 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SQ 1–146（146 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain y2 1–146（146 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain y2 1–146（146 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain y2 3–146（144 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SQ 1–146（146 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SQ 1–146（146 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SQ 1–146（146 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain y2 1–146（146 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain y2 1–146（146 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain y2 1–146（146 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain y2 1–146（146 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain y2 1–146（146 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain y2 1–146（146 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS16_MOUSE
Isoform —
PDB entities 63
Chains and sequence ranges Author chain SQ； PDBConstruct 1–146； UniProt 1–146

Small ribosomal subunit protein eS17

OrganismNot specified

UniProt P63276

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain SR； UniProt 1–135 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SR 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SR 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain z2 1–135（135 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain z2 1–135（135 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SR 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SR 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SR 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain z2 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain z2 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain z2 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain z2 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain z2 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain z2 1–135（135 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

13 other PDB entries and 13 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS17_MOUSE
Isoform —
PDB entities 64
Chains and sequence ranges Author chain SR； PDBConstruct 1–135； UniProt 1–135

Small ribosomal subunit protein uS13

OrganismNot specified

UniProt P62270

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain SS； UniProt 1–152 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SS 1–152（152 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SS 1–152（152 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain A3 1–152（152 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain A3 1–152（152 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain A3 2–145（144 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SS 1–152（152 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SS 1–152（152 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SS 1–152（152 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain A3 1–152（152 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain A3 1–152（152 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain A3 1–152（152 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain A3 1–152（152 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain A3 1–152（152 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain A3 1–152（152 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS18_MOUSE
Isoform —
PDB entities 65
Chains and sequence ranges Author chain SS； PDBConstruct 1–152； UniProt 1–152

Small ribosomal subunit protein eS19

OrganismNot specified

UniProt Q9CZX8

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain ST； UniProt 1–145 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain ST 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain ST 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain B3 1–145（145 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain B3 1–145（145 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain B3 4–144（141 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain ST 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain ST 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain ST 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain B3 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain B3 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain B3 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain B3 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain B3 1–145（145 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

13 other PDB entries and 13 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS19_MOUSE
Isoform —
PDB entities 66
Chains and sequence ranges Author chain ST； PDBConstruct 1–145； UniProt 1–145

Small ribosomal subunit protein uS10

OrganismNot specified

UniProt P60867

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain SU； UniProt 1–119 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SU 1–119（119 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SU 1–119（119 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain C3 1–119（119 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain C3 1–119（119 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SU 1–119（119 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SU 1–119（119 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SU 1–119（119 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain C3 1–119（119 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain C3 1–119（119 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain C3 1–119（119 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain C3 1–119（119 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain C3 1–119（119 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain C3 1–119（119 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

13 other PDB entries and 13 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS20_MOUSE
Isoform —
PDB entities 67
Chains and sequence ranges Author chain SU； PDBConstruct 1–119； UniProt 1–119

Small ribosomal subunit protein eS21

OrganismNot specified

UniProt Q9CQR2

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain SV； UniProt 1–83 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SV 1–83（83 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SV 1–83（83 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain D3 1–83（83 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain D3 1–83（83 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain D3 1–83（83 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SV 1–83（83 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SV 1–83（83 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SV 1–83（83 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain D3 1–83（83 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain D3 1–83（83 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain D3 1–83（83 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain D3 1–83（83 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain D3 1–83（83 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

13 other PDB entries and 13 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS21_MOUSE
Isoform —
PDB entities 68
Chains and sequence ranges Author chain SV； PDBConstruct 1–83； UniProt 1–83

Small ribosomal subunit protein uS8

OrganismNot specified

UniProt P62245

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain SW； UniProt 1–130 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SW 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SW 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain P3 1–130（130 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain P3 1–130（130 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain P3 2–130（129 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SW 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SW 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SW 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain P3 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain P3 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain P3 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain P3 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain P3 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain P3 1–130（130 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS15A_MOUSE
Isoform —
PDB entities 69
Chains and sequence ranges Author chain SW； PDBConstruct 1–130； UniProt 1–130

Small ribosomal subunit protein uS12

OrganismNot specified

UniProt P62267

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain SX； UniProt 1–143 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SX 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SX 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain E3 1–143（143 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain E3 1–143（143 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain E3 2–142（141 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SX 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SX 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SX 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain E3 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain E3 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain E3 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain E3 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain E3 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain E3 1–143（143 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS23_MOUSE
Isoform —
PDB entities 70
Chains and sequence ranges Author chain SX； PDBConstruct 1–143； UniProt 1–143

Small ribosomal subunit protein eS24

OrganismNot specified

UniProt P62849

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain SY； UniProt 1–133 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SY 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SY 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Q3 1–133（133 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain Q3 1–133（133 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain Q3 2–130（129 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SY 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SY 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SY 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain Q3 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain Q3 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Q3 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Q3 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain Q3 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain Q3 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS24_MOUSE
Isoform —
PDB entities 71
Chains and sequence ranges Author chain SY； PDBConstruct 1–133； UniProt 1–133

Small ribosomal subunit protein eS25

OrganismNot specified

UniProt P62852

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain SZ； UniProt 1–125 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SZ 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain SZ 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain R3 1–125（125 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain R3 1–125（125 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SZ 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain SZ 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain SZ 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain R3 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain R3 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain R3 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain R3 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain R3 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain R3 1–125（125 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

13 other PDB entries and 13 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS25_MOUSE
Isoform —
PDB entities 72
Chains and sequence ranges Author chain SZ； PDBConstruct 1–125； UniProt 1–125

Small ribosomal subunit protein eS26

OrganismNot specified

UniProt P62855

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain Sa； UniProt 1–115 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Sa 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Sa 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain F3 1–115（115 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain F3 1–115（115 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain F3 2–98（97 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Sa 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Sa 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Sa 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain F3 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain F3 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain F3 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain F3 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain F3 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain F3 1–115（115 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS26_MOUSE
Isoform —
PDB entities 73
Chains and sequence ranges Author chain Sa； PDBConstruct 1–115； UniProt 1–115

Small ribosomal subunit protein eS27

OrganismNot specified

UniProt Q6ZWU9

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain Sb； UniProt 1–84 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Sb 1–84（84 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Sb 1–84（84 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Sb 1–84（84 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Sb 1–84（84 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Sb 1–84（84 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain S3 1–84（84 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain S3 1–84（84 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain S3 1–84（84 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain S3 1–84（84 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain S3 1–84（84 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain S3 1–84（84 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

11 other PDB entries and 11 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS27_MOUSE
Isoform —
PDB entities 74
Chains and sequence ranges Author chain Sb； PDBConstruct 1–84； UniProt 1–84

Small ribosomal subunit protein eS28

OrganismNot specified

UniProt P62858

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain Sc； UniProt 1–69 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Sc 1–69（69 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Sc 1–69（69 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain G3 1–69（69 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain G3 1–69（69 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Sc 1–69（69 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Sc 1–69（69 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Sc 1–69（69 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain G3 1–69（69 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain G3 1–69（69 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain G3 1–69（69 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain G3 1–69（69 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain G3 1–69（69 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain G3 1–69（69 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

13 other PDB entries and 13 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS28_MOUSE
Isoform —
PDB entities 75
Chains and sequence ranges Author chain Sc； PDBConstruct 1–69； UniProt 1–69

Small ribosomal subunit protein uS14

OrganismNot specified

UniProt P62274

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain Sd； UniProt 1–56 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Sd 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Sd 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain H3 1–56（56 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain H3 1–56（56 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9H4N RPL13 (eL13)-mutant 80S ribosome from mouse Deposited 2024-10-21 Different construct Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 70 PDB declaration: 76-meric
Chain H3 3–56（54 aa）
Not recorded ZN ZINC ION × 6 MG MAGNESIUM ION × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；1,2 second blotting
Resolution 2.46 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Sd 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Sd 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Sd 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain H3 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain H3 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain H3 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain H3 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain H3 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain H3 1–56（56 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

14 other PDB entries and 14 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS29_MOUSE
Isoform —
PDB entities 76
Chains and sequence ranges Author chain Sd； PDBConstruct 1–56； UniProt 1–56

Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein

OrganismNot specified

UniProt P62862

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain Se； UniProt 1–133 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Small ribosomal subunit protein RACK1 × 1 （P68040） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Se 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Se 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Se 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain T3 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain T3 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain T3 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain T3 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain T3 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain T3 1–133（133 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

9 other PDB entries and 9 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RS30_MOUSE
Isoform —
PDB entities 77
Chains and sequence ranges Author chain Se； PDBConstruct 1–133； UniProt 1–133

Small ribosomal subunit protein RACK1

OrganismNot specified

UniProt P68040

State in the Current Structure

Assembly Oligomeric State Construct Mutations and Modifications Ligands, Ions and Associated Components Method and Experimental Conditions Structure Quality
1 Protein–RNA Heteromer Protein × 74 RNA 7 PDB declaration: 81-meric（81） Consistent with all polymer counts Chain Sg； UniProt 1–317 Not recorded Mus musculus 28S ribosomal RNA × 1 Mus musculus 5S ribosomal RNA × 1 Mus musculus 5.8S ribosomal RNA × 1 Large ribosomal subunit protein uL2 × 1 （P62918） Large ribosomal subunit protein uL3 × 1 （P27659） Large ribosomal subunit protein uL4 × 1 （Q9D8E6） Large ribosomal subunit protein uL18 × 1 （P47962） Large ribosomal subunit protein eL6 × 1 （P47911） Large ribosomal subunit protein uL30 × 1 （P14148） Large ribosomal subunit protein eL8 × 1 （P12970） Large ribosomal subunit protein uL6 × 1 （P51410） Large ribosomal subunit protein uL16-like × 1 （P86048） Large ribosomal subunit protein uL5 × 1 （Q9CXW4） Large ribosomal subunit protein eL13 × 1 （P47963） Large ribosomal subunit protein eL14 × 1 （Q9CR57） Large ribosomal subunit protein eL15 × 1 （Q9CZM2） Large ribosomal subunit protein uL13 × 1 （P19253） Large ribosomal subunit protein uL22 × 1 （Q9CPR4） Large ribosomal subunit protein eL18 × 1 （P35980） Large ribosomal subunit protein eL19 × 1 （P84099） Large ribosomal subunit protein eL20 × 1 （P62717） Large ribosomal subunit protein eL21 × 1 （O09167） Large ribosomal subunit protein eL22 × 1 （P67984） Large ribosomal subunit protein uL14 × 1 （P62830） Large ribosomal subunit protein eL24 × 1 （Q8BP67） Large ribosomal subunit protein uL23 × 1 （P62751） Large ribosomal subunit protein uL24 × 1 （P61255） Large ribosomal subunit protein eL27 × 1 （P61358） Large ribosomal subunit protein uL15 × 1 （P14115） Large ribosomal subunit protein eL29 × 1 （P47915） Large ribosomal subunit protein eL30 × 1 （P62889） Large ribosomal subunit protein eL31 × 1 （P62900） Large ribosomal subunit protein eL32 × 1 （P62911） Large ribosomal subunit protein eL33 × 1 （O55142） Large ribosomal subunit protein eL34 × 1 （Q9D1R9） Large ribosomal subunit protein uL29 × 1 （Q6ZWV7） Large ribosomal subunit protein eL36 × 1 （P47964） Large ribosomal subunit protein eL37 × 1 （Q9D823） Large ribosomal subunit protein eL38 × 1 （Q9JJI8） Large ribosomal subunit protein eL39-like × 1 （Q9CQD0） Ubiquitin-ribosomal protein eL40 fusion protein × 1 （P62984） Small ribosomal subunit protein eS32 × 1 （P62947） Large ribosomal subunit protein eL42 × 1 （P83882） Large ribosomal subunit protein eL43 × 1 （P61514） Large ribosomal subunit protein eL28 × 1 （P41105） Mus musculus 18S ribosomal RNA × 1 A/P, P/E tRNA × 2 Small ribosomal subunit protein uS2 × 1 （P14206） Small ribosomal subunit protein eS1 × 1 （P97351） Small ribosomal subunit protein uS5 × 1 （P25444） Small ribosomal subunit protein uS3 × 1 （P62908） Small ribosomal subunit protein eS4 × 1 （P62702） Small ribosomal subunit protein uS7 × 1 （P97461） Small ribosomal subunit protein eS6 × 1 （P62754） Small ribosomal subunit protein eS7 × 1 （P62082） Small ribosomal subunit protein eS8 × 1 （P62242） Small ribosomal subunit protein uS4 × 1 （Q6ZWN5） Small ribosomal subunit protein eS10 × 1 （P63325） Small ribosomal subunit protein uS17 × 1 （P62281） Small ribosomal subunit protein uS15 × 1 （P62301） Small ribosomal subunit protein uS11 × 1 （P62264） Small ribosomal subunit protein uS19 × 1 （P62843） Small ribosomal subunit protein uS9 × 1 （P14131） Small ribosomal subunit protein eS17 × 1 （P63276） Small ribosomal subunit protein uS13 × 1 （P62270） Small ribosomal subunit protein eS19 × 1 （Q9CZX8） Small ribosomal subunit protein uS10 × 1 （P60867） Small ribosomal subunit protein eS21 × 1 （Q9CQR2） Small ribosomal subunit protein uS8 × 1 （P62245） Small ribosomal subunit protein uS12 × 1 （P62267） Small ribosomal subunit protein eS24 × 1 （P62849） Small ribosomal subunit protein eS25 × 1 （P62852） Small ribosomal subunit protein eS26 × 1 （P62855） Small ribosomal subunit protein eS27 × 1 （Q6ZWU9） Small ribosomal subunit protein eS28 × 1 （P62858） Small ribosomal subunit protein uS14 × 1 （P62274） Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein × 1 （P62862） ;RNA (5'-R(P*AP*UP*CP*AP*UP*GP*AP*AP*GP*U)-3') ; × 1 Nascent peptide × 1 MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY cryo-EM buffer：pH 7.5 cryo-EM vitrification conditions：Cryogen ETHANE Resolution 2.67 Å

Other States of the Same Protein in the Database

Each row is a biological assembly of the same UniProt protein in another PDB entry. The “Difference from current entry” column identifies evidence-level differences; no tag means the currently parsed fields agree.

Other PDB Difference from Current Entry 9KDW Assembly / Oligomeric State Construct Mutations and Modifications Ligands, Ions and Non-polymers Method and Experimental Conditions Structure Quality
7CPU Cryo-EM structure of 80S ribosome from mouse kidney Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Sg 1–317（317 aa）
Not recorded MG MAGNESIUM ION × 271 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.82 Å
7CPV Cryo-EM structure of 80S ribosome from mouse testis Deposited 2020-08-08 Different oligomeric state Different ligand/ion Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 73 PDB declaration: 78-meric
Chain Sg 1–317（317 aa）
Not recorded MG MAGNESIUM ION × 247 ZN ZINC ION × 7 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.03 Å
7LS1 80S ribosome from mouse bound to eEF2 (Class II) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain I3 1–317（317 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.30 Å
7LS2 80S ribosome from mouse bound to eEF2 (Class I) Deposited 2021-02-17 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 80 PDB declaration: 85-meric
Chain I3 1–317（317 aa）
Not recorded ZN ZINC ION × 7 MG MAGNESIUM ION × 1 GDP GUANOSINE-5'-DIPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE；3 second blotting, force 3
Resolution 3.10 Å
9KDT Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Sg 1–317（317 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.63 Å
9KDU Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different oligomeric state Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 80-meric
Chain Sg 1–317（317 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.96 Å
9KDV Cryo-EM structure of 80S ribosome Deposited 2024-11-04 Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 74 PDB declaration: 81-meric
Chain Sg 1–317（317 aa）
Not recorded MG MAGNESIUM ION × 97 ZN ZINC ION × 3 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.33 Å
9QOH Mouse Ribosome POST translocation state Deposited 2025-03-26 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 83-meric
Chain I3 1–317（317 aa）
Not recorded MG MAGNESIUM ION × 122 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.78 Å
9QQL Mouse RPS15 P131 Mutant Ribosome POST translocation state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 76 PDB declaration: 83-meric
Chain I3 1–317（317 aa）
Not recorded MG MAGNESIUM ION × 122 UNK UNKNOWN × 22 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.09 Å
9QQP Mouse Ribosome rotated-2 PRE state Deposited 2025-04-01 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain I3 1–317（317 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 2.80 Å
9QSA Mouse Ribosome rotated-1 PRE state Deposited 2025-04-04 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain I3 1–317（317 aa）
Not recorded MG MAGNESIUM ION × 117 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM HEPES pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.40 Å
9QWT Mouse Ribosome RPS15 (uS19) P131S rotated-2 PRE state Deposited 2025-04-15 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 75 PDB declaration: 82-meric
Chain I3 1–317（317 aa）
Not recorded MG MAGNESIUM ION × 123 ZN ZINC ION × 6 B8N (2~{R})-2-azanyl-4-[5-[(2~{S},3~{R},4~{S},5~{R})-3,4-bis(oxidanyl)-5-(phosphonooxymethyl)oxolan-2-yl]-3-methyl-2,6-bis(oxidanylidene)pyrimidin-1-yl]butanoic acid × 1 4AC N(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE × 1 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.10 Å
9QZP Mouse Ribosome Classical Pre translocation state Deposited 2025-04-23 Different oligomeric state Different ligand/ion Different experimental conditions Different structure-quality metrics Assembly 1 Protein–RNA Heteromer；Protein × 77 PDB declaration: 85-meric
Chain I3 1–317（317 aa）
Not recorded MG MAGNESIUM ION × 118 ZN ZINC ION × 6 ELECTRON MICROSCOPY
cryo-EM buffer pH 7.5；20 mM Hepes pH 7.5, 150 mM NaCl, 10 mM MgCl2, 1 mM DTT
cryo-EM vitrification conditions Cryogen ETHANE
Resolution 3.43 Å

13 other PDB entries and 13 assemblies. Open the comparison page and filter oligomeric states

View Construct and Data Evidence
UniProt name RACK1_MOUSE
Isoform —
PDB entities 78
Chains and sequence ranges Author chain Sg； PDBConstruct 1–317； UniProt 1–317

The page prioritizes protein identity, the current assembly, associated components, oligomeric state and cross-PDB links. Chain mapping and sequence ranges are retained as data evidence. Internal IDs, import timestamps and assembly operation expressions are maintenance fields and are not shown here.

SAXS scattering curve SAXS Profile

SAXS profile for 9kdw

P(r) Distance Distribution P(r) Distribution

P(r) distribution for 9kdw
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2. Structure Basics 2. Structure Basics

Entry ID entry_id9kdw
Deposition date deposition_date2024-11-04
Structure title titleCryo-EM structure of 80S ribosome
Keywords keywordsNative 80S ribosome, RIBOSOME; RIBOSOME
Experimental Method methodELECTRON MICROSCOPY
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3. SAXS Parameters (CRYSOL theoretical calculation) 3. SAXS Parameters (CRYSOL)

Radius of gyration Rg (Guinier) rg_guinier94.55 Å
Radius of gyration Rg (electron density) rg_electron95.99 Å
Forward intensity I(0) i0260576000000.00
Molecular weight molecular_weight3014500.0 kDa
Excluded volume excluded_volume3218200 ų
Envelope volume envelope_volume5747700 ų
Hydration-shell volume shell_volume454000 ų
Envelope diameter envelope_diameter323.1 Å
Shell Rg shell_rg111.90 Å
Envelope Rg envelope_rg94.81 Å
Shape Rg shape_rg96.07 Å
Total Rg total_rg95.85 Å
Total atoms total_atoms204125
Residues n_residues16282
Spherical-harmonic order n_harmonics20
q range q_range— – 0.5000 Å−1
Data points n_points101
Shell type shell_typedirectional
Solvent electron density solvent_density0.3340 e/ų
Shell contrast contrast_shell0.0300 e/ų
CRYSOL version crysol_version4.1.3
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4. P(r) Distance Distribution (GNOM inversion) 4. P(r) Analysis (GNOM)

Maximum dimension Dmax dmax243.2 Å
Rg (real space) rg_real91.84 Å
Rg uncertainty (real space) rg_real_error0.31 Å
I(0) (real space) i0_real2.4980e+11
I(0) uncertainty (real space) i0_real_error4.0320e+09
Rg (reciprocal space) rg_reciprocal96.24 Å
I(0) (reciprocal space) i0_reciprocal262000000000.0000
Solution quality estimate total_estimate0.9112
Solution quality rating solution_quality EXCELLENT a EXCELLENT solution
P(r) peaks n_peaks1
Primary peak position r_peak_primary106.4 Å
Skewness Skewness skewness0.108
Kurtosis Kurtosis kurtosis-0.612
Angular range angular_range— – 0.0800 Å−1
Current regularization parameter α current_alpha0.7950
Highest regularization parameter α highest_alpha20130000000.0000
Real-space data points n_real_points17
GNOM version gnom_version4.1.3
Quality Criteria quality_criteria AN1: 0.000; Oscil: 1.000; Stabil: 0.951; Sysdev: 1.000; Positv: 1.000; Valcen: 0.993; Smooth: 0.000
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5. Crystallography and Experiment 5. Crystallography & Experiment

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6. Entities and Polymers Entities & Polymers (82)

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8. Citations (1)

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9. Files and Curves (10)