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9qsj

Cryo-EM structure of SKM-70S ribosomal stalled complex in the A-tRNA positioned (Body open) state.

Method: ELECTRON MICROSCOPY Dmax: 291.9 Å Quality: EXCELLENT

SAXS Profile

SAXS profile for 9qsj

P(r) Distribution

P(r) distribution for 9qsj

1. Structure Basics

entry_id9qsj
deposition_date2025-04-05
titleCryo-EM structure of SKM-70S ribosomal stalled complex in the A-tRNA positioned (Body open) state.
keywordsAntibiotics, 70S complex, Body closure, Accomodation, RIBOSOME; RIBOSOME
methodELECTRON MICROSCOPY

Download Data

2. SAXS Parameters (CRYSOL)

rg_guinier82.84
rg_electron83.11
i0204545000000.00
molecular_weight1994500.0 kDa
excluded_volume1627100 ų
envelope_volume3654600 ų
shell_volume335350 ų
envelope_diameter276.5
shell_rg96.77
envelope_rg82.01
shape_rg83.34
total_rg82.88
total_atoms140975
n_residues10024
n_harmonics20
q_range— – 0.5000 −1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3

3. P(r) Analysis (GNOM)

dmax291.9
rg_real85.27
rg_real_error1.38
i0_real2.0330e+11
i0_real_error3.9480e+09
rg_reciprocal84.05
i0_reciprocal205300000000.0000
total_estimate0.9058
solution_quality EXCELLENT a EXCELLENT solution
n_peaks2
r_peak_primary107.5
skewness0.395
kurtosis0.056
angular_range— – 0.0950 −1
current_alpha1.1520
highest_alpha10480000000.0000
n_real_points20
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.778; Stabil: 0.906; Sysdev: 1.000; Positv: 1.000; Valcen: 0.965; Smooth: 0.772

4. Crystallography & Experiment

5. Entities & Polymer Info (59)

6. Citations (1)

7. Files & Curves (10)