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9r9p

Yeast 80S with nascent chain in complex with Ssb1-ADP in the S2 state

Method: ELECTRON MICROSCOPY Dmax: 234.8 Å Quality: EXCELLENT

SAXS Profile

SAXS profile for 9r9p

P(r) Distribution

P(r) distribution for 9r9p

1. Structure Basics

entry_id9r9p
deposition_date2025-05-20
titleYeast 80S with nascent chain in complex with Ssb1-ADP in the S2 state
keywordsHsp70, nascent chain, 80S, Ssb, RIBOSOME; RIBOSOME
methodELECTRON MICROSCOPY

Download Data

2. SAXS Parameters (CRYSOL)

rg_guinier91.96
rg_electron93.68
i0231274000000.00
molecular_weight2868700.0 kDa
excluded_volume3078600 ų
envelope_volume5333700 ų
shell_volume430720 ų
envelope_diameter310.8
shell_rg109.90
envelope_rg92.45
shape_rg93.80
total_rg93.47
total_atoms339215
n_residues16061
n_harmonics20
q_range— – 0.5000 −1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3

3. P(r) Analysis (GNOM)

dmax234.8
rg_real89.63
rg_real_error0.29
i0_real2.2110e+11
i0_real_error3.4130e+09
rg_reciprocal93.68
i0_reciprocal232500000000.0000
total_estimate0.9074
solution_quality EXCELLENT a EXCELLENT solution
n_peaks1
r_peak_primary110.5
skewness0.084
kurtosis-0.651
angular_range— – 0.0850 −1
current_alpha1.1840
highest_alpha15930000000.0000
n_real_points18
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 0.999; Stabil: 0.946; Sysdev: 1.000; Positv: 1.000; Valcen: 0.964; Smooth: 0.000

4. Crystallography & Experiment

5. Entities & Polymer Info (79)

6. Citations (1)

7. Files & Curves (10)