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9rvu

in situ S. pombe hibernating ribosome after 7 days of glucose depletion

Method: ELECTRON MICROSCOPY Dmax: 237.9 Å Quality: EXCELLENT

SAXS Profile

SAXS profile for 9rvu

P(r) Distribution

P(r) distribution for 9rvu

1. Structure Basics

entry_id9rvu
deposition_date2025-07-09
titlein situ S. pombe hibernating ribosome after 7 days of glucose depletion
keywordsRIBOSOME, SNOR, pombe, Yeast, Hibernating, Glucose, Cryo-ET, in-situ; RIBOSOME
methodELECTRON MICROSCOPY

Download Data

2. SAXS Parameters (CRYSOL)

rg_guinier93.19
rg_electron94.35
i0261889000000.00
molecular_weight3085300.0 kDa
excluded_volume3330200 ų
envelope_volume5809000 ų
shell_volume465440 ų
envelope_diameter320.9
shell_rg112.10
envelope_rg93.01
shape_rg94.43
total_rg94.23
total_atoms209623
n_residues17578
n_harmonics20
q_range— – 0.5000 −1
n_points101
shell_typedirectional
solvent_density0.3340 e/ų
contrast_shell0.0300 e/ų
crysol_version4.1.3

3. P(r) Analysis (GNOM)

dmax237.9
rg_real90.66
rg_real_error0.33
i0_real2.5030e+11
i0_real_error4.4740e+09
rg_reciprocal95.09
i0_reciprocal263500000000.0000
total_estimate0.9106
solution_quality EXCELLENT a EXCELLENT solution
n_peaks1
r_peak_primary112.0
skewness0.088
kurtosis-0.615
angular_range— – 0.0850 −1
current_alpha1.0120
highest_alpha20410000000.0000
n_real_points18
gnom_version4.1.3
quality_criteria AN1: 0.000; Oscil: 1.000; Stabil: 0.958; Sysdev: 1.000; Positv: 1.000; Valcen: 0.973; Smooth: 0.000

4. Crystallography & Experiment

5. Entities & Polymer Info (84)

6. Citations (1)

7. Files & Curves (10)