SARM1 TIR with BEXi adduct 17

Method: ELECTRON MICROSCOPY D_max: 84.3 Å Quality: EXCELLENT

SAXS Profile

P(r) Distribution

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1. Structure Basics

entry_id	9tzy
deposition_date	2026-01-25
title	SARM1 TIR with BEXi adduct 17
keywords	Nad+, Hydrolase, SARM1, TIR; HYDROLASE
method	ELECTRON MICROSCOPY

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Download Data

SAXS curve (.dat) P(r) distribution (.pr.out) Structure (CIF)

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2. SAXS Parameters (CRYSOL)

rg_guinier	27.18 Å
rg_electron	26.02 Å
i0	66985100.00
molecular_weight	65350.0 kDa
excluded_volume	82284 Å³
envelope_volume	97864 Å³
shell_volume	30752 Å³
envelope_diameter	89.1 Å
shell_rg	33.86 Å
envelope_rg	25.94 Å
shape_rg	25.94 Å
total_rg	27.15 Å
total_atoms	9108
n_residues	552
n_harmonics	20
q_range	— – 0.5000 Å⁻¹
n_points	101
shell_type	directional
solvent_density	0.3340 e/Å³
contrast_shell	0.0300 e/Å³
crysol_version	4.1.3

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3. P(r) Analysis (GNOM)

dmax	84.3 Å
rg_real	27.05 Å
rg_real_error	0.51 Å
i0_real	6.6990e+07
i0_real_error	8.4840e+05
rg_reciprocal	27.09 Å
i0_reciprocal	66990000.0000
total_estimate	0.9112
solution_quality	EXCELLENT a EXCELLENT solution
n_peaks	2
r_peak_primary	33.4 Å
skewness	0.141
kurtosis	-0.608
angular_range	— – 0.2900 Å⁻¹
current_alpha	0.0000
highest_alpha	28300000.0000
n_real_points	59
gnom_version	4.1.3
quality_criteria	AN1: 0.000; Oscil: 0.948; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.998; Smooth: 0.998

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4. Crystallography & Experiment

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5. Entities & Polymer Info (2)

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6. Citations (1)

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length_a	1.000 Å
length_b	1.000 Å
length_c	1.000 Å
angle_alpha	90.00 °
angle_beta	90.00 °
angle_gamma	90.00 °
z_pdb	—

space_group	P 1
int_tables_number	1
crystal_system	—

resolution	2.940 Å
resolution_low	— Å
r_factor	—
r_work	—
r_free	—

resolution	2.94 Å
resolution_method	—
num_particles	2643954

description	NAD(+) hydrolase SARM1
formula_weight	16148.5 kDa
ec_number	3.2.2.6,3.2.2.-
src_method	man
entity_count	4

SARM1 TIR with BEXi adduct 17

SAXS Profile

P(r) Distribution

1. Structure Basics

Download Data

2. SAXS Parameters (CRYSOL)

3. P(r) Analysis (GNOM)

4. Crystallography & Experiment

Unit Cell

Symmetry

Refinement

EM 3D

5. Entities & Polymer Info (2)

Entity 1 polymer

Polymer

Source

Entity 2 non-polymer

6. Citations (1)

7. Files & Curves (10)

Files (7)

Curves (3)

organism	Homo sapiens
common_name	human
ncbi_taxonomy_id	9606
host_organism	Escherichia coli

description	;[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-[3-[(1~{S})-1-[4-[[2,2-bis(fluoranyl)-2-[(3~{R})-oxolan-3-yl]ethanoyl]amino]phenyl]ethyl]-2-methyl-imidazol-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate ;
formula_weight	891.7 kDa
src_method	syn
entity_count	4

fit	/app/data/saxs_computation/tz/9tzy/9tzy.fit
pddf	/app/data/pr_computation/tz/9tzy/9tzy.pr.out
profile	/app/data/saxs_computation/tz/9tzy/9tzy.dat

type	polypeptide(L)
strand_id	A,C,D,B
atom_count	9108