9v3d
SFX structure of 3-5 micrometers Lysozyme microcrystals
SAXS Profile
P(r) Distribution
1. Structure Basics
| entry_id | 9v3d |
| deposition_date | 2025-05-21 |
| title | SFX structure of 3-5 micrometers Lysozyme microcrystals |
| keywords | Time-resolved XFEL SFX, Lysozyme, HYDROLASE; HYDROLASE |
| method | X-RAY DIFFRACTION |
Download Data
2. SAXS Parameters (CRYSOL)
| rg_guinier | 15.21 Å |
| rg_electron | 13.92 Å |
| i0 | 4699460.00 |
| molecular_weight | 14342.0 kDa |
| excluded_volume | 17425 ų |
| envelope_volume | 19396 ų |
| shell_volume | 11970 ų |
| envelope_diameter | 50.9 Å |
| shell_rg | 19.54 Å |
| envelope_rg | 14.21 Å |
| shape_rg | 13.90 Å |
| total_rg | 15.03 Å |
| total_atoms | 999 |
| n_residues | 129 |
| n_harmonics | 20 |
| q_range | — – 0.5000 Å−1 |
| n_points | 101 |
| shell_type | directional |
| solvent_density | 0.3340 e/ų |
| contrast_shell | 0.0300 e/ų |
| crysol_version | 4.1.3 |
3. P(r) Analysis (GNOM)
| dmax | 50.9 Å |
| rg_real | 15.14 Å |
| rg_real_error | 0.28 Å |
| i0_real | 4.6990e+06 |
| i0_real_error | 5.8290e+04 |
| rg_reciprocal | 15.15 Å |
| i0_reciprocal | 4699000.0000 |
| total_estimate | 0.8731 |
| solution_quality | GOOD a GOOD solution |
| n_peaks | 2 |
| r_peak_primary | 20.0 Å |
| skewness | 0.227 |
| kurtosis | -0.224 |
| angular_range | — – 0.5000 Å−1 |
| current_alpha | 0.0000 |
| highest_alpha | 824400.0000 |
| n_real_points | 80 |
| gnom_version | 4.1.3 |
| quality_criteria | AN1: 0.000; Oscil: 0.786; Stabil: 1.000; Sysdev: 1.000; Positv: 1.000; Valcen: 0.998; Smooth: 0.991 |